| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,168,124 | G→C | 3.4% | R408P (CGT→CCT) | fusA → | protein chain elongation factor EF‑G |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,168,124 | 0 | G→C | 3.4% | 16.5 ‑2.3 ‑0.0 | 262 | R408P (CGT→CCT) | fusA | protein chain elongation factor EF‑G |
| Reads supporting (aligned to +/- strand): new base (7/2): ref base (122/131): total (129/133) | ||||||||||
| Fisher's exact test strand distribution p-value = 9.90e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.70e-01 | ||||||||||
Only 100 of 279 total aligned reads displayed.
AAAGAAGTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAA > NC_007779/4168024‑4168224 | aaaGAAGTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACg > 1:265219/1‑101 (MQ=255)aaaGAAGTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACg > 1:7997500/1‑101 (MQ=255) aagaagTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGt > 1:6163708/1‑101 (MQ=255) aagaagTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGt > 1:10342416/1‑101 (MQ=255) agaagTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTa > 1:5963062/1‑101 (MQ=255) agaagTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTa < 1:180961/101‑1 (MQ=255) gaagTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTAt < 1:11976029/101‑1 (MQ=255) aagTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATg > 1:10887088/1‑101 (MQ=255) aagTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATg > 1:10124434/1‑101 (MQ=255) atttCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATgg < 1:11869243/99‑1 (MQ=255) agTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATgg > 1:1378234/1‑101 (MQ=255) agTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATgg > 1:4856052/1‑101 (MQ=255) tCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAAt < 1:315565/101‑1 (MQ=255) cgcgcgGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAAtt > 1:4142772/1‑101 (MQ=255) cgcgcgGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAAtt > 1:12260699/1‑101 (MQ=255) gcgcgGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTc > 1:1395496/1‑101 (MQ=255) gcgcgGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTc > 1:11637542/1‑101 (MQ=255) gcgGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTccc < 1:540793/101‑1 (MQ=255) gggCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTg < 1:8253002/101‑1 (MQ=255) gggCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTg < 1:2736548/101‑1 (MQ=255) cGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGc > 1:2379204/1‑101 (MQ=255) gACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGcc > 1:2242229/1‑101 (MQ=255) aCATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCg < 1:4745496/101‑1 (MQ=255) cATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGAGCCGATCATTCTGGAACGTATGGAATTCCCTTAGCCgg > 1:3419403/1‑101 (MQ=255) tCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTa < 1:10950755/101‑1 (MQ=255) cGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTaa < 1:10922772/101‑1 (MQ=255) cGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTaa > 1:6425367/1‑101 (MQ=255) gctgctgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAAt < 1:3990501/101‑1 (MQ=255) gctgctgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAAt > 1:8914090/1‑101 (MQ=255) ctgctgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAAtc < 1:12694486/101‑1 (MQ=255) tgctgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAAtct > 1:5121483/1‑101 (MQ=255) gctgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGAACATTCTGGAACGTATGGAATTCCCTGAGCCGGTAAtctc > 1:12114024/1‑101 (MQ=255) gccttcattggTCTGAAGGACACCACCACTGGTGACACCCTGCGTGCACAGGATGCTCCAATCGTTCTGGAGTCCATGTCCTTCCCGGATCCGGTTAtctc > 1:3854205/10‑101 (MQ=255) tgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCa > 1:2688442/1‑101 (MQ=255) tgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCa < 1:10562973/101‑1 (MQ=255) gctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCAt > 1:175201/1‑101 (MQ=255) ctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATc < 1:9372392/101‑1 (MQ=255) ctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATc < 1:5720033/101‑1 (MQ=255) ctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATc < 1:10158282/101‑1 (MQ=255) ctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATc < 1:8578099/101‑1 (MQ=255) ctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATc < 1:4478988/101‑1 (MQ=255) tATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCg < 1:8082870/101‑1 (MQ=255) tCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCa > 1:10804479/1‑101 (MQ=255) cGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAg > 1:7330715/1‑101 (MQ=255) ggTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGt > 1:13005691/1‑101 (MQ=255) tGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGaa > 1:4637560/1‑101 (MQ=255) tGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGaa > 1:12460336/1‑101 (MQ=255) tGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGaa < 1:3944394/101‑1 (MQ=255) aaaGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAAcc > 1:1525035/1‑101 (MQ=255) aggacaccaCCACTGGTGACACCCTGTGTGCACAGGATGCTCCAATCGCTCTGGAGTCCATGTCCTTCCCGGATCCGGTCATCTCCGTTGCTATTGAGCCg > 1:2964803/9‑101 (MQ=255) aaGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCg < 1:9553210/101‑1 (MQ=255) aaGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCg < 1:7194256/101‑1 (MQ=255) aCGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGaaa < 1:1368196/101‑1 (MQ=255) aCGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGaaa < 1:11739581/101‑1 (MQ=255) caccaCCACTGGTGACACCCTGTGTGCACAGGATGCTCCAATCGTTCTGGAGTCCATGTCCTTCCCGGATCCGGTTATCTCCGTTGCTATTGAGCCGaagt > 1:6266274/5‑99 (MQ=255) cGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGaaaa < 1:2748379/101‑1 (MQ=255) aCCACTGGTGACACCCTGTGTGCACAGGATGCTCCAATCGTTCTGGAGTCCATGTCCTTCCCGGATCCGGTTATCTCCGTTGCTATTGAGCCGAAGTCCaa > 1:7151235/1‑101 (MQ=255) aCCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCaa > 1:6734743/1‑101 (MQ=255) aCCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCaa > 1:12730481/1‑101 (MQ=255) cACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAg > 1:5195589/1‑101 (MQ=255) cACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAg > 1:2026631/1‑101 (MQ=255) cTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCt < 1:13454535/101‑1 (MQ=255) tGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCta > 1:4077001/1‑100 (MQ=255) tGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTg < 1:6620392/101‑1 (MQ=255) tGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTg < 1:1412839/101‑1 (MQ=255) gTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGAc > 1:12209088/1‑101 (MQ=255) cccTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaa > 1:3723224/1‑101 (MQ=255) ccTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaaa < 1:8536917/101‑1 (MQ=255) cTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaaaa < 1:13253233/101‑1 (MQ=255) cTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaaaa < 1:5821964/101‑1 (MQ=255) tgtgtgACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaaaaa < 1:5613231/101‑1 (MQ=255) tgtgACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAAt < 1:3076396/101‑1 (MQ=255) aCCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGt < 1:10001384/101‑1 (MQ=255) aCCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGt < 1:1141495/101‑1 (MQ=255) ggATGCGCCGATCATTCTGGATCGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCAAAAACCAAAGCTGACCAGGAAAAAATGGGTCTgg < 1:9293739/101‑1 (MQ=255) ggATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTgg > 1:10205375/1‑101 (MQ=255) ggATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTgg > 1:3247117/1‑101 (MQ=255) gATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGc > 1:4531864/1‑101 (MQ=255) aTGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGct > 1:8420070/1‑101 (MQ=255) tGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGctc < 1:7668618/101‑1 (MQ=255) gcgcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGctct < 1:6849205/101‑1 (MQ=255) gcgcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGctct < 1:12346451/101‑1 (MQ=255) cgcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTg < 1:9768785/101‑1 (MQ=255) cgcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTg > 1:157727/1‑101 (MQ=255) gcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTgg > 1:13111481/1‑101 (MQ=255) gcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTgg > 1:4223745/1‑101 (MQ=255) gcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTgg > 1:8484617/1‑101 (MQ=255) gATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGcc > 1:4614173/1‑101 (MQ=255) gATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGcc < 1:8320319/101‑1 (MQ=255) cATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTc > 1:3540296/1‑101 (MQ=255) aTTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCt < 1:4936929/101‑1 (MQ=255) aTTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCt < 1:1127462/101‑1 (MQ=255) tCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTgg < 1:9164376/101‑1 (MQ=255) tCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTgg < 1:7004547/101‑1 (MQ=255) tCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTgg < 1:7819975/101‑1 (MQ=255) ggAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTa < 1:6129081/101‑1 (MQ=255) gAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTaa > 1:4412670/1‑101 (MQ=255) aCGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGCCTGGCTCTGGGCCGTCTGCCTAaag > 1:10377052/1‑101 (MQ=255) cGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAaaga < 1:11149942/101‑1 (MQ=255) gTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAaagaa > 1:8816614/1‑101 (MQ=255) | AAAGAAGTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAA > NC_007779/4168024‑4168224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |