| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 846,369 | G→C | 7.1% | H173D (CAT→GAT) | glnQ ← | glutamine transporter subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 846,369 | 0 | G→C | 7.1% | 46.4 ‑0.2 ‑0.0 | 255 | H173D (CAT→GAT) | glnQ | glutamine transporter subunit |
| Reads supporting (aligned to +/- strand): new base (9/9): ref base (108/129): total (117/138) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.08e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.79e-01 | ||||||||||
Only 100 of 267 total aligned reads displayed.
AGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGACCA > NC_007779/846269‑846469 | aGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑Tg < 1:13609383/101‑1 (MQ=255) ccGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgc > 1:10331874/1‑101 (MQ=255) ccGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgc < 1:8621215/101‑1 (MQ=255) ccGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgc < 1:8167824/101‑1 (MQ=255) cgcgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgcg > 1:13054282/1‑101 (MQ=255) cgcgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgcg < 1:5480998/101‑1 (MQ=255) aaGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGt > 1:12413291/1‑101 (MQ=255) aGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGtt > 1:631672/1‑101 (MQ=255) gCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTc < 1:7258045/101‑1 (MQ=255) gCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTc < 1:12997557/101‑1 (MQ=255) tACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCg < 1:4852827/101‑1 (MQ=255) tttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGt > 1:8946724/1‑101 (MQ=255) tctcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCa > 1:1539895/1‑101 (MQ=255) ctcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCaa > 1:13529906/1‑101 (MQ=255) ctcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCaa < 1:4689383/101‑1 (MQ=255) ctcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCaa < 1:10017585/101‑1 (MQ=255) ctcGGCAAAACCGATTTCGTGGGCCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCTCAGTTCCGGGTCaa > 1:700087/1‑101 (MQ=255) cGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAaga > 1:4817352/1‑101 (MQ=255) ggCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAagag > 1:1516522/1‑101 (MQ=255) ggCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAagag < 1:7931450/101‑1 (MQ=255) gCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGc < 1:2816477/101‑1 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:11438297/1‑101 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:12881924/1‑101 (MQ=255) aaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGa > 1:14938342/1‑101 (MQ=255) aaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGaa < 1:2918456/101‑1 (MQ=255) aaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGaa > 1:15213468/1‑101 (MQ=255) aaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGaa > 1:9855930/1‑101 (MQ=255) ccatctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTc < 1:3805019/96‑1 (MQ=255) ccatctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTc < 1:5225768/96‑1 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc > 1:7143644/1‑101 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:6388866/101‑1 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:594240/101‑1 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCTTGCATAACCTTCAGCACTTCA‑TGACGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:6878369/1‑101 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:10514029/1‑101 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:11553549/1‑101 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:14333406/1‑101 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:13372277/1‑101 (MQ=255) atctCGTGCGTCACGACGACCATGGTCATACCCTT‑ATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCgg > 1:9097832/4‑101 (MQ=255) ttCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGtt > 1:13139349/1‑101 (MQ=255) ctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCggct < 1:7607052/100‑3 (MQ=255) tCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCtc < 1:3023212/101‑1 (MQ=255) cGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCtca < 1:9715423/101‑1 (MQ=255) cGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCtca < 1:11201939/101‑1 (MQ=255) cGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCtca < 1:7487150/101‑1 (MQ=255) cGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCtca > 1:8464191/1‑101 (MQ=255) gTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcat < 1:4496802/101‑1 (MQ=255) gTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCtcat > 1:11853063/1‑101 (MQ=255) gggTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcatca < 1:15052181/101‑1 (MQ=255) gggTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcacca < 1:14065617/101‑1 (MQ=255) ggTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCaa > 1:1237450/1‑101 (MQ=255) tCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAAc > 1:1700300/1‑101 (MQ=255) tCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAAc < 1:11013859/101‑1 (MQ=255) aCGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAg > 1:6136877/1‑101 (MQ=255) aCGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAg > 1:3143063/1‑101 (MQ=255) cGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGc < 1:9655864/101‑1 (MQ=255) gATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGca > 1:3995679/1‑101 (MQ=255) gATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGca < 1:14633937/101‑1 (MQ=255) tCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGcatc < 1:6835579/101‑1 (MQ=255) gaCCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCTCATCGAAGAGcatta < 1:4447797/100‑3 (MQ=255) tCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTc < 1:5754743/101‑1 (MQ=255) cGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCg < 1:9371015/101‑1 (MQ=255) gTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCgg > 1:6257838/1‑101 (MQ=255) gTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGCTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCgg > 1:1928335/1‑101 (MQ=255) tCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATTATTTTCGGc > 1:8609389/1‑101 (MQ=255) tCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGc < 1:5590426/101‑1 (MQ=255) tCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGc < 1:3653998/101‑1 (MQ=255) cAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCt < 1:2682432/101‑1 (MQ=255) aT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCTAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCtt > 1:10862426/1‑101 (MQ=255) aT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCtt > 1:1734747/1‑101 (MQ=255) t‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTc < 1:14857614/101‑1 (MQ=255) t‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTc < 1:3338324/101‑1 (MQ=255) cccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCa > 1:10961042/1‑101 (MQ=255) cttcttCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAcc < 1:6023042/101‑1 (MQ=255) cttcttCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAcc < 1:11303110/101‑1 (MQ=255) ttcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCg < 1:11086823/101‑1 (MQ=255) cttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGcc > 1:11616223/1‑101 (MQ=255) tcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAg < 1:9423676/101‑1 (MQ=255) tcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAg < 1:12057510/101‑1 (MQ=255) cAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgc < 1:12384288/101‑1 (MQ=255) cAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgc > 1:5288299/1‑101 (MQ=255) aGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcg < 1:249589/101‑1 (MQ=255) aGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcg < 1:10698950/101‑1 (MQ=255) gCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcgc < 1:3409799/101‑1 (MQ=255) cAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcgcgc < 1:3707468/101‑1 (MQ=255) aGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGcgcgcg > 1:8216632/1‑101 (MQ=255) tGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAAt > 1:4279339/1‑101 (MQ=255) gCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATc < 1:7548609/101‑1 (MQ=255) aTAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGc < 1:4503077/101‑1 (MQ=255) ttCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACg > 1:8258833/1‑101 (MQ=255) cAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgct < 1:4907238/101‑1 (MQ=255) aGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctg > 1:13783798/1‑101 (MQ=255) gCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgc > 1:12202984/1‑101 (MQ=255) gCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgc > 1:10047285/1‑101 (MQ=255) gCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgc < 1:407437/101‑1 (MQ=255) cACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgct < 1:10373283/101‑1 (MQ=255) aCTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGctgctg > 1:6576414/1‑101 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt > 1:7834054/1‑101 (MQ=255) cA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGa < 1:12625187/101‑1 (MQ=255) a‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGac > 1:5879515/1‑101 (MQ=255) tGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGacc > 1:9208979/1‑101 (MQ=255) | AGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGACCA > NC_007779/846269‑846469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |