| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,460,468 | T→C | 5.3% | K90K (AAA→AAG) | tufB ← | protein chain elongation factor EF‑Tu |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,460,468 | 0 | T→C | 5.3% | 17.9 ‑0.7 ‑0.0 | 169 | K90K (AAA→AAG) | tufB | protein chain elongation factor EF‑Tu |
| Reads supporting (aligned to +/- strand): new base (3/6): ref base (76/84): total (79/90) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.05e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.94e-01 | ||||||||||
Only 100 of 183 total aligned reads displayed.
GACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTG > NC_007779/3460368‑3460546 | gacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGttt > 1:402561/1‑101 (MQ=32) acCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGtttt > 1:5652892/1‑101 (MQ=32) acCCAGAACGATGTGCTCCCGAGCCTGCGGCATAGGGCCGTCCGTCACAGCAACTACCAGGATCGCGCCGTCCATCTGCGCACCACCGGCGATCATGtttt > 1:92455/1‑101 (MQ=11) cccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGttttt < 1:3579936/101‑1 (MQ=33) cccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGttttt < 1:10884347/101‑1 (MQ=33) cccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGttttt > 1:11317760/1‑101 (MQ=32) ccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTa < 1:2887885/101‑1 (MQ=32) ccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTa < 1:11091314/101‑1 (MQ=33) agcagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAAc < 1:7459210/101‑1 (MQ=33) cagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACAt < 1:6865150/101‑1 (MQ=32) agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATa > 1:3255761/1‑101 (MQ=32) agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATa > 1:12032080/1‑101 (MQ=32) agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATa > 1:6945642/1‑101 (MQ=32) ggATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAg < 1:12706079/101‑1 (MQ=33) gATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGt > 1:8738010/1‑101 (MQ=32) gATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGt > 1:10679241/1‑101 (MQ=32) acgtgCTCACGGGTCTGCGGCATCGGACCGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTc < 1:6163981/99‑1 (MQ=2) aTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTc < 1:13158181/101‑1 (MQ=32) aTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTc < 1:9888633/101‑1 (MQ=33) gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCgg < 1:11589702/101‑1 (MQ=33) gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCgg > 1:2546752/1‑101 (MQ=32) gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCgg > 1:2988765/1‑101 (MQ=32) tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc < 1:10357599/101‑1 (MQ=33) tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc > 1:13185107/1‑101 (MQ=32) gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg > 1:11800580/1‑101 (MQ=32) aCGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGcc > 1:5525466/1‑101 (MQ=32) cGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGccc > 1:6324205/1‑101 (MQ=32) aGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg < 1:2669324/101‑1 (MQ=33) aGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg < 1:4584020/101‑1 (MQ=33) aGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg < 1:9956199/101‑1 (MQ=32) gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg > 1:3376813/1‑101 (MQ=32) gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg > 1:7240208/1‑101 (MQ=32) gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCACAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg < 1:1690314/101‑1 (MQ=17) cTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑Gc > 1:235966/1‑101 (MQ=32) tGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCa < 1:12575028/101‑1 (MQ=32) gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAg < 1:5607472/101‑1 (MQ=32) cGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGt > 1:2099465/1‑101 (MQ=32) ggCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTc < 1:5268473/101‑1 (MQ=32) gCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCt > 1:11973234/1‑101 (MQ=32) cATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTa > 1:9632320/1‑101 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc > 1:6049009/1‑101 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc > 1:10044827/1‑101 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc > 1:10990511/1‑101 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc > 1:2786718/1‑101 (MQ=32) gggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtg > 1:10560462/1‑101 (MQ=32) gggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtg > 1:3866483/1‑101 (MQ=32) ggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtgt > 1:567483/1‑101 (MQ=32) ggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtgt > 1:4938258/1‑101 (MQ=33) ggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtgt < 1:9676453/101‑1 (MQ=32) ccGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGc < 1:5994236/101‑1 (MQ=32) ccGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGc < 1:8498401/101‑1 (MQ=32) gTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGC‑GTCGACGTGAGCGt < 1:14272871/101‑1 (MQ=2) gTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGC‑GTCGACGTGAGCGt < 1:1930463/101‑1 (MQ=2) gTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGt > 1:451005/1‑101 (MQ=33) cAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAg > 1:520318/1‑101 (MQ=33) gTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTg > 1:10356912/1‑101 (MQ=33) tCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGa > 1:653985/1‑101 (MQ=33) cGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGAc < 1:12279814/101‑1 (MQ=32) cagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACgg < 1:3667268/101‑1 (MQ=32) cagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACgg < 1:5178784/101‑1 (MQ=32) cagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACgg > 1:9556816/1‑101 (MQ=33) agcaACTACCAGGATCGCGCCGTCCATCTGCGAAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACggg > 1:387044/1‑101 (MQ=18) aaCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCg < 1:8810451/101‑1 (MQ=32) aCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCgg > 1:9056283/1‑101 (MQ=32) aCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCgg < 1:10298508/101‑1 (MQ=32) cTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCggg < 1:13602619/101‑1 (MQ=32) tACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCgggg > 1:1879708/1‑101 (MQ=32) aCCAGGCTCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GGAGTCTACGTGTGCGTAGTGACGGGTCGGGgt < 1:14186154/101‑1 (MQ=12) aCCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCggggg > 1:2460752/1‑100 (MQ=18) ccAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgtg < 1:13894883/101‑1 (MQ=32) ccAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgtg > 1:7291495/1‑101 (MQ=33) cAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgtgt > 1:12946873/1‑101 (MQ=33) cAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgtgt < 1:11511272/101‑1 (MQ=32) aGGATCGCGCCGTCCCTCTGCGCCGCCCCGGGGATCATGTTTTTTAAATAGTCGGCGTGGCCCCG‑GCAGTCTACGTGTGCGGAGTGGCGGGGCGGGGGGTc > 1:5045515/1‑101 (MQ=11) aGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTc < 1:7885177/101‑1 (MQ=32) ggATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCg < 1:4435006/101‑1 (MQ=32) ggATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCg < 1:3115673/101‑1 (MQ=32) ggATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCg < 1:6741723/101‑1 (MQ=32) ggATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGCCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTca < 1:6368909/101‑2 (MQ=17) aTCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTa > 1:824337/1‑101 (MQ=33) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt > 1:5286958/1‑101 (MQ=33) cgcgCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAtt > 1:8858557/1‑101 (MQ=33) cgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCa < 1:8158571/101‑1 (MQ=32) cgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCa < 1:8644721/101‑1 (MQ=32) gcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaa < 1:6633066/101‑1 (MQ=32) gcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaa < 1:4549305/101‑1 (MQ=32) ccGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAAc > 1:4667035/1‑101 (MQ=32) ccGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAAc > 1:12512848/1‑101 (MQ=32) ccGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAAc > 1:939454/1‑101 (MQ=2) cGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACg < 1:5751023/101‑1 (MQ=32) cGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACg < 1:6194000/101‑1 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt < 1:6706818/101‑1 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt > 1:12308883/1‑101 (MQ=32) tCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTg < 1:13140131/101‑1 (MQ=32) tCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTg > 1:14266072/1‑101 (MQ=32) cATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTgag > 1:8943802/1‑101 (MQ=32) cTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGGGTCGTATTCAACGTGAGAAg > 1:1181975/1‑101 (MQ=17) tGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgt > 1:8300713/1‑101 (MQ=32) tGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgt > 1:11570208/1‑101 (MQ=32) gagtagcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTgcgagacg < 1:9297522/97‑5 (MQ=2) | GACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTG > NC_007779/3460368‑3460546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |