| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 846,371 | C→A | 7.1% | R172L (CGC→CTC) | glnQ ← | glutamine transporter subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 846,371 | 0 | C→A | 7.1% | 36.2 ‑0.2 0.0 | 252 | R172L (CGC→CTC) | glnQ | glutamine transporter subunit |
| Reads supporting (aligned to +/- strand): new base (9/9): ref base (107/127): total (116/136) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.08e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 264 total aligned reads displayed.
CCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGACCACC > NC_007779/846271‑846471 | ccGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgc < 1:3007312/101‑1 (MQ=255)ccGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgc < 1:8621215/101‑1 (MQ=255)ccGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgc < 1:8167824/101‑1 (MQ=255) aaGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGt > 1:12413291/1‑101 (MQ=255) aaGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGt > 1:11024614/1‑101 (MQ=255) aaGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGt < 1:518732/101‑1 (MQ=255) gCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTc < 1:12997557/101‑1 (MQ=255) gCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTc < 1:7258045/101‑1 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTcc > 1:2529560/1‑101 (MQ=255) aCTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCgg > 1:3573505/1‑101 (MQ=255) aCTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCgg > 1:4316599/1‑101 (MQ=255) ttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTc > 1:4834733/1‑101 (MQ=255) ctcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCaa < 1:10017585/101‑1 (MQ=255) ctcGGCAAAACCGATTTCGTGGGCCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCTCAGTTCCGGGTCaa > 1:700087/1‑101 (MQ=255) tcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAag > 1:13709542/1‑101 (MQ=255) cGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAaga > 1:10852623/1‑101 (MQ=255) cGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAaga < 1:15176875/101‑1 (MQ=255) ggCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAagag < 1:7931450/101‑1 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg < 1:4465223/101‑1 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:11438297/1‑101 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:2716201/1‑101 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:10364834/1‑101 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:12881924/1‑101 (MQ=255) aaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGaa < 1:968091/101‑1 (MQ=255) aaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGaa > 1:9855930/1‑101 (MQ=255) aCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAg < 1:14880382/101‑1 (MQ=255) ccatctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTc < 1:3805019/96‑1 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc > 1:7143644/1‑101 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:6388866/101‑1 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:594240/101‑1 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCTTGCATAACCTTCAGCACTTCA‑TGACGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:6878369/1‑101 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:13372277/1‑101 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:11553549/1‑101 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:12242099/1‑101 (MQ=255) tctCGTGCGTCACGACGACCATGGTCATACCCTT‑ATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCggc > 1:5267345/3‑100 (MQ=255) ttCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGtt > 1:13139349/1‑101 (MQ=255) ctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCggct < 1:7607052/100‑3 (MQ=255) cGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtca < 1:5823501/101‑1 (MQ=255) cGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtca > 1:11849451/1‑101 (MQ=255) cGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCtca < 1:7487150/101‑1 (MQ=255) cGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCtca > 1:8464191/1‑101 (MQ=255) gTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcat > 1:11159671/1‑101 (MQ=255) ggTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCaa > 1:1949192/1‑101 (MQ=255) ggTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCaa < 1:5561485/101‑1 (MQ=255) ggTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCaa < 1:9471865/101‑1 (MQ=255) tCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAAc > 1:8950885/1‑101 (MQ=255) tCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAAc < 1:13483588/101‑1 (MQ=255) cACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACa < 1:11212451/101‑1 (MQ=255) aCGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAg > 1:6136877/1‑101 (MQ=255) gATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGca > 1:634208/1‑101 (MQ=255) aCCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGcatcat > 1:170537/1‑101 (MQ=255) cATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAttt > 1:3235398/1‑101 (MQ=255) aTCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAtttt < 1:6043203/101‑1 (MQ=255) aTCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAtttt < 1:6858601/101‑1 (MQ=255) aTCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAtttt > 1:2844030/1‑101 (MQ=255) aTCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAtttt > 1:4587629/1‑101 (MQ=255) gTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCgg < 1:4261394/101‑1 (MQ=255) gTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCgg > 1:6257838/1‑101 (MQ=255) cAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCt < 1:488843/101‑1 (MQ=255) t‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTc < 1:1630776/101‑1 (MQ=255) t‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTc > 1:4035543/1‑101 (MQ=255) cccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCa < 1:13871012/101‑1 (MQ=255) cccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCa > 1:10961042/1‑101 (MQ=255) cccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCa < 1:184041/101‑1 (MQ=255) ccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAc < 1:3341431/101‑1 (MQ=255) cttcttCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAcc < 1:4500279/101‑1 (MQ=255) cttcttCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAcc < 1:11303110/101‑1 (MQ=255) cttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGcc > 1:11616223/1‑101 (MQ=255) cttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGcc < 1:3683312/101‑1 (MQ=255) ttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCa < 1:4799477/101‑1 (MQ=255) ttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCa < 1:12547273/101‑1 (MQ=255) tcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAg < 1:12057510/101‑1 (MQ=255) tcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAg > 1:13032896/1‑101 (MQ=255) cAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgc < 1:12384288/101‑1 (MQ=255) cAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcgcgc > 1:15075138/1‑101 (MQ=255) aGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGcgcgcg > 1:8216632/1‑101 (MQ=255) gATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCgg < 1:5732915/101‑1 (MQ=255) aTCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCggg > 1:3918266/1‑101 (MQ=255) ccTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCa < 1:5419950/101‑1 (MQ=255) gCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATc < 1:3072053/101‑1 (MQ=255) gCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATc < 1:7548609/101‑1 (MQ=255) tAACCTTCAGCACTTCA‑TGGCGCAGTTGCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGcc > 1:14703227/1‑101 (MQ=255) cTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCacac > 1:14443603/1‑101 (MQ=255) cTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCacac < 1:15025024/101‑1 (MQ=255) ttCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACg > 1:8258833/1‑101 (MQ=255) tCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgc < 1:9141399/101‑1 (MQ=255) tCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgc < 1:8494835/101‑1 (MQ=255) cAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgct < 1:9303085/101‑1 (MQ=255) gCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgc < 1:9377907/101‑1 (MQ=255) gCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgc > 1:10047285/1‑101 (MQ=255) gCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgc > 1:12202984/1‑101 (MQ=255) cACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgct < 1:10678968/101‑1 (MQ=255) cACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgct < 1:10373283/101‑1 (MQ=255) aCTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGctgctg > 1:6576414/1‑101 (MQ=255) cTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGt < 1:1532189/101‑1 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt > 1:7834054/1‑101 (MQ=255) tCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTg < 1:14166924/101‑1 (MQ=255) a‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGac > 1:5879515/1‑101 (MQ=255) tGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGacc > 1:8899664/1‑101 (MQ=255) cgcAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGaccacc < 1:9726491/101‑1 (MQ=255) | CCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGACCACC > NC_007779/846271‑846471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |