Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 224,921 A→T 36.8% noncoding (1151/1542 nt) rrsH → 16S ribosomal RNA

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_007779224,9210A→T36.8% 0.0 ‑3.2 0.0274noncoding (1151/1542 nt)rrsH16S ribosomal RNA
Reads supporting (aligned to +/- strand):  new base (67/34):  ref base (92/81):  total (159/115)
Fisher's exact test strand distribution p-value = 4.22e-02
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

Only 100 of 286 total aligned reads displayed.

CTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAG  >  NC_007779/224821‑224990
                                                                                                      |                                                                      
ctgcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCaa                                                                        >  1:9288491/1‑101 (MQ=32)
 tgcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCaaa                                                                       <  1:7052385/101‑1 (MQ=33)
  gcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAg                                                                      >  1:11007511/1‑101 (MQ=32)
    aTGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGga                                                                    <  1:10237479/101‑1 (MQ=33)
    aTGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGga                                                                    <  1:9589860/101‑1 (MQ=33)
    aTGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGga                                                                    >  1:3561224/1‑101 (MQ=32)
     tGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGgag                                                                   <  1:2782004/101‑1 (MQ=33)
     tGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCAGGGAACTCAAAGgag                                                                   <  1:9048313/101‑1 (MQ=18)
       gCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGAc                                                                 <  1:14420864/101‑1 (MQ=32)
       gCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGAc                                                                 <  1:13423386/101‑1 (MQ=33)
         tGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTg                                                               <  1:464393/101‑1 (MQ=33)
          gtcgtcAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGc                                                              >  1:11828405/1‑101 (MQ=32)
           tcgtcAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGcc                                                             >  1:8719743/1‑101 (MQ=32)
            cgtcAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCa                                                            >  1:10818994/1‑101 (MQ=32)
             gtcAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAg                                                           <  1:3737675/101‑1 (MQ=32)
                 gCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGAt                                                       >  1:4018841/1‑101 (MQ=32)
                  cTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATa                                                      <  1:11373322/101‑1 (MQ=32)
                  cTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATa                                                      <  1:3456723/101‑1 (MQ=32)
                    cGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATaaa                                                    <  1:2447245/101‑1 (MQ=32)
                    cGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATaaa                                                    <  1:3025758/101‑1 (MQ=32)
                       gttgtGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑g                                                >  1:14083849/1‑101 (MQ=32)
                          gtgAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑ggag                                             <  1:8490877/101‑1 (MQ=32)
                            gAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑ggagga                                           <  1:14807689/101‑1 (MQ=32)
                                  ttGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTgg                                     >  1:12335287/1‑101 (MQ=33)
                                   tGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTggg                                    <  1:1180983/101‑1 (MQ=32)
                                    gggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCTGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTgggg                                   >  1:4318885/1‑101 (MQ=18)
                                       ttAAGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGAt                                 <  1:4413470/101‑1 (MQ=2)
                                       ttAAGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGAt                                 >  1:9714737/1‑101 (MQ=2)
                                       ttAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATg                                >  1:9541269/1‑101 (MQ=32)
                                        tAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGa                               >  1:14919776/1‑101 (MQ=33)
                                         aaGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGa                               >  1:12506198/1‑101 (MQ=2)
                                         aaGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGa                               >  1:10342155/1‑101 (MQ=2)
                                          aGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGACACTGCCGGGGTTAACTA‑GGAGGAAGGTGGGGCTGAc                              >  1:6771193/1‑101 (MQ=2)
                                          aGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGAc                              >  1:13255388/1‑101 (MQ=2)
                                           gTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACg                             >  1:6322633/1‑101 (MQ=2)
                                           gTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACg                             >  1:1870943/1‑101 (MQ=2)
                                           gTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGt                            <  1:1692738/101‑1 (MQ=32)
                                            tCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGt                            >  1:5508128/1‑101 (MQ=2)
                                            tCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGt                            >  1:12269629/1‑101 (MQ=2)
                                            tCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCC‑GGGGTTAACTCGGAGGAAGGTGGGGATGACGt                            <  1:7124675/101‑1 (MQ=2)
                                            tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTc                           <  1:5631126/101‑1 (MQ=32)
                                            tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTc                           <  1:14156407/101‑1 (MQ=32)
                                            tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTc                           <  1:8155690/101‑1 (MQ=32)
                                             cccGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTc                           >  1:4159256/1‑101 (MQ=2)
                                             cccGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTc                           >  1:7000328/1‑101 (MQ=2)
                                             cccGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTc                           >  1:2950810/1‑101 (MQ=2)
                                             cccGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTc                           >  1:330668/1‑101 (MQ=2)
                                             cccGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTc                           >  1:3369832/1‑101 (MQ=2)
                                               cGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaa                         >  1:6115643/1‑101 (MQ=2)
                                               cGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGC‑ACGTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaa                         >  1:11689713/1‑101 (MQ=2)
                                               cGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACACAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAg                        >  1:5028699/1‑101 (MQ=18)
                                                gCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaaa                        >  1:8364812/1‑100 (MQ=2)
                                                gCAACGAGCGCAACCCTTGTCTTATGTTGCCAGC‑ACGTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaaa                        >  1:6372330/1‑100 (MQ=2)
                                                gCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGt                       >  1:7626131/1‑101 (MQ=33)
                                                 cAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaaat                       >  1:12800556/1‑99 (MQ=2)
                                                 cAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaaat                       >  1:13663158/1‑99 (MQ=2)
                                                 cAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaaat                       <  1:7527153/101‑3 (MQ=2)
                                                 cAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaaat                       >  1:2069707/1‑99 (MQ=2)
                                                 cAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGtc                      >  1:3339860/1‑101 (MQ=33)
                                                 cAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGtc                      <  1:11559466/101‑1 (MQ=32)
                                                 cAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGtc                      <  1:2140454/101‑1 (MQ=32)
                                                  aaCGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtc                      >  1:12003635/1‑101 (MQ=2)
                                                  aaCGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtc                      >  1:7722506/1‑101 (MQ=2)
                                                  aaCGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtc                      >  1:406538/1‑101 (MQ=2)
                                                  aaCGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGtca                     >  1:312224/1‑101 (MQ=33)
                                                   aCGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGG‑TTAACTCGGAGGAAGGTGGGGATGACGTCAAAtca                     <  1:5689020/101‑1 (MQ=2)
                                                   aCGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGtcat                    >  1:7896645/1‑101 (MQ=33)
                                                    cGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtcat                    >  1:13172334/1‑101 (MQ=2)
                                                    cGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACATCAAAtcat                    <  1:481506/101‑1 (MQ=255)
                                                     gAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtcatc                   >  1:11260155/1‑101 (MQ=2)
                                                     gAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtcatc                   <  1:10738911/101‑1 (MQ=2)
                                                      aGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtcatca                  >  1:8021381/1‑101 (MQ=2)
                                                      aGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCC‑GGGGTTAACTCGGAGGAAGGTGGGGATGACGTCAAAtcatca                  <  1:528770/101‑1 (MQ=2)
                                                      aGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCC‑GGGGTTAACTCGGAGGAAGGTGGGGATGACGTCAAAtcatca                  <  1:1469158/101‑1 (MQ=2)
                                                       gcgcAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATg                <  1:11187351/101‑1 (MQ=32)
                                                        cgcATCCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAATCATCATg                <  1:9091600/101‑1 (MQ=2)
                                                        cgcAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAATCATCATg                >  1:8339548/1‑101 (MQ=2)
                                                        cgcAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATgg               >  1:2682402/1‑101 (MQ=33)
                                                        cgcAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATgg               <  1:10668324/101‑1 (MQ=32)
                                                        cgcAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATgg               >  1:3269833/1‑101 (MQ=33)
                                                         gcAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAATCATCATgc               >  1:15014160/1‑100 (MQ=2)
                                                         gcAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAATCATCATgc               <  1:1741469/101‑2 (MQ=2)
                                                         gcAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGc              >  1:1612322/1‑101 (MQ=32)
                                                         gcAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGc              <  1:947642/101‑1 (MQ=32)
                                                         gcAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGc              >  1:13742166/1‑101 (MQ=32)
                                                         gcAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGc              <  1:13081684/101‑1 (MQ=32)
                                                           aaCCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAATCATCATGCcc             >  1:15155609/1‑101 (MQ=2)
                                                           aaCCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAATCATCATGCcc             <  1:5151044/101‑1 (MQ=2)
                                                           aaCCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGccc            >  1:7675972/1‑101 (MQ=32)
                                                            aCCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCt           <  1:9940085/101‑1 (MQ=32)
                                                             cccTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCtt          >  1:8794534/1‑101 (MQ=32)
                                                             cccTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCtt          <  1:138878/101‑1 (MQ=32)
                                                             cccTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCtt          >  1:3810838/1‑101 (MQ=32)
                                                             cccTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGGGGCGATGACGTCAAGTCATCATGGCCCtt          >  1:12095070/1‑101 (MQ=12)
                                                               cTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTAc        >  1:7284629/1‑101 (MQ=32)
                                                               cTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTAc        <  1:4601731/101‑1 (MQ=32)
                                                                ttATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACg       <  1:5884058/101‑1 (MQ=32)
                                                                  aTCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGAc     >  1:2299803/1‑101 (MQ=32)
                                                                    cTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGACCTTACGACCa   >  1:14465661/1‑101 (MQ=14)
                                                                     ttttGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAg  >  1:7451892/1‑101 (MQ=11)
                                                                                                      |                                                                      
CTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAG  >  NC_007779/224821‑224990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.