Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_007779 | 1,485,419 | G→T | 12.4% | E196D (GAG→GAT) | hrpA → | ATP‑dependent helicase |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_007779 | 1,485,419 | 0 | G→T | 12.4% | 92.5 ‑1.6 ‑0.2 | 291 | E196D (GAG→GAT) | hrpA | ATP‑dependent helicase |
Reads supporting (aligned to +/- strand): new base (24/12): ref base (138/116): total (163/128) | ||||||||||
Fisher's exact test strand distribution p-value = 2.09e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.29e-01 |
Only 100 of 306 total aligned reads displayed.
TCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAG > NC_007779/1485319‑1485519 | tCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag < 1:5469780/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt > 1:12944291/1‑101 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt < 1:10688109/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt < 1:9283861/101‑1 (MQ=255) aGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtg > 1:3357257/1‑101 (MQ=255) aGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtg > 1:243344/1‑101 (MQ=255) gCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgc > 1:12979355/1‑101 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgct < 1:7736796/101‑1 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgct < 1:14924088/101‑1 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgct < 1:5758361/101‑1 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgct < 1:1914103/101‑1 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgctg < 1:13949483/101‑1 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgctg > 1:13515477/1‑101 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgctg > 1:3156792/1‑101 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgctg < 1:12439250/101‑1 (MQ=255) ccGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgc > 1:2317145/1‑101 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgcg < 1:6607050/101‑1 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgcg < 1:9725121/101‑1 (MQ=255) gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcgg > 1:12810760/1‑101 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggc > 1:12054253/1‑101 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCAGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggc < 1:11941338/101‑1 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggcg > 1:3268442/1‑101 (MQ=255) tgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGt > 1:14466937/1‑101 (MQ=255) tgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCcca > 1:3005245/7‑100 (MQ=255) cgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGa > 1:806806/5‑101 (MQ=255) tgggTACGACACCTTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGatc > 1:10345927/4‑99 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCt < 1:2537861/101‑1 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCt < 1:9507275/101‑1 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCt < 1:963632/101‑1 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTa < 1:12621872/101‑1 (MQ=255) aGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCtg > 1:525263/1‑100 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTaa < 1:5198445/101‑1 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAAt < 1:8820858/101‑1 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:11521384/1‑101 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:11129884/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:281583/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:13745790/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:3532770/1‑101 (MQ=255) accaTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCAt < 1:4608619/98‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:11672229/101‑1 (MQ=255) caTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTa > 1:7170792/2‑101 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt < 1:11201564/101‑1 (MQ=255) aTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTAt < 1:1452938/101‑1 (MQ=255) ttattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACt > 1:1217208/1‑101 (MQ=255) tattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACtt < 1:14607304/101‑1 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTc > 1:12673729/1‑101 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:3966340/101‑1 (MQ=255) gatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggc > 1:8786212/7‑101 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc < 1:5322772/101‑1 (MQ=255) atgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggcg < 1:13208481/96‑1 (MQ=255) atgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggcg < 1:13050072/96‑1 (MQ=255) atgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggcg > 1:12319636/6‑101 (MQ=255) tgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGa < 1:14154234/97‑1 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa > 1:6114562/1‑101 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa < 1:7027874/101‑1 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCCGACCTAAAAATCATTATCACTTCCGCGAc < 1:10026633/101‑1 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCAATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGAc > 1:14706133/1‑101 (MQ=255) aaGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACt < 1:5598839/101‑1 (MQ=255) ggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcga < 1:7612401/100‑3 (MQ=255) ggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcga < 1:4195387/100‑3 (MQ=255) gcgcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTAt < 1:8586581/101‑1 (MQ=255) gcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAt < 1:2773739/101‑1 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg > 1:4683767/1‑101 (MQ=255) gcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAttg > 1:850102/1‑99 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc > 1:14878246/1‑101 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc > 1:1554405/1‑101 (MQ=255) cGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAcc < 1:6815591/101‑1 (MQ=255) aCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCgg > 1:7532279/1‑101 (MQ=255) gCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGaa < 1:10660808/101‑1 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg < 1:11389627/101‑1 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt < 1:2600643/101‑1 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt > 1:13325197/1‑101 (MQ=255) atatCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcg > 1:830541/1‑101 (MQ=255) tatCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgc > 1:10847893/1‑101 (MQ=255) cGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc > 1:8120677/1‑101 (MQ=255) gATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCa > 1:7933610/1‑101 (MQ=255) ttttGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACttt < 1:9256051/101‑1 (MQ=255) ttttGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACttt < 1:10963665/101‑1 (MQ=255) tttGCTCGGCTATTTGAAAGAGTTGCTGCCACGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta > 1:9211460/1‑101 (MQ=255) cTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa < 1:4063614/101‑1 (MQ=255) tCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat > 1:3699074/1‑101 (MQ=255) tCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat < 1:1825848/101‑1 (MQ=255) cGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCGACTTTAATAATg > 1:2621999/1‑101 (MQ=255) cGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATg > 1:10258893/1‑101 (MQ=255) ggCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgc > 1:8959093/1‑101 (MQ=255) ggCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgc < 1:4345862/101‑1 (MQ=255) gCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgcg < 1:5682529/101‑1 (MQ=255) cTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgtgc < 1:10748484/101‑1 (MQ=255) cTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgcgc > 1:9830221/1‑101 (MQ=255) aTTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCg < 1:7715823/101‑1 (MQ=255) aTTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCg > 1:6270206/1‑101 (MQ=255) tttGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGa < 1:14422349/101‑1 (MQ=255) gAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGatta > 1:6340090/1‑101 (MQ=255) gAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGatta < 1:5920618/101‑1 (MQ=255) aaaGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattat > 1:6054256/1‑101 (MQ=255) aaGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattatt < 1:11028296/101‑1 (MQ=255) agagTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTg > 1:7310427/1‑101 (MQ=255) agagTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTg > 1:3454943/1‑101 (MQ=255) agTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGaa < 1:3861174/101‑1 (MQ=255) gTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAg > 1:2138383/1‑101 (MQ=255) | TCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAG > NC_007779/1485319‑1485519 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |