| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,353 | T→C | 17.5% | T174T (ACT→ACC) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,353 | 0 | T→C | 17.5% | 150.2 ‑1.0 ‑1.2 | 292 | T174T (ACT→ACC) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (28/23): ref base (113/128): total (141/151) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.55e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.01e-02 | ||||||||||
Only 100 of 296 total aligned reads displayed.
TCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATT > NC_007779/1485253‑1485452 | tCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACt < 1:5498653/101‑1 (MQ=255) gATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCat > 1:7029044/1‑101 (MQ=255) aTCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCatt > 1:15125803/1‑101 (MQ=255) aTCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCatt < 1:337508/101‑1 (MQ=255) aTCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCatt < 1:9091736/101‑1 (MQ=255) cACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCattat > 1:10924925/1‑101 (MQ=255) aCGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCattatt > 1:4697133/1‑101 (MQ=255) tAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGAc > 1:6506853/1‑101 (MQ=255) aaGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACg > 1:10484389/1‑101 (MQ=255) gTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGaa < 1:10587101/101‑1 (MQ=255) tGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAg > 1:13280977/1‑101 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgc < 1:1455715/101‑1 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgc < 1:900435/101‑1 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgc < 1:8876595/101‑1 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgc > 1:11538457/1‑101 (MQ=255) tAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgcgc > 1:13673119/1‑101 (MQ=255) tAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgcgc > 1:10327900/1‑101 (MQ=255) aaCACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGCGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCa > 1:1735524/1‑101 (MQ=255) aaCACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCa > 1:9340610/1‑101 (MQ=255) acacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCAc < 1:5412860/101‑1 (MQ=255) acacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCAc < 1:10431926/101‑1 (MQ=255) cacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACg < 1:9788019/101‑1 (MQ=255) acGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGa > 1:8738791/1‑101 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc < 1:1908685/101‑1 (MQ=255) aTGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACg > 1:10682854/1‑101 (MQ=255) gcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGc < 1:12976079/93‑1 (MQ=255) ggTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCa > 1:6400825/1‑101 (MQ=255) cattaaGCTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGCCACCATCATCATCGATGAGGCGCACGAACGCa < 1:8748868/97‑1 (MQ=255) gTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAg < 1:1216389/101‑1 (MQ=255) ttaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGc > 1:1628036/6‑101 (MQ=255) taaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGcc < 1:9898031/97‑1 (MQ=255) taaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGcc > 1:12680382/5‑101 (MQ=255) cAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGcc < 1:2805881/101‑1 (MQ=255) aaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCt < 1:10112715/98‑1 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt > 1:11847058/1‑101 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt < 1:2848095/101‑1 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaa > 1:9707292/1‑101 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAat < 1:8125621/101‑1 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAat < 1:5646730/101‑1 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaac > 1:1497193/1‑100 (MQ=255) gatgaCCGACGGTATCCTGCTGGCGGAGATCCACCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAata > 1:13978247/1‑101 (MQ=255) atgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAatat < 1:6266543/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATc > 1:14221920/1‑101 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:9534727/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:4552060/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:14765914/101‑1 (MQ=255) ccGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAt < 1:5847932/101‑1 (MQ=255) gACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAttt < 1:4050615/101‑1 (MQ=255) gACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGActt > 1:12485954/1‑101 (MQ=255) gACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGActt < 1:12982069/101‑1 (MQ=255) cGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAttttt > 1:13543730/1‑101 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt < 1:7993478/101‑1 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt < 1:10789337/101‑1 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc < 1:2937804/101‑1 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc < 1:3447634/101‑1 (MQ=255) ccTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCg < 1:7396235/101‑1 (MQ=255) ccTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCg < 1:11063078/101‑1 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg < 1:11179150/101‑1 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg > 1:8188290/1‑101 (MQ=255) tgctgGCTGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGc > 1:4892257/1‑101 (MQ=255) gctgGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCt > 1:6492332/1‑101 (MQ=255) ggCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAtt < 1:7697325/101‑1 (MQ=255) gCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAttt < 1:8347638/101‑1 (MQ=255) ggAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGa < 1:8600740/101‑1 (MQ=255) gagaTCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaa < 1:3607151/101‑1 (MQ=255) agaTCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaaa > 1:8578481/1‑101 (MQ=255) gaTCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag > 1:10249893/1‑101 (MQ=255) aTCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAaga > 1:1138236/1‑101 (MQ=255) tCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACACAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag < 1:11973369/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt < 1:5563301/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt > 1:439161/1‑101 (MQ=255) ccAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt < 1:11424631/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt > 1:14465312/1‑101 (MQ=255) cAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGtt < 1:262700/101‑1 (MQ=255) aGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtg > 1:3357257/1‑101 (MQ=255) aGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtg > 1:243344/1‑101 (MQ=255) cAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgct > 1:13176394/1‑101 (MQ=255) aaGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgctg < 1:13949483/101‑1 (MQ=255) aaGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgctg > 1:12422025/1‑101 (MQ=255) ccGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAACGAGTTGCTGCcgc < 1:12943743/101‑1 (MQ=255) ccGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgc < 1:194799/101‑1 (MQ=255) ccGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgc > 1:2317145/1‑101 (MQ=255) cGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgcg < 1:6607050/101‑1 (MQ=255) gCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcgg > 1:12810760/1‑101 (MQ=255) gCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcgg < 1:2789391/101‑1 (MQ=255) ccTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggc > 1:12054253/1‑101 (MQ=255) ccTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggc < 1:11130685/101‑1 (MQ=255) ctgctg‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggcg > 1:6086091/1‑101 (MQ=255) gctg‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTc > 1:9499171/1‑101 (MQ=255) g‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTg > 1:3278864/1‑101 (MQ=255) tgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCcca > 1:3005245/7‑100 (MQ=255) tgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCcca > 1:9267154/7‑100 (MQ=255) tgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGatc > 1:4175414/3‑99 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCt < 1:2537861/101‑1 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTa > 1:13022692/1‑101 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTa > 1:13337829/1‑101 (MQ=255) aGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCtg > 1:525263/1‑100 (MQ=255) tACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTaaa < 1:7179327/101‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:11672229/101‑1 (MQ=255) cTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCAtt > 1:14482400/1‑101 (MQ=255) | TCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATT > NC_007779/1485253‑1485452 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |