Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 1,486,070 C→T 5.7% N413N (AAC→AAT)  hrpA → ATP‑dependent helicase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077791,486,0700C→T 5.7% 28.5 ‑1.6 ‑0.3281N413N (AAC→AAT) hrpAATP‑dependent helicase
Reads supporting (aligned to +/- strand):  new base (11/5):  ref base (133/132):  total (144/137)
Fisher's exact test strand distribution p-value = 1.99e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.94e-01

Only 100 of 289 total aligned reads displayed.

GCTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCG  >  NC_007779/1485970‑1486170
                                                                                                    |                                                                                                    
gCTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAAc                                                                                                      <  1:13542241/101‑1 (MQ=255)
gCTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAAc                                                                                                      >  1:8770604/1‑101 (MQ=255)
  tgtgGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCt                                                                                                    <  1:13249806/101‑1 (MQ=255)
     ggTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGc                                                                                                 >  1:9249346/1‑101 (MQ=255)
      gTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGcc                                                                                                >  1:7799907/1‑101 (MQ=255)
       tCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCt                                                                                               >  1:4684315/1‑101 (MQ=255)
        tgtgtgtCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTc                                                                                              <  1:9655597/100‑1 (MQ=255)
          tgtgtCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCgg                                                                                            >  1:10648583/1‑101 (MQ=255)
           gtgtCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGt                                                                                           <  1:12974631/101‑1 (MQ=255)
            tgtCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGtt                                                                                          <  1:12314101/101‑1 (MQ=255)
              tCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAt                                                                                        >  1:4064884/1‑101 (MQ=255)
               ccGAAGGGATCTGTATTCGTCTCTATGCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAtt                                                                                       <  1:14309865/101‑1 (MQ=255)
                cGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAttt                                                                                      <  1:809191/101‑1 (MQ=255)
                 gAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAtttt                                                                                     >  1:6238112/1‑101 (MQ=255)
                  aaGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTg                                                                                    <  1:14557775/101‑1 (MQ=255)
                   aGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGc                                                                                   <  1:15007078/101‑1 (MQ=255)
                    gggATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCa                                                                                  <  1:11542621/101‑1 (MQ=255)
                       aTCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGAt                                                                               >  1:7918641/1‑101 (MQ=255)
                       aTCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGAt                                                                               <  1:9162319/101‑1 (MQ=255)
                        tggcgaTTCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATg                                                                              >  1:4899886/6‑101 (MQ=255)
                        tCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATg                                                                              >  1:13985614/1‑101 (MQ=255)
                         ggcgaTTCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGa                                                                             <  1:4337437/97‑1 (MQ=255)
                         cTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGa                                                                             <  1:9498918/101‑1 (MQ=255)
                           gTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGAcc                                                                           <  1:1273533/101‑1 (MQ=255)
                           gTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGAcc                                                                           <  1:14940485/101‑1 (MQ=255)
                           cgaTTCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCCCCAATCTCGCTTCGGTTGTACTGCAAATGatt                                                                           <  1:9953383/99‑3 (MQ=255)
                            tATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACcg                                                                          <  1:1777107/101‑1 (MQ=255)
                            gaTTCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGattt                                                                          <  1:2562552/100‑4 (MQ=255)
                              ttCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCTCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACcgcg                                                                        <  1:12444458/101‑1 (MQ=255)
                                cGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgct                                                                      <  1:13991315/101‑1 (MQ=255)
                                cGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgct                                                                      >  1:4173466/1‑101 (MQ=255)
                                 gTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGatttcgttg                                                                     <  1:9372805/101‑9 (MQ=255)
                                  tctcTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctgg                                                                    >  1:7419424/1‑101 (MQ=255)
                                   ctctATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggg                                                                   <  1:14608287/101‑1 (MQ=255)
                                   ctctATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggg                                                                   >  1:115226/1‑101 (MQ=255)
                                   ctctATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggg                                                                   <  1:8808953/101‑1 (MQ=255)
                                      tATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggct                                                                >  1:5680182/1‑101 (MQ=255)
                                      tATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggct                                                                >  1:9435675/1‑101 (MQ=255)
                                       aTTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggctg                                                               >  1:11145654/1‑101 (MQ=255)
                                          ccGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGc                                                            >  1:12268305/1‑101 (MQ=255)
                                          ccGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGc                                                            >  1:5436561/1‑101 (MQ=255)
                                          ccGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGc                                                            <  1:6803833/101‑1 (MQ=255)
                                           cGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGATTTCGTTGCGGCTTGGCg                                                           >  1:7020432/1‑101 (MQ=255)
                                           cGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCg                                                           >  1:3475750/1‑101 (MQ=255)
                                            gAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGa                                                          >  1:6132623/1‑101 (MQ=255)
                                             aaGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGat                                                         >  1:631991/1‑101 (MQ=255)
                                             aaGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGat                                                         >  1:8283424/1‑101 (MQ=255)
                                              aGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGata                                                        >  1:3399842/1‑101 (MQ=255)
                                               gACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGatat                                                       <  1:7675791/101‑1 (MQ=255)
                                               gACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGatat                                                       <  1:10147021/101‑1 (MQ=255)
                                                aCGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATc                                                      <  1:5949706/101‑1 (MQ=255)
                                                aCGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATc                                                      >  1:7469767/1‑101 (MQ=255)
                                                aCGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATc                                                      <  1:2229179/101‑1 (MQ=255)
                                                  gATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGc                                                    <  1:2962510/101‑1 (MQ=255)
                                                  gATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGc                                                    >  1:10188428/1‑101 (MQ=255)
                                                   aTTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCt                                                   <  1:11620299/101‑1 (MQ=255)
                                                   aTTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCt                                                   <  1:10484727/101‑1 (MQ=255)
                                                   aTTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCt                                                   <  1:9767441/101‑1 (MQ=255)
                                                       ccTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGt                                               <  1:3226724/101‑1 (MQ=255)
                                                       ccTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGt                                               >  1:1360521/1‑101 (MQ=255)
                                                        ctctCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGtt                                              >  1:14135898/1‑101 (MQ=255)
                                                        ctctCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGACGACCGCGCTGGGGCTGGGCGATATCGCTGCGtt                                              <  1:12145145/101‑1 (MQ=255)
                                                         tctcGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTc                                             <  1:15159701/101‑1 (MQ=255)
                                                           tcGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTccc                                           >  1:3682062/1‑101 (MQ=255)
                                                           tcGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTccc                                           <  1:12862320/101‑1 (MQ=255)
                                                            cgcgCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCg                                          <  1:889758/101‑1 (MQ=255)
                                                            cgcgCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCg                                          >  1:2703598/1‑101 (MQ=255)
                                                             gcgcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGt                                         <  1:7739038/101‑1 (MQ=255)
                                                              cgcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGtt                                        >  1:670198/1‑101 (MQ=255)
                                                              cgcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGtt                                        <  1:2718574/101‑1 (MQ=255)
                                                               gcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGttt                                       <  1:10584907/101‑1 (MQ=255)
                                                               gcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGttt                                       >  1:1137832/1‑101 (MQ=255)
                                                               gcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGttt                                       <  1:8526651/101‑1 (MQ=255)
                                                                gccGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCGCGGTGATTTTGCAGATGACCGCGCGGGGGCTGGGCGATATCGCTGCGTTCCCGTTTg                                      <  1:3374069/100‑1 (MQ=255)
                                                                cccGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTg                                      <  1:5855006/101‑1 (MQ=255)
                                                                cccCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGATTTCGTTGCGGCTTGGCGCGATTGAGGCCTTCCCCTTTg                                      >  1:2841105/1‑101 (MQ=255)
                                                                cccCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGATTTCGTTGCGGCTTGGCGCGATTGAGGCCTTCCCCTTTg                                      >  1:3832447/1‑101 (MQ=255)
                                                                 ccGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGt                                     >  1:6942899/1‑101 (MQ=255)
                                                                  cGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTc                                    <  1:5063253/101‑1 (MQ=255)
                                                                  cGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTc                                    >  1:844194/1‑101 (MQ=255)
                                                                   ggAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCg                                   >  1:1252431/1‑101 (MQ=255)
                                                                   ggAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCg                                   >  1:4514721/1‑101 (MQ=255)
                                                                      gTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAg                                <  1:6589461/101‑1 (MQ=255)
                                                                        ttACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCa                              <  1:4204364/101‑1 (MQ=255)
                                                                         tACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGATTTCGTTGCGGCTTGGCGCGATTGAGGCCTTCCCCTTTGTccagccac                             >  1:10373689/1‑94 (MQ=255)
                                                                           ccGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCATCg                           <  1:10747494/101‑1 (MQ=255)
                                                                           ccGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCg                           >  1:6473907/1‑101 (MQ=255)
                                                                             gATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGa                         >  1:4948177/1‑101 (MQ=255)
                                                                             gATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGa                         >  1:1844225/1‑101 (MQ=255)
                                                                                ccGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATaa                      >  1:5294997/1‑101 (MQ=255)
                                                                                 cGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATaaa                     >  1:1314053/1‑101 (MQ=255)
                                                                                 cGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATaaa                     >  1:10875385/1‑101 (MQ=255)
                                                                                          tGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATc            <  1:8989271/101‑1 (MQ=255)
                                                                                           gCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATcc           >  1:14061336/1‑101 (MQ=255)
                                                                                             gTACCAACCTGGCCTCGGTTATTTTGCGGATGACCGAGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAg         >  1:12070926/1‑101 (MQ=255)
                                                                                              tACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAgg        <  1:1636561/101‑1 (MQ=255)
                                                                                                 cAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATg     <  1:5579609/101‑1 (MQ=255)
                                                                                                 cAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATg     <  1:1568352/101‑1 (MQ=255)
                                                                                                 cAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATg     >  1:11838418/1‑101 (MQ=255)
                                                                                                   aCCTGGCCTCGGTTATTTCGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgc   >  1:5542048/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
GCTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCG  >  NC_007779/1485970‑1486170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.