| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,434 | T→C | 13.2% | R201R (CGT→CGC) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,434 | 0 | T→C | 13.2% | 101.2 ‑1.5 ‑0.2 | 281 | R201R (CGT→CGC) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (25/12): ref base (137/107): total (162/119) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.15e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.70e-01 | ||||||||||
Only 100 of 286 total aligned reads displayed.
TGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCT > NC_007779/1485334‑1485534 | tgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGt > 1:14466937/1‑101 (MQ=255) gctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTc > 1:9499171/1‑101 (MQ=255) tgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCcca > 1:3005245/7‑100 (MQ=255) cgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGa > 1:806806/5‑101 (MQ=255) aTGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGa < 1:5286288/101‑1 (MQ=255) tgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGatc > 1:4175414/3‑99 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTa > 1:13337829/1‑101 (MQ=255) aCGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTgaag > 1:11052337/1‑100 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:11521384/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:281583/1‑101 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:7132019/101‑1 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt < 1:10059177/101‑1 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt < 1:7410204/101‑1 (MQ=255) aTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTAt < 1:1452938/101‑1 (MQ=255) attattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCAc > 1:10992547/1‑101 (MQ=255) attattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCAc < 1:5448238/101‑1 (MQ=255) ttattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACt > 1:1217208/1‑101 (MQ=255) ttattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACt > 1:1167372/1‑101 (MQ=255) atcgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTc > 1:3956228/10‑101 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:4028757/101‑1 (MQ=255) cgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTcgg > 1:572106/8‑99 (MQ=255) cgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTcgg > 1:8287133/8‑99 (MQ=255) atgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggcg < 1:13050072/96‑1 (MQ=255) tgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGa < 1:14154234/97‑1 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa > 1:3697813/1‑101 (MQ=255) gaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATTACTTCGGCGAc > 1:10438267/4‑101 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGAc > 1:13225163/1‑101 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCCGACCTAAAAATCATTATCACTTCCGCGAc < 1:10026633/101‑1 (MQ=255) aggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcg < 1:1030276/99‑2 (MQ=255) aggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcg > 1:13538455/3‑100 (MQ=255) aaGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACt < 1:9270545/101‑1 (MQ=255) gcgcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTAt > 1:9923122/1‑101 (MQ=255) gcgcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTAt < 1:10919504/101‑1 (MQ=255) cgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAtt > 1:9251501/1‑100 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg < 1:4647168/101‑1 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg > 1:9824702/1‑101 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg > 1:14883856/1‑101 (MQ=255) gcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAttg > 1:2422006/1‑99 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc < 1:4719531/101‑1 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc > 1:10773483/1‑101 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc < 1:7767123/101‑1 (MQ=255) cGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAcc > 1:13757528/1‑101 (MQ=255) aaCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCg > 1:12951342/1‑101 (MQ=255) cGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGa > 1:14041126/1‑101 (MQ=255) gCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGaa < 1:6458905/101‑1 (MQ=255) gCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGaa < 1:10660808/101‑1 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:1083629/101‑1 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc > 1:3235749/1‑101 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc > 1:1664889/1‑101 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg > 1:8083611/1‑101 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg > 1:8815667/1‑101 (MQ=255) tGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCttt > 1:4242211/1‑101 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt > 1:8634331/1‑101 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt > 1:6940188/1‑101 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt < 1:10690621/101‑1 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc < 1:6307069/101‑1 (MQ=255) atatCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcg > 1:1262010/1‑101 (MQ=255) tatCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgc > 1:5666068/1‑101 (MQ=255) tatCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgc < 1:12793518/101‑1 (MQ=255) tCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCgcgc > 1:2574735/1‑101 (MQ=255) gATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCa > 1:7933610/1‑101 (MQ=255) tttGCTCGGCTATTTGAAAG‑AGTTGCTGCCACGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta > 1:9211460/1‑101 (MQ=255) ttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaa < 1:11266621/101‑1 (MQ=255) cTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa < 1:14700853/101‑1 (MQ=255) cTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa > 1:3532755/1‑101 (MQ=255) tCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat < 1:1825848/101‑1 (MQ=255) tCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat < 1:15020340/101‑1 (MQ=255) tCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat < 1:11142085/101‑1 (MQ=255) cGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCGACTTTAATAATg > 1:2621999/1‑101 (MQ=255) ggCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgc > 1:8959093/1‑101 (MQ=255) ggCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgc < 1:6120822/101‑1 (MQ=255) gCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgcg > 1:12666951/1‑101 (MQ=255) gCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgcg < 1:7222974/101‑1 (MQ=255) tATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGcc > 1:7567067/1‑101 (MQ=255) tATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGcc > 1:678108/1‑101 (MQ=255) aTTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCg > 1:6270206/1‑101 (MQ=255) aTTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCg < 1:7715823/101‑1 (MQ=255) tttGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGa > 1:12438579/1‑101 (MQ=255) gAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGatta > 1:9687055/1‑101 (MQ=255) gAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGatta < 1:5920618/101‑1 (MQ=255) aaaG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattat > 1:6054256/1‑101 (MQ=255) aaaG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattat > 1:14571441/1‑101 (MQ=255) aaG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattatt > 1:14841258/1‑101 (MQ=255) ag‑agTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTg > 1:3454943/1‑101 (MQ=255) gTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAg > 1:8465697/1‑101 (MQ=255) gTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAg < 1:5245583/101‑1 (MQ=255) gTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAg > 1:2138383/1‑101 (MQ=255) ctgcCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGtctc < 1:9581446/101‑1 (MQ=255) tgcCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTcc > 1:12120513/1‑101 (MQ=255) gcCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCg > 1:4463873/1‑101 (MQ=255) ccGCGGCGTCCTGATCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCgg < 1:2398003/101‑1 (MQ=255) cgcgGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGt > 1:55285/1‑101 (MQ=255) gcggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTc < 1:372889/101‑1 (MQ=255) gcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGa < 1:7525527/101‑1 (MQ=255) gcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGa > 1:498212/1‑101 (MQ=255) cgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGAc > 1:7645950/1‑101 (MQ=255) cgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGAc < 1:3112704/101‑1 (MQ=255) cgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGAc > 1:12230941/1‑101 (MQ=255) gTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGAcc > 1:1954781/1‑101 (MQ=255) tCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCt > 1:14327939/1‑101 (MQ=255) | TGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCT > NC_007779/1485334‑1485534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |