| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,413 | G→A | 11.4% | L194L (TTG→TTA) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,413 | 0 | G→A | 11.4% | 79.6 ‑1.6 ‑0.6 | 296 | L194L (TTG→TTA) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (22/11): ref base (139/120): total (164/132) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.94e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.49e-01 | ||||||||||
Only 100 of 303 total aligned reads displayed.
CGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTA > NC_007779/1485313‑1485513 | gagaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaa > 1:3444531/1‑101 (MQ=255) gaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag > 1:10249893/1‑101 (MQ=255) aTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag‑a > 1:1138236/1‑101 (MQ=255) tCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACACAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag‑ag < 1:11973369/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGt > 1:12944291/1‑101 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGt < 1:9283861/101‑1 (MQ=255) cAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGt‑t < 1:262700/101‑1 (MQ=255) aGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tg > 1:3357257/1‑101 (MQ=255) gCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgc > 1:12979355/1‑101 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgct < 1:7736796/101‑1 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgct > 1:11632692/1‑101 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgctg < 1:12439250/101‑1 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑tgctg > 1:3156792/1‑101 (MQ=255) ccGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCcgc < 1:194799/101‑1 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCcgcg < 1:9725121/101‑1 (MQ=255) gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcgg < 1:2789391/101‑1 (MQ=255) gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcgg > 1:8503504/1‑101 (MQ=255) gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcgg > 1:2478575/1‑101 (MQ=255) gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcgg > 1:12810760/1‑101 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcggc > 1:2603289/1‑101 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcggc < 1:8811653/101‑1 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcggc > 1:13192783/1‑101 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcggc < 1:5605123/101‑1 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCgcggcg > 1:3268442/1‑101 (MQ=255) gATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTg < 1:5719082/101‑1 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCt < 1:9507275/101‑1 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCt < 1:963632/101‑1 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTa < 1:12621872/101‑1 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTaa > 1:2824217/1‑101 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTaa < 1:5198445/101‑1 (MQ=255) tACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTaaa < 1:7179327/101‑1 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:11129884/1‑101 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTA‑TTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATc < 1:11445825/101‑1 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:3532770/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCa > 1:6727268/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:14544982/101‑1 (MQ=255) accaTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCAt < 1:4608619/98‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:535154/101‑1 (MQ=255) cTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCAtt > 1:14482400/1‑101 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt < 1:7410204/101‑1 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt < 1:11201564/101‑1 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt > 1:9006323/1‑101 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTc > 1:12673729/1‑101 (MQ=255) atcgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTc > 1:1215603/10‑101 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc > 1:1839522/1‑101 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc > 1:3807068/1‑101 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:3966340/101‑1 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:13249639/101‑1 (MQ=255) cgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTcgg < 1:2418693/94‑3 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc < 1:7994976/101‑1 (MQ=255) atgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggcg > 1:12319636/6‑101 (MQ=255) atgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggcg < 1:13050072/96‑1 (MQ=255) atgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggcg < 1:14983673/96‑1 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa > 1:3697813/1‑101 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa > 1:6114562/1‑101 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTGTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa < 1:3050549/101‑1 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCCGACCTAAAAATCATTATCACTTCCGCGAc < 1:10026633/101‑1 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCAATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGAc > 1:14706133/1‑101 (MQ=255) aggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcg < 1:1030276/99‑2 (MQ=255) ggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcga < 1:4195387/100‑3 (MQ=255) gcgcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTAt < 1:8586581/101‑1 (MQ=255) gcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAG‑CATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAt > 1:7840199/1‑101 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg > 1:14883856/1‑101 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg > 1:4683767/1‑101 (MQ=255) gAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAccc > 1:13438996/1‑101 (MQ=255) gAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAccc > 1:1361483/1‑101 (MQ=255) aaCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCg < 1:14301890/101‑1 (MQ=255) cGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGa > 1:14041126/1‑101 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:1083629/101‑1 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:5945273/101‑1 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc > 1:10919546/1‑101 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc > 1:1664889/1‑101 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg > 1:8083611/1‑101 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg > 1:5537264/1‑101 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt > 1:8634331/1‑101 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt > 1:8853200/1‑101 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc < 1:7050919/101‑1 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc < 1:5278130/101‑1 (MQ=255) atatCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcg > 1:6868633/1‑101 (MQ=255) atatCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcg > 1:830541/1‑101 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgcg > 1:14443970/1‑101 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgcg < 1:223373/101‑1 (MQ=255) tCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCgcgc > 1:2574735/1‑101 (MQ=255) cGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc > 1:11820300/1‑101 (MQ=255) gATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCa > 1:12177962/1‑101 (MQ=255) aTTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCAc > 1:11001739/1‑101 (MQ=255) ttttttGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACt > 1:10679974/1‑101 (MQ=255) ttttGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACttt < 1:9256051/101‑1 (MQ=255) tttGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCACGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta > 1:9211460/1‑101 (MQ=255) cTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa < 1:4063614/101‑1 (MQ=255) cTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa > 1:5875189/1‑101 (MQ=255) cGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATg > 1:10441964/1‑101 (MQ=255) ggCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgc < 1:10728694/101‑1 (MQ=255) ggCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgc < 1:4345862/101‑1 (MQ=255) ggCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgc > 1:1390551/1‑101 (MQ=255) cTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgcgc > 1:9830221/1‑101 (MQ=255) tATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGcc > 1:7567067/1‑101 (MQ=255) aTTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCg > 1:6270206/1‑101 (MQ=255) ttGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGat > 1:771502/1‑101 (MQ=255) gAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGatta > 1:6340090/1‑101 (MQ=255) | CGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTA > NC_007779/1485313‑1485513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |