New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 2322124NA (NA)226 (1.060) 130/180 NT 100% intergenic (‑91/‑2589) insC/atoS IS2 element protein/sensory histidine kinase in two‑component regulatory system with AtoC
?NC_007779 2589830 = 0 (0.000)intergenic (+466/‑73) acrD/yffB aminoglycoside/multidrug efflux system/hypothetical protein

Only 100 of 271 total aligned reads displayed.

CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/2322027‑2322124
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGGTATCAAAAAT  >  NC_007779/2589830‑2589929
                                                                                                                                                                                                      
CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATA                                                                                                   <  1:14915257/101‑1
CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATA                                                                                                   >  1:11008268/1‑101
CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATA                                                                                                   >  1:4103529/1‑101
 AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAA                                                                                                  <  1:2680432/101‑1
 AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAA                                                                                                  <  1:6921111/101‑1
 AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAA                                                                                                  <  1:1157429/101‑1
 AATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAA                                                                                                  <  1:4020208/101‑1
   TCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATC                                                                                                <  1:12586923/101‑1
    CATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCA                                                                                               <  1:4332753/101‑1
     ATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATtta                                                                                              >  1:11165449/1‑98
     ATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATtta                                                                                              >  1:12517674/1‑98
      TCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATT                                                                                             <  1:13425689/101‑1
       CTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTT                                                                                            >  1:15180654/1‑101
         GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATttactgc                                                                                          >  1:12918664/1‑94
         GTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATttactgc                                                                                          >  1:11772321/1‑94
            CTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATttactgcatc                                                                                       >  1:7092683/1‑91
            CTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGG                                                                                       <  1:14397522/101‑1
            CTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGG                                                                                       >  1:5858983/1‑101
              CCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCA                                                                                     >  1:9332140/1‑101
              CCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCA                                                                                     <  1:8006501/101‑1
              CCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCA                                                                                     <  1:1662619/101‑1
               CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAA                                                                                    <  1:11887838/101‑1
                 ATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAA                                                                                  >  1:5935529/1‑101
                 ATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAA                                                                                  >  1:2290351/1‑101
                  TGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAAT                                                                                 <  1:12217239/101‑1
                     CTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTT                                                                              <  1:4507799/101‑1
                     CTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTT                                                                              >  1:1496875/1‑101
                      TAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTT                                                                             <  1:356671/101‑1
                      TAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTT                                                                             >  1:8775784/1‑101
                       AGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTT                                                                            <  1:10165302/101‑1
                        GTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTC                                                                           <  1:4873710/101‑1
                         TCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCA                                                                          <  1:11407816/101‑1
                         TCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCA                                                                          <  1:5296221/101‑1
                            AAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCC                                                                       <  1:10796496/101‑1
                            AAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCC                                                                       >  1:14774091/1‑101
                             AAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCT                                                                      <  1:1772376/101‑1
                             AAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCT                                                                      <  1:2677070/101‑1
                               AACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTA                                                                    >  1:7625073/1‑101
                               AACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTA                                                                    >  1:5079300/1‑101
                               AACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTA                                                                    <  1:6586742/101‑1
                                ACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAA                                                                   <  1:5524873/101‑1
                                  TAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAAT                                                                 >  1:13850205/1‑101
                                   AGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATG                                                                >  1:8841524/1‑101
                                   AGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATG                                                                >  1:13073703/1‑101
                                   AGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATG                                                                <  1:13518216/101‑1
                                     TATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAG                                                              >  1:7205877/1‑101
                                      ATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGT                                                             <  1:6789916/101‑1
                                      ATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGT                                                             >  1:15176433/1‑101
                                       TTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTA                                                            >  1:5357017/1‑101
                                        TAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTAT                                                           >  1:7002061/1‑101
                                         AAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCCAAATGTTTTCACCCTTAAATGAGTATT                                                          <  1:12057626/101‑1
                                         AAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATT                                                          <  1:14591005/101‑1
                                         AAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATT                                                          <  1:13193539/101‑1
                                          AGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTT                                                         <  1:10783684/101‑1
                                          AGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTT                                                         >  1:6482325/1‑101
                                           GACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTA                                                        <  1:14318481/101‑1
                                           GACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTA                                                        >  1:3806941/1‑101
                                            ACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTAT                                                       >  1:4584275/1‑101
                                             CTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATT                                                      <  1:13366258/101‑1
                                             CTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATT                                                      <  1:3285183/101‑1
                                             CTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATT                                                      <  1:11943140/101‑1
                                                TCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTC                                                   <  1:6282670/101‑1
                                                  ACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCAT                                                 >  1:475124/1‑101
                                                   CTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATA                                                <  1:282207/101‑1
                                                   CTTATTTAAGTGATATAGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATA                                                <  1:10089207/101‑1
                                                    TTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAA                                               <  1:12410718/101‑1
                                                    TTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAA                                               >  1:13781934/1‑101
                                                      ATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAAT                                             >  1:10041282/1‑101
                                                      ATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAAT                                             >  1:6406989/1‑101
                                                      ATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAAT                                             >  1:13630559/1‑101
                                                       TTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATC                                            <  1:828889/101‑1
                                                        TTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCG                                           <  1:12531768/101‑1
                                                        TTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCG                                           <  1:1872770/101‑1
                                                         TAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGA                                          <  1:4815223/101‑1
                                                             TGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAA                                      <  1:9601062/101‑1
                                                             TGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAA                                      <  1:8561105/101‑1
                                                               ATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGG                                    <  1:9009278/101‑1
                                                                 ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGAT                                  >  1:9819436/1‑101
                                                                 ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGAT                                  <  1:5115605/101‑1
                                                                 ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGAT                                  <  1:14056049/101‑1
                                                                 ATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGAT                                  >  1:2430175/1‑101
                                                                    GGTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCA                               >  1:2609890/1‑101
                                                                     GTTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCAT                              >  1:4663438/1‑101
                                                                      TTGTCTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATT                             >  1:4285982/1‑101
                                                                          CTGGAGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGG                         >  1:9056922/1‑101
                                                                              AGATTCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTAC                     >  1:1999367/1‑101
                                                                                  TCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTT                 <  1:2914574/101‑1
                                                                                  TCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTT                 >  1:7779726/1‑101
                                                                                  TCAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTT                 >  1:5414773/1‑101
                                                                                   CAGGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTT                >  1:9236533/1‑101
                                                                                     GGGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTAC              <  1:8687446/101‑1
                                                                                      GGGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACG             <  1:2761586/101‑1
                                                                                       GGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGG            >  1:3209944/1‑101
                                                                                       GGGCCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGG            <  1:913270/101‑1
                                                                                          CCAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGGTAT         >  1:13663914/1‑101
                                                                                           CAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGGTATC        <  1:7266389/101‑1
                                                                                           CAGTCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGGTATC        <  1:10957501/101‑1
                                                                                              TCTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGGTATCAAA     >  1:10256036/1‑101
                                                                                               CTAATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGGTATCAAAA    >  1:3402295/1‑101
                                                                                                 AATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGGTATCAAAAAT  >  1:8198024/1‑101
                                                                                                                                                                                                      
CAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/2322027‑2322124
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCATAAATCGAAAAAGGATTCATTATGGTTACACTTTACGGTATCAAAAAT  >  NC_007779/2589830‑2589929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.