| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,399 | T→C | 13.8% | L190L (TTG→CTG) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,399 | 0 | T→C | 13.8% | 103.4 ‑2.2 ‑0.1 | 270 | L190L (TTG→CTG) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (25/12): ref base (123/109): total (148/122) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.11e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.18e-01 | ||||||||||
Only 100 of 287 total aligned reads displayed.
CGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAA > NC_007779/1485299‑1485499 | cGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAttttt < 1:6432050/101‑1 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt < 1:7993478/101‑1 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt < 1:10789337/101‑1 (MQ=255) aTCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCt > 1:106891/1‑101 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc < 1:4576531/101‑1 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc < 1:2937804/101‑1 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg > 1:12118113/1‑101 (MQ=255) tgctgGCTGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGc > 1:4892257/1‑101 (MQ=255) ggCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAtt < 1:9346308/101‑1 (MQ=255) gCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAttt > 1:7694378/1‑101 (MQ=255) ggAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGa < 1:8600740/101‑1 (MQ=255) gagaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaa > 1:3444531/1‑101 (MQ=255) gagaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaa < 1:12165496/101‑1 (MQ=255) agaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaaa > 1:8578481/1‑101 (MQ=255) gaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag > 1:9011055/1‑101 (MQ=255) gaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag > 1:10249893/1‑101 (MQ=255) aTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag‑a > 1:1138236/1‑101 (MQ=255) tCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACACAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag‑ag < 1:11973369/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGt > 1:12944291/1‑101 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGt > 1:14465312/1‑101 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGt < 1:5563301/101‑1 (MQ=255) cAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGt‑t > 1:3366/1‑101 (MQ=255) gCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgc > 1:12979355/1‑101 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgct < 1:1914103/101‑1 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgct < 1:14924088/101‑1 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgct > 1:11632692/1‑101 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgct < 1:5758361/101‑1 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgct < 1:7736796/101‑1 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgctg < 1:13949483/101‑1 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgctg > 1:12422025/1‑101 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCcgcg < 1:6607050/101‑1 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCcgcg < 1:2613961/101‑1 (MQ=255) gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcgg > 1:2478575/1‑101 (MQ=255) gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcgg > 1:12810760/1‑101 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcggc > 1:13192783/1‑101 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcggc < 1:8910323/101‑1 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcggcg > 1:6086091/1‑101 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcggcg > 1:2790409/1‑101 (MQ=255) tgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCt < 1:6275974/101‑1 (MQ=255) gATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTg > 1:3278864/1‑101 (MQ=255) tgggTACGACACCTTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGatc > 1:10345927/4‑99 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCt < 1:731926/101‑1 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCt < 1:963632/101‑1 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCt < 1:9507275/101‑1 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTa > 1:13337829/1‑101 (MQ=255) tACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTaaa < 1:12178951/101‑1 (MQ=255) aCGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTgaag > 1:11052337/1‑100 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:11129884/1‑101 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTA‑TTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATc < 1:11445825/101‑1 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:3532770/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:13745790/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATc < 1:5525587/101‑1 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:14544982/101‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:535154/101‑1 (MQ=255) cTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCAtt > 1:14482400/1‑101 (MQ=255) caTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTa > 1:7170792/2‑101 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt < 1:11201564/101‑1 (MQ=255) attattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCAc > 1:10992547/1‑101 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTc > 1:12673729/1‑101 (MQ=255) atcgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTc > 1:3956228/10‑101 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:13249639/101‑1 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:4028757/101‑1 (MQ=255) cgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTcgg > 1:8287133/8‑99 (MQ=255) cgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTcgg < 1:2418693/94‑3 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc > 1:8727049/1‑101 (MQ=255) atgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggcg < 1:13050072/96‑1 (MQ=255) aCGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTACcgcg < 1:8069402/101‑1 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa > 1:3697813/1‑101 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCCGACCTAAAAATCATTATCACTTCCGCGAc < 1:10026633/101‑1 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCAATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGAc > 1:14706133/1‑101 (MQ=255) aggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcg > 1:13538455/3‑100 (MQ=255) aaGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACt < 1:9270545/101‑1 (MQ=255) gcgcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTAt < 1:10919504/101‑1 (MQ=255) gcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAG‑CATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAt > 1:7840199/1‑101 (MQ=255) cgcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATc > 1:3208317/1‑101 (MQ=255) cgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAtt > 1:9251501/1‑100 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg > 1:9824702/1‑101 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg > 1:14883856/1‑101 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg < 1:4647168/101‑1 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc < 1:4719531/101‑1 (MQ=255) aaCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCg < 1:14301890/101‑1 (MQ=255) aCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCgg > 1:7532279/1‑101 (MQ=255) cGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGa > 1:14041126/1‑101 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:10661814/101‑1 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:5945273/101‑1 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc > 1:1664889/1‑101 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:2687349/101‑1 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg < 1:4202280/101‑1 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg > 1:8815667/1‑101 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt < 1:8441368/101‑1 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc < 1:5278130/101‑1 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc < 1:7050919/101‑1 (MQ=255) atatCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcg > 1:6868633/1‑101 (MQ=255) atatCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcg > 1:1262010/1‑101 (MQ=255) tatCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgc > 1:5666068/1‑101 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgcg < 1:223373/101‑1 (MQ=255) tCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCgcgc > 1:2574735/1‑101 (MQ=255) cGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc > 1:8120677/1‑101 (MQ=255) cGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc > 1:11820300/1‑101 (MQ=255) gATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCa > 1:3104571/1‑101 (MQ=255) | CGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAA > NC_007779/1485299‑1485499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |