| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,460,471 | A→G | 5.5% | V89V (GTT→GTC) | tufB ← | protein chain elongation factor EF‑Tu |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,460,471 | 0 | A→G | 5.5% | 17.3 ‑0.7 ‑0.1 | 163 | V89V (GTT→GTC) | tufB | protein chain elongation factor EF‑Tu |
| Reads supporting (aligned to +/- strand): new base (3/6): ref base (74/80): total (77/86) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.02e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.93e-01 | ||||||||||
Only 100 of 172 total aligned reads displayed.
CCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTG > NC_007779/3460371‑3460546 | ccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTa < 1:400270/101‑1 (MQ=32)ccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTa < 1:11091314/101‑1 (MQ=33)ccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTa > 1:8691370/1‑101 (MQ=32) cagcagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTaa > 1:857762/1‑101 (MQ=32) agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCCCCGGTGATCATGTTTTTAACATa > 1:8911029/1‑101 (MQ=17) agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATa > 1:6945642/1‑101 (MQ=32) agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATa > 1:12032080/1‑101 (MQ=32) ggATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAg < 1:12706079/101‑1 (MQ=33) gATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGt > 1:4938408/1‑101 (MQ=32) gATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGt < 1:270685/101‑1 (MQ=33) gATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGt > 1:1515418/1‑101 (MQ=32) acgtgCTCACGGGTCTGCGGCATCGGACCGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTc < 1:6163981/99‑1 (MQ=2) aTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTc < 1:13158181/101‑1 (MQ=32) aTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTc < 1:11813648/101‑1 (MQ=32) aTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTc < 1:9888633/101‑1 (MQ=33) gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCgg > 1:2988765/1‑101 (MQ=32) gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCgg < 1:8802477/101‑1 (MQ=33) gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCgg > 1:2546752/1‑101 (MQ=32) tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc < 1:10357599/101‑1 (MQ=33) tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc < 1:959405/101‑1 (MQ=33) tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc > 1:13185107/1‑101 (MQ=32) tgCTCACGAGTCTGCGGCATCGGGCCGTCAGGCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc > 1:4440856/1‑101 (MQ=17) gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg < 1:4631685/101‑1 (MQ=33) gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg > 1:9648231/1‑101 (MQ=32) gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg < 1:10378175/101‑1 (MQ=33) gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg < 1:13855447/101‑1 (MQ=32) gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg < 1:7250441/101‑1 (MQ=32) cTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGt > 1:11424336/1‑101 (MQ=32) tCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTg < 1:11698374/101‑1 (MQ=33) aCGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGcc > 1:5525466/1‑101 (MQ=32) cGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGccc > 1:6324205/1‑101 (MQ=32) cGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGccc < 1:1154406/101‑1 (MQ=33) gAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTNAANANAGTCGGCGTGcccc > 1:6096026/1‑101 (MQ=17) aGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg < 1:9956199/101‑1 (MQ=32) aGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg < 1:4584020/101‑1 (MQ=33) aGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg < 1:2669324/101‑1 (MQ=33) aGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg > 1:10997662/1‑101 (MQ=32) gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg > 1:7240208/1‑101 (MQ=32) gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg < 1:4538689/101‑1 (MQ=32) gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg < 1:7417908/101‑1 (MQ=32) tGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCa < 1:12575028/101‑1 (MQ=32) gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAg < 1:5607472/101‑1 (MQ=32) gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAg < 1:9264531/101‑1 (MQ=32) gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAg < 1:8093933/101‑1 (MQ=32) gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAg < 1:10614829/101‑1 (MQ=32) cGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGt > 1:2099465/1‑101 (MQ=32) ggCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTc > 1:14066220/1‑101 (MQ=32) gCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCt > 1:11973234/1‑101 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc > 1:5116460/1‑101 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc > 1:10044827/1‑101 (MQ=32) gggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtg > 1:3866483/1‑101 (MQ=32) ggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtgt < 1:9676453/101‑1 (MQ=32) gaccGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACgtga < 1:183384/99‑2 (MQ=2) ccGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGc < 1:3651332/101‑1 (MQ=32) ccGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGc < 1:8498401/101‑1 (MQ=32) gTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGC‑GTCGACGTGAGCGt < 1:1930463/101‑1 (MQ=2) gTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCTTGTTTTTACCATCGTCGGCGTGCCCCGG‑GCGGTCTACGTGTGCGt < 1:5669031/101‑1 (MQ=11) gTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGt > 1:2871056/1‑101 (MQ=33) cAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAg < 1:6421575/101‑1 (MQ=32) cAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAg > 1:520318/1‑101 (MQ=33) gTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTg > 1:10356912/1‑101 (MQ=33) tCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGa > 1:653985/1‑101 (MQ=33) cGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGAc < 1:12279814/101‑1 (MQ=32) gcagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACg > 1:4779545/1‑101 (MQ=33) cagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACgg < 1:5178784/101‑1 (MQ=32) cagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACgg < 1:3667268/101‑1 (MQ=32) cagcaACTACCAGGATCGCGCCGCCCATCTGAGCAGCCCCGGGGATCATGTTTTTAACATAGCCGGCGTGCCCCGG‑GCAGTCTACGGGGGCgaggggccgg > 1:2987271/1‑92 (MQ=11) aCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCgg < 1:10298508/101‑1 (MQ=32) tACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCgggg > 1:1879708/1‑101 (MQ=32) aCCAGGCTCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GGAGTCTACGTGTGCGTAGTGACGGGTCGGGgt < 1:14186154/101‑1 (MQ=12) aCCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCggggg > 1:2460752/1‑100 (MQ=18) aCCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgt > 1:6016463/1‑101 (MQ=33) ggATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCg < 1:6741723/101‑1 (MQ=32) ggATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCg < 1:4435006/101‑1 (MQ=32) ggATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCg < 1:5792675/101‑1 (MQ=32) gATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGt > 1:2340024/1‑101 (MQ=33) aTCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTa < 1:7726161/101‑1 (MQ=32) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt > 1:5286958/1‑101 (MQ=33) cgcgCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAtt > 1:8858557/1‑101 (MQ=33) gcgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTc > 1:10914329/1‑101 (MQ=33) gcgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTc < 1:13403190/101‑1 (MQ=32) cgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCa < 1:8158571/101‑1 (MQ=32) gcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaa > 1:3248275/1‑101 (MQ=32) gcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaa < 1:6633066/101‑1 (MQ=32) gcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaa > 1:6851182/1‑101 (MQ=32) ccGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAAc > 1:12512848/1‑101 (MQ=32) ccGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAAc > 1:939454/1‑101 (MQ=2) cGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACg < 1:5751023/101‑1 (MQ=32) cGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACg < 1:6194000/101‑1 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt < 1:6706818/101‑1 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt < 1:9048585/101‑1 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt > 1:12308883/1‑101 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGACGGGGTGTCGTATTCAACGt > 1:12970518/1‑101 (MQ=17) tCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTg < 1:11956927/101‑1 (MQ=32) tCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTg > 1:14266072/1‑101 (MQ=32) tCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTg < 1:8275194/101‑1 (MQ=32) cATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTgag < 1:3280507/101‑1 (MQ=32) aTCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTgaga < 1:12934129/101‑1 (MQ=32) tGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgt > 1:11570208/1‑101 (MQ=32) gagtagcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTgcgagacg < 1:9297522/97‑5 (MQ=2) | CCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTG > NC_007779/3460371‑3460546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |