Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,717,825 G→A 4.5% A334A (GCG→GCA)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,717,8250G→A 4.5% 19.6 0.0 ‑0.0244A334A (GCG→GCA) atpAF1 sector of membrane‑bound ATP synthase subunit alpha
Reads supporting (aligned to +/- strand):  new base (6/5):  ref base (124/109):  total (130/114)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.96e-01

Only 100 of 258 total aligned reads displayed.

CTGCACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGG  >  NC_007779/3717725‑3717925
                                                                                                    |                                                                                                    
ctgcACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCg                                                                                                      <  1:12617100/101‑1 (MQ=255)
   cACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGt                                                                                                   <  1:3662053/101‑1 (MQ=255)
    aCGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTg                                                                                                  >  1:640315/1‑101 (MQ=255)
     cGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGa                                                                                                 >  1:1558164/1‑101 (MQ=255)
       tgtTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACg                                                                                               <  1:8950539/101‑1 (MQ=255)
            aCGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCt                                                                                          <  1:7633122/101‑1 (MQ=255)
            aCGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCt                                                                                          >  1:1516854/1‑101 (MQ=255)
             cGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTg                                                                                         <  1:8987091/101‑1 (MQ=255)
              gCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGc                                                                                        >  1:12962137/1‑101 (MQ=255)
              gCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGc                                                                                        >  1:4908471/1‑101 (MQ=255)
               ccGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcg                                                                                       <  1:2000799/101‑1 (MQ=255)
                cGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgt                                                                                      >  1:7792083/1‑101 (MQ=255)
                cGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgt                                                                                      >  1:13407223/1‑101 (MQ=255)
                 gAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgtt                                                                                     >  1:1269200/1‑101 (MQ=255)
                  aaTACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttc                                                                                    >  1:10367021/1‑101 (MQ=255)
                  aaTACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttc                                                                                    <  1:4783886/101‑1 (MQ=255)
                    tACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttcgt                                                                                  >  1:11358673/1‑101 (MQ=255)
                     aCGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttcgtt                                                                                 <  1:926647/101‑1 (MQ=255)
                     aCGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttcgtt                                                                                 <  1:4591253/101‑1 (MQ=255)
                      cGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCgttcgttc                                                                                >  1:5363583/1‑101 (MQ=255)
                       gTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTcc                                                                               <  1:13140902/101‑1 (MQ=255)
                       gTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTcc                                                                               <  1:13437677/101‑1 (MQ=255)
                       gTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTcc                                                                               <  1:7392672/101‑1 (MQ=255)
                        ttGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCg                                                                              <  1:1397340/101‑1 (MQ=255)
                          gAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGAc                                                                            <  1:7857233/101‑1 (MQ=255)
                             gCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCaa                                                                         >  1:11523511/1‑101 (MQ=255)
                             gCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCaa                                                                         <  1:3306614/101‑1 (MQ=255)
                                     cAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAtct                                                                 >  1:10138070/1‑101 (MQ=255)
                                      aaaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAtctc                                                                >  1:173820/1‑101 (MQ=255)
                                      aaaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAtctc                                                                <  1:5005431/101‑1 (MQ=255)
                                      aaaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAtctc                                                                <  1:8201508/101‑1 (MQ=255)
                                       aaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTcc                                                               >  1:7754743/1‑101 (MQ=255)
                                       aaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTcc                                                               >  1:10496375/1‑101 (MQ=255)
                                        aGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCa                                                              >  1:563269/1‑101 (MQ=255)
                                        aGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCa                                                              >  1:11223119/1‑101 (MQ=255)
                                            gaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTAc                                                          >  1:2452135/1‑101 (MQ=255)
                                              agtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCg                                                        >  1:3285945/1‑101 (MQ=255)
                                              agtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCg                                                        <  1:6712797/101‑1 (MQ=255)
                                                tgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGAt                                                      <  1:1646431/101‑1 (MQ=255)
                                                tgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGAt                                                      <  1:2074413/101‑1 (MQ=255)
                                                 gaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATg                                                     <  1:7556541/101‑1 (MQ=255)
                                                    aGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTc                                                  >  1:4712812/1‑101 (MQ=255)
                                                    aGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTc                                                  <  1:2971756/101‑1 (MQ=255)
                                                     gggAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCa                                                 <  1:11001953/101‑1 (MQ=255)
                                                     gggAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCa                                                 <  1:8250209/101‑1 (MQ=255)
                                                     gggAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCa                                                 <  1:9483756/101‑1 (MQ=255)
                                                        aaaaCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGAt                                              >  1:11606350/1‑101 (MQ=255)
                                                          aaCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCt                                            >  1:3710034/1‑101 (MQ=255)
                                                           aCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCtt                                           >  1:715084/1‑101 (MQ=255)
                                                            ccGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTc                                          >  1:9803000/1‑101 (MQ=255)
                                                              ggctcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCt                                        <  1:5561347/95‑1 (MQ=255)
                                                               gTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTg                                       >  1:13873473/1‑101 (MQ=255)
                                                                ttCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTgg                                      <  1:8321345/101‑1 (MQ=255)
                                                                ttCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTgg                                      <  1:5137875/101‑1 (MQ=255)
                                                                 tctcTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGa                                     >  1:12844805/1‑101 (MQ=255)
                                                                 tcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGa                                     >  1:6935664/4‑101 (MQ=255)
                                                                 tcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGa                                     <  1:1057631/98‑1 (MQ=255)
                                                                  ctctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaa                                    >  1:11771619/1‑101 (MQ=255)
                                                                  ctctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaa                                    >  1:2675365/1‑101 (MQ=255)
                                                                  ctctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaa                                    <  1:2483689/101‑1 (MQ=255)
                                                                  ctctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGGCAGACCTTCCTGGaa                                    >  1:1073905/1‑101 (MQ=255)
                                                                  cgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGGCCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGag                                    <  1:6142809/99‑2 (MQ=255)
                                                                  cgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGag                                    >  1:6294615/3‑100 (MQ=255)
                                                                   tctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGGTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaaa                                   >  1:8912926/1‑101 (MQ=255)
                                                                    ctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaac                                  >  1:7588318/1‑101 (MQ=255)
                                                                     tGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaacc                                 >  1:6628506/1‑101 (MQ=255)
                                                                        ccGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaac                              >  1:960394/1‑101 (MQ=255)
                                                                        ccGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaac                              <  1:205226/101‑1 (MQ=255)
                                                                           cACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGCTGGTCAGATCTTCCTGGAAACCAACCTg                           >  1:13084577/1‑101 (MQ=255)
                                                                           cACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTg                           >  1:1025855/1‑101 (MQ=255)
                                                                           cACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTg                           >  1:12468161/1‑101 (MQ=255)
                                                                            aCTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGt                          >  1:12870942/1‑101 (MQ=255)
                                                                             cTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGtt                         >  1:5302721/1‑101 (MQ=255)
                                                                             cTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGtt                         >  1:2605046/1‑101 (MQ=255)
                                                                             cTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGtt                         <  1:4149305/101‑1 (MQ=255)
                                                                                ccGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCaa                      <  1:7273259/101‑1 (MQ=255)
                                                                                  gATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCTTGGAAACCAACCTGTTCAACg                    <  1:11917555/101‑1 (MQ=255)
                                                                                  gATTATCGAAACTCAGGCGGGCGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACg                    >  1:8755953/1‑101 (MQ=255)
                                                                                     tATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCg                 <  1:3557507/101‑1 (MQ=255)
                                                                                     tATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCg                 <  1:5204610/101‑1 (MQ=255)
                                                                                      aTCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCgg                >  1:3847541/1‑101 (MQ=255)
                                                                                      aTCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCgg                <  1:1663350/101‑1 (MQ=255)
                                                                                       tCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGt               >  1:9222320/1‑101 (MQ=255)
                                                                                        cGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTa              <  1:8047966/101‑1 (MQ=255)
                                                                                         gAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGGAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAt             >  1:3115905/1‑101 (MQ=255)
                                                                                          aaaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAtt            >  1:12165651/1‑101 (MQ=255)
                                                                                          aaaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAtt            <  1:14192799/101‑1 (MQ=255)
                                                                                           aaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTc           <  1:12445707/101‑1 (MQ=255)
                                                                                           aaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTc           >  1:6055026/1‑101 (MQ=255)
                                                                                           aaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTc           <  1:10631572/101‑1 (MQ=255)
                                                                                             cTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGt         <  1:7228397/101‑1 (MQ=255)
                                                                                             cTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGt         <  1:2272719/101‑1 (MQ=255)
                                                                                              tCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTc        <  1:8616765/101‑1 (MQ=255)
                                                                                              tCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTc        >  1:3003004/1‑101 (MQ=255)
                                                                                               cAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTcc       >  1:10056681/1‑101 (MQ=255)
                                                                                                aGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCt      <  1:2765789/101‑1 (MQ=255)
                                                                                                  gCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGc    >  1:1080318/1‑101 (MQ=255)
                                                                                                  gCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGc    <  1:4517320/101‑1 (MQ=255)
                                                                                                  gCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGc    <  1:10441120/101‑1 (MQ=255)
                                                                                                    gggTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCgg  <  1:11230851/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CTGCACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGG  >  NC_007779/3717725‑3717925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.