| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,682,637 | A→G | 8.4% | C189C (TGT→TGC) | ilvD ← | dihydroxyacid dehydratase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,682,637 | 0 | A→G | 8.4% | 47.2 0.0 ‑0.2 | 248 | C189C (TGT→TGC) | ilvD | dihydroxyacid dehydratase |
| Reads supporting (aligned to +/- strand): new base (10/11): ref base (104/122): total (115/133) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.26e-01 | ||||||||||
Only 100 of 261 total aligned reads displayed.
CCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGG > NC_007779/3682537‑3682737 | agcagcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGaca > 1:4022045/1‑101 (MQ=255) agcagcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGaca > 1:5363915/1‑101 (MQ=255) cgtagaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcg > 1:1656334/11‑101 (MQ=255) cgtagaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcg < 1:3110716/91‑1 (MQ=255) cagcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACAcg > 1:3841660/1‑101 (MQ=255) cagcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACAcg < 1:7707246/101‑1 (MQ=255) gcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACAcgcg < 1:11146714/101‑1 (MQ=255) agaaccattGCCCGGCAGGGACAGGCCGAGGTCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcgccg < 1:14073450/94‑3 (MQ=255) gaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGa < 1:13287552/95‑1 (MQ=255) aGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGaa > 1:6031515/1‑101 (MQ=255) aGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGaa > 1:4061083/1‑101 (MQ=255) gCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAAc < 1:10985506/101‑1 (MQ=255) accattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGagc > 1:6912849/5‑99 (MQ=255) ccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATCCCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCg < 1:2767852/98‑1 (MQ=255) ccGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACg > 1:13006454/1‑101 (MQ=255) cattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCgc > 1:10595585/3‑100 (MQ=255) cGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGt > 1:13830081/1‑101 (MQ=255) gTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGtt > 1:11540706/1‑101 (MQ=255) attGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCgct > 1:1543050/2‑99 (MQ=255) tGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCa > 1:9023935/1‑101 (MQ=255) gCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCaa > 1:13565194/1‑101 (MQ=255) cccGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTcgat < 1:5749885/101‑4 (MQ=255) ccGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAAcc > 1:10098326/1‑101 (MQ=255) ccGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGCTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAAcc > 1:7379164/1‑101 (MQ=255) cGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCt > 1:11071864/1‑101 (MQ=255) ggCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTg < 1:2005003/101‑1 (MQ=255) ggCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTg > 1:6480363/1‑101 (MQ=255) ggCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTg > 1:6233080/1‑101 (MQ=255) cTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGAt < 1:13341538/101‑1 (MQ=255) cTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGAt < 1:9098499/101‑1 (MQ=255) tGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATc < 1:7161789/101‑1 (MQ=255) tGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATc > 1:3715571/1‑101 (MQ=255) tGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATc > 1:1966711/1‑101 (MQ=255) tGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATc < 1:1686859/101‑1 (MQ=255) gCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCg > 1:3393608/1‑101 (MQ=255) cGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGc > 1:10253343/1‑101 (MQ=255) gACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGct > 1:13477777/1‑101 (MQ=255) gACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGct > 1:11383925/1‑101 (MQ=255) gACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGct > 1:68192/1‑101 (MQ=255) cAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctct < 1:8918936/101‑1 (MQ=255) aGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTg < 1:12073191/101‑1 (MQ=255) gCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTggg > 1:8574487/1‑101 (MQ=255) cccAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGa > 1:3053272/1‑101 (MQ=255) ccAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAg > 1:10416207/1‑101 (MQ=255) cAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGt > 1:13458542/1‑101 (MQ=255) aGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTc > 1:2132932/1‑101 (MQ=255) gcgcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCa > 1:2583288/1‑101 (MQ=255) cgcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAg < 1:3542037/101‑1 (MQ=255) cgcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAg > 1:2893450/1‑101 (MQ=255) gcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGa < 1:6842837/101‑1 (MQ=255) cTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGAt < 1:6177075/101‑1 (MQ=255) ttCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATa > 1:8364685/1‑101 (MQ=255) ggTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACtt < 1:4356822/101‑1 (MQ=255) ggTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACtt < 1:7516354/101‑1 (MQ=255) gTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACttt > 1:13685988/1‑101 (MQ=255) tCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTc > 1:5066934/1‑101 (MQ=255) tCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTc < 1:5477944/101‑1 (MQ=255) cAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCg > 1:11325573/1‑101 (MQ=255) gCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGt > 1:7804019/1‑101 (MQ=255) cAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTc > 1:2477560/1‑101 (MQ=255) aGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCt < 1:10786875/101‑1 (MQ=255) gTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTg < 1:8799703/101‑1 (MQ=255) ttCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgc > 1:12910386/1‑101 (MQ=255) ttCATTGAATTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgc < 1:4722083/101‑1 (MQ=255) tCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgcg > 1:7971730/1‑101 (MQ=255) cATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgcgc < 1:1886068/101‑1 (MQ=255) aTTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGcc > 1:4546428/1‑101 (MQ=255) tGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCt < 1:9611871/101‑1 (MQ=255) tGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCt < 1:3572939/101‑1 (MQ=255) aGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatca > 1:4908826/1‑101 (MQ=255) tAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCa > 1:10477211/1‑101 (MQ=255) aaaCATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCAt > 1:5118989/1‑101 (MQ=255) aaCATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATc < 1:4802946/101‑1 (MQ=255) aTCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAAc > 1:12611565/1‑101 (MQ=255) tCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAAcc < 1:5894008/101‑1 (MQ=255) cccGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCa < 1:9399577/101‑1 (MQ=255) ccGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAg < 1:11975344/101‑1 (MQ=255) ggAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGAt < 1:9579513/101‑1 (MQ=255) ggAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGAt > 1:11183039/1‑101 (MQ=255) gAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATc < 1:5275882/101‑1 (MQ=255) gAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATc < 1:12996784/101‑1 (MQ=255) cAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAg > 1:2367224/1‑101 (MQ=255) cAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAg < 1:242406/101‑1 (MQ=255) aGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGc > 1:4460339/1‑101 (MQ=255) gAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCtt < 1:10953883/101‑1 (MQ=255) gAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCtt < 1:10001087/101‑1 (MQ=255) aaaCCGCGGGTGGGACACGCGGAATTTTCAACCTGATCGCTGTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCtt < 1:8191423/100‑1 (MQ=255) cGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTtgatg > 1:7479293/1‑101 (MQ=255) cGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTtgatg < 1:1707087/101‑1 (MQ=255) gCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTtgatga > 1:6376496/1‑101 (MQ=255) cAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTgatgat < 1:2061718/101‑1 (MQ=255) cAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTgatgat < 1:1569979/101‑1 (MQ=255) cAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTgatgat < 1:12529425/101‑1 (MQ=255) cAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTgatgat > 1:11479807/1‑101 (MQ=255) cAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTgatgat < 1:9768535/101‑1 (MQ=255) ggTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatct < 1:6140271/101‑1 (MQ=255) gTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatctg < 1:1229714/101‑1 (MQ=255) tCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatctga < 1:11320317/101‑1 (MQ=255) cGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatctgat < 1:12443699/101‑1 (MQ=255) ggACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatctgatc < 1:12861394/101‑1 (MQ=255) | CCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGG > NC_007779/3682537‑3682737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |