| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,365 | C→T | 19.2% | D178D (GAC→GAT) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,365 | 0 | C→T | 19.2% | 158.2 ‑1.2 ‑1.7 | 287 | D178D (GAC→GAT) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (30/25): ref base (106/126): total (136/151) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.93e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.83e-02 | ||||||||||
Only 100 of 297 total aligned reads displayed.
TAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGA > NC_007779/1485265‑1485465 | tAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGAc < 1:6520986/101‑1 (MQ=255) aaGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACg > 1:10484389/1‑101 (MQ=255) gTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGaa < 1:10587101/101‑1 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAgc < 1:900435/101‑1 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAgc < 1:8876595/101‑1 (MQ=255) aaCACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGCGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCa > 1:1735524/1‑101 (MQ=255) acacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCAc < 1:5412860/101‑1 (MQ=255) cacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACg < 1:9788019/101‑1 (MQ=255) acGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGa > 1:8738791/1‑101 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc > 1:850216/1‑101 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc > 1:2929491/1‑101 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc < 1:1908685/101‑1 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc < 1:14106979/101‑1 (MQ=255) ctgcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAAc > 1:10192952/11‑101 (MQ=255) tgcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACg > 1:4116630/10‑101 (MQ=255) aTGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACg > 1:13928412/1‑101 (MQ=255) ggTCAAGCGGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCa < 1:11308690/101‑1 (MQ=255) cattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCa < 1:11621582/94‑1 (MQ=255) cattaaGCTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGCCACCATCATCATCGATGAGGCGCACGAACGCa < 1:8748868/97‑1 (MQ=255) attaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAg < 1:13327135/95‑1 (MQ=255) ttaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGc > 1:1628036/6‑101 (MQ=255) tCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGc < 1:924345/101‑1 (MQ=255) taaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGcc < 1:9898031/97‑1 (MQ=255) taaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGcc > 1:11159956/5‑101 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt > 1:14525449/1‑101 (MQ=255) aacTGATGACCGACGGTATCCTGCTGGCCGGAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCtc > 1:11981933/3‑100 (MQ=255) aGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTg < 1:13668354/101‑1 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaa > 1:9707292/1‑101 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAat < 1:5646730/101‑1 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaac < 1:10810858/101‑2 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaac < 1:6212919/101‑2 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaac > 1:15081843/1‑100 (MQ=255) gatgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAata < 1:4212323/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:9534727/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:2057405/101‑1 (MQ=255) aCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGa > 1:4524842/1‑101 (MQ=255) ccGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAt < 1:5847932/101‑1 (MQ=255) gACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAttt < 1:11388385/101‑1 (MQ=255) aCGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttt < 1:2995911/101‑1 (MQ=255) aCGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttt > 1:10359572/1‑101 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt > 1:14686481/1‑101 (MQ=255) gTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTg < 1:8149494/101‑1 (MQ=255) aTCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCt > 1:4869352/1‑101 (MQ=255) aTCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCt > 1:12474847/1‑101 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc < 1:4576531/101‑1 (MQ=255) ccTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCg < 1:7396235/101‑1 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg > 1:12118113/1‑101 (MQ=255) gctgGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCt > 1:6492332/1‑101 (MQ=255) ctgGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTa > 1:6315258/1‑101 (MQ=255) tgGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAt > 1:9299394/1‑101 (MQ=255) gCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAttt > 1:7694378/1‑101 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg > 1:13165848/1‑101 (MQ=255) ggAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGa > 1:8625423/1‑101 (MQ=255) gagaTCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaa < 1:12165496/101‑1 (MQ=255) gagaTCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaa > 1:3444531/1‑101 (MQ=255) gaTCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag < 1:13967165/101‑1 (MQ=255) tCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag > 1:1300767/1‑101 (MQ=255) tCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag < 1:5469780/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt < 1:5563301/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt > 1:12944291/1‑101 (MQ=255) ccAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt < 1:10688109/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt > 1:14465312/1‑101 (MQ=255) cAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGtt < 1:262700/101‑1 (MQ=255) aGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtg > 1:3357257/1‑101 (MQ=255) aGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtg > 1:243344/1‑101 (MQ=255) gCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgc > 1:12979355/1‑101 (MQ=255) cAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgct < 1:7736796/101‑1 (MQ=255) aaGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgctg > 1:13515477/1‑101 (MQ=255) ccGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgc > 1:2317145/1‑101 (MQ=255) gCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcgg > 1:12810760/1‑101 (MQ=255) ccTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggc > 1:13192783/1‑101 (MQ=255) ccTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCAGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggc < 1:11941338/101‑1 (MQ=255) ctgctg‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggcg > 1:6086091/1‑101 (MQ=255) ctgctg‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggcg > 1:2790409/1‑101 (MQ=255) ctgctg‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggcg > 1:8578834/1‑101 (MQ=255) gctg‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTc > 1:9499171/1‑101 (MQ=255) g‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTg > 1:3278864/1‑101 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCt < 1:2537861/101‑1 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTaa < 1:5198445/101‑1 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTaa > 1:2824217/1‑101 (MQ=255) tACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTaaa < 1:7179327/101‑1 (MQ=255) tACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTgaa > 1:10262897/1‑101 (MQ=255) aCGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTgaag > 1:11052337/1‑100 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:11129884/1‑101 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTA‑TTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATc < 1:11445825/101‑1 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:3532770/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCa > 1:6727268/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:14544982/101‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:7132019/101‑1 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt < 1:10059177/101‑1 (MQ=255) ttattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACt > 1:1167372/1‑101 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTc < 1:3144038/101‑1 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTc > 1:12673729/1‑101 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:3966340/101‑1 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:14909177/101‑1 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:12250263/101‑1 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc < 1:7994976/101‑1 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc < 1:5322772/101‑1 (MQ=255) aCGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTACcgcg < 1:8069402/101‑1 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa > 1:3697813/1‑101 (MQ=255) | TAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑ATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGA > NC_007779/1485265‑1485465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |