| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,314 | G→C | 15.7% | A161A (GCG→GCC) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,314 | 0 | G→C | 15.7% | 133.7 0.0 ‑0.0 | 275 | A161A (GCG→GCC) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (20/23): ref base (108/123): total (129/146) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.78e-01 | ||||||||||
Only 100 of 282 total aligned reads displayed.
AAACGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGA > NC_007779/1485214‑1485414 | aaaCGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCg < 1:133281/101‑1 (MQ=255)aaaCGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCg > 1:1965793/1‑101 (MQ=255) aaCGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCgg > 1:2300290/1‑101 (MQ=255) aCGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGga < 1:11276944/101‑1 (MQ=255) cGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGgag < 1:13380034/101‑1 (MQ=255) cGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGgag > 1:8927368/1‑101 (MQ=255) ggAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGgaga > 1:5957703/1‑101 (MQ=255) gAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGAt > 1:3290921/1‑101 (MQ=255) aGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATc < 1:6524299/101‑1 (MQ=255) ccGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCa > 1:2905330/1‑101 (MQ=255) gggCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGc < 1:14089244/101‑1 (MQ=255) gggCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGc > 1:6208939/1‑101 (MQ=255) gCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCaa > 1:10458138/1‑101 (MQ=255) gCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCaa < 1:8623219/101‑1 (MQ=255) cGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAg < 1:9233770/101‑1 (MQ=255) ggTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGa > 1:12647393/1‑101 (MQ=255) gCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGc > 1:4492358/1‑101 (MQ=255) cATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGcc > 1:15194983/1‑101 (MQ=255) aTCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCct > 1:11353907/1‑101 (MQ=255) cGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCctgc < 1:4189739/101‑1 (MQ=255) cGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCctgc < 1:8103844/101‑1 (MQ=255) ggTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCctgct > 1:2991061/1‑101 (MQ=255) ttACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑a < 1:8871852/101‑1 (MQ=255) ttACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑a > 1:12802072/1‑101 (MQ=255) gTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTa < 1:10272014/101‑1 (MQ=255) gCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACg < 1:12019897/101‑1 (MQ=255) gCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACg < 1:1943328/101‑1 (MQ=255) gTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGac < 1:11098785/101‑1 (MQ=255) tttCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGaca > 1:8326576/1‑101 (MQ=255) ttCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGacac > 1:5224738/1‑101 (MQ=255) ttCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGacac > 1:4225550/1‑101 (MQ=255) cAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTa < 1:12688863/101‑1 (MQ=255) gCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATc > 1:1447910/1‑101 (MQ=255) gCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATc < 1:8273908/101‑1 (MQ=255) cGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCa < 1:9030433/101‑1 (MQ=255) gATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCat > 1:3643357/1‑101 (MQ=255) aTCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCatt < 1:1767439/101‑1 (MQ=255) aTCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCatt > 1:15125803/1‑101 (MQ=255) aTCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCatt < 1:337508/101‑1 (MQ=255) cACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCattat > 1:10924925/1‑101 (MQ=255) aCGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCattatt < 1:6455629/101‑1 (MQ=255) aCGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCattatt < 1:3532550/101‑1 (MQ=255) cGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTg < 1:10672709/101‑1 (MQ=255) tAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGAc > 1:6506853/1‑101 (MQ=255) aaGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGAca > 1:6801021/1‑100 (MQ=255) aaGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACg > 1:10484389/1‑101 (MQ=255) gTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGaa < 1:4930963/101‑1 (MQ=255) tAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAgcgc > 1:13673119/1‑101 (MQ=255) aaCACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCGTTATTGACGAAGCGCa < 1:12952743/101‑1 (MQ=255) cacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACg < 1:9788019/101‑1 (MQ=255) acGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGa > 1:8738791/1‑101 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc > 1:2929491/1‑101 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc > 1:850216/1‑101 (MQ=255) ctgcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAAc > 1:10192952/11‑101 (MQ=255) tgcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACg > 1:4116630/10‑101 (MQ=255) cattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACgta < 1:8748867/94‑3 (MQ=255) attaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAg > 1:14778446/7‑101 (MQ=255) ttaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGc > 1:2787358/6‑101 (MQ=255) taaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGcc > 1:11159956/5‑101 (MQ=255) aaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCt < 1:10112715/98‑1 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt > 1:11847058/1‑101 (MQ=255) aacTGATGACCGACGGTATCCTGCTGGCCGGAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCtc > 1:11981933/3‑100 (MQ=255) aacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCtc > 1:12984043/3‑100 (MQ=255) aacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCtc > 1:5439804/3‑100 (MQ=255) gCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGa < 1:1176458/101‑1 (MQ=255) gCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGa < 1:9899642/101‑1 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGaa < 1:1703426/101‑1 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaa > 1:9707292/1‑101 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaac > 1:1497193/1‑100 (MQ=255) gatgaCCGACGGTATCCTGCTGGCGGAGATCCACCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAata > 1:13978247/1‑101 (MQ=255) atgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAatat < 1:6266543/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:2057405/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:9534727/101‑1 (MQ=255) gaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCg < 1:11418665/101‑1 (MQ=255) gaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCg < 1:10562379/101‑1 (MQ=255) aCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGa > 1:4524842/1‑101 (MQ=255) ccGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAt < 1:5847932/101‑1 (MQ=255) cGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGact < 1:7178282/101‑3 (MQ=255) gACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGActt < 1:13188556/101‑1 (MQ=255) aCGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttt > 1:10359572/1‑101 (MQ=255) aCGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttt > 1:2457248/1‑101 (MQ=255) cGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAttttt > 1:13543730/1‑101 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt < 1:10789337/101‑1 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt > 1:14686481/1‑101 (MQ=255) gTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTg < 1:8149494/101‑1 (MQ=255) gTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTg > 1:5535186/1‑101 (MQ=255) aTCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCt > 1:12474847/1‑101 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc < 1:4576531/101‑1 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc < 1:3447634/101‑1 (MQ=255) ccTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCg < 1:11063078/101‑1 (MQ=255) ccTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCg < 1:7396235/101‑1 (MQ=255) gctgGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCt > 1:14246235/1‑101 (MQ=255) ctgGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTa > 1:6315258/1‑101 (MQ=255) tgGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAt > 1:9299394/1‑101 (MQ=255) ggCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAtt < 1:7697325/101‑1 (MQ=255) ggCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAtt < 1:9346308/101‑1 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg < 1:1213533/101‑1 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg > 1:13165848/1‑101 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg < 1:4824941/101‑1 (MQ=255) ggAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGa < 1:8600740/101‑1 (MQ=255) | AAACGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGA > NC_007779/1485214‑1485414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |