| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,539,881 | T→C | 4.3% | K229K (AAA→AAG) | narY ← | nitrate reductase 2 (NRZ) subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,539,881 | 0 | T→C | 4.3% | 17.6 ‑2.2 ‑0.0 | 231 | K229K (AAA→AAG) | narY | nitrate reductase 2 (NRZ) subunit beta |
| Reads supporting (aligned to +/- strand): new base (2/8): ref base (104/117): total (106/125) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.14e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.96e-01 | ||||||||||
Only 100 of 252 total aligned reads displayed.
CGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTG > NC_007779/1539781‑1539981 | cGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAttttt > 1:10366130/1‑101 (MQ=255)cGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAttttt < 1:14641810/101‑1 (MQ=255) gCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAtttttt < 1:684437/101‑1 (MQ=255) aGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTg > 1:9134195/1‑101 (MQ=255) aGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTg > 1:13734358/1‑101 (MQ=255) aGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTg < 1:3728508/101‑1 (MQ=255) ggTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGt < 1:688337/101‑1 (MQ=255) gTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTa > 1:7086966/1‑101 (MQ=255) gTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTa < 1:8480660/101‑1 (MQ=255) tCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACgg < 1:3138612/101‑1 (MQ=255) tCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACgg > 1:8318721/1‑101 (MQ=255) cTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGa > 1:2239109/1‑101 (MQ=255) cTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGa > 1:12288892/1‑101 (MQ=255) cTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGa > 1:6218959/1‑101 (MQ=255) tGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGAc > 1:14314252/1‑101 (MQ=255) gAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACa < 1:13162073/101‑1 (MQ=255) acacGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCg > 1:14759248/1‑101 (MQ=255) acGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCt < 1:4893311/101‑1 (MQ=255) ggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTa > 1:812322/1‑101 (MQ=255) gtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTAt < 1:757966/101‑1 (MQ=255) gtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTAt > 1:4717149/1‑101 (MQ=255) tcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATg < 1:7839115/101‑1 (MQ=255) tcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATg < 1:4822838/101‑1 (MQ=255) cggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGc < 1:1757885/101‑1 (MQ=255) cggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGc < 1:12850267/101‑1 (MQ=255) cggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGc < 1:5961739/101‑1 (MQ=255) ggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGca > 1:3198913/1‑101 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGcaca > 1:6691419/1‑101 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGcaca < 1:747363/101‑1 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGcaca < 1:11303510/101‑1 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGcaca < 1:8011802/101‑1 (MQ=255) gACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACaaa > 1:579364/1‑101 (MQ=255) gACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACaaa < 1:4197590/101‑1 (MQ=255) gACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACaaa > 1:10698005/1‑101 (MQ=255) aCCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAAc < 1:6393848/101‑1 (MQ=255) ccGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACg > 1:10664361/1‑101 (MQ=255) ggACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACgcc < 1:12176727/101‑1 (MQ=255) tCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACgccagcc < 1:13992312/101‑1 (MQ=255) cAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACgccagcca > 1:2837870/1‑101 (MQ=255) aaTTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCAc < 1:14146497/101‑1 (MQ=255) tCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGc < 1:1002536/101‑1 (MQ=255) tGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCAtt > 1:2302653/1‑101 (MQ=255) tGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCAtt < 1:12788647/101‑1 (MQ=255) gggTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCAttt < 1:3617911/101‑1 (MQ=255) ggTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTa < 1:10923653/101‑1 (MQ=255) tAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATc < 1:1143789/101‑1 (MQ=255) aaCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATcc > 1:3061089/1‑101 (MQ=255) cAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTg > 1:13547319/1‑101 (MQ=255) cAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTg < 1:9289350/101‑1 (MQ=255) cAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTg < 1:9237704/101‑1 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGat < 1:4650256/101‑1 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGat < 1:381134/101‑1 (MQ=255) aagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGatc > 1:15133706/1‑101 (MQ=255) agaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGatca < 1:8909361/101‑1 (MQ=255) agaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGatca < 1:1181351/101‑1 (MQ=255) aTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaat > 1:4266997/1‑101 (MQ=255) tGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaatc > 1:15042804/1‑101 (MQ=255) tGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaatc < 1:5108495/101‑1 (MQ=255) cATTTTTCTGACTTGCCGCTTTTCCCGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAg > 1:5670498/1‑101 (MQ=255) tttttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGca < 1:11692552/101‑1 (MQ=255) tttttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGca > 1:7680058/1‑101 (MQ=255) ttttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcac < 1:7431485/101‑1 (MQ=255) tttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcaca < 1:11106913/101‑1 (MQ=255) ttaCTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGc > 1:2671169/3‑101 (MQ=255) aCTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCg > 1:8642287/1‑101 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt > 1:3359628/1‑101 (MQ=255) tGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtct < 1:1365334/101‑1 (MQ=255) cGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtcttct > 1:14887212/1‑101 (MQ=255) cGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTAGGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtcttct > 1:9524357/1‑101 (MQ=255) gCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTcttctt > 1:7817480/1‑101 (MQ=255) gCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTcttctt > 1:2940936/1‑101 (MQ=255) gCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTcttctt > 1:9771100/1‑101 (MQ=255) ttttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcg < 1:11497202/101‑1 (MQ=255) ttgtggTTGAAGTAGACCTTCTTGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGtcttctgtgcg < 1:1853834/96‑6 (MQ=255) ttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcgcg > 1:4478633/1‑101 (MQ=255) tCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGt > 1:6158310/1‑101 (MQ=255) cAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGttt > 1:8355826/1‑101 (MQ=255) ggTTGAAGTAGACCTTCTTGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTg < 1:2854706/100‑1 (MQ=255) aGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTg > 1:8540650/1‑101 (MQ=255) gTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGt > 1:13214881/1‑101 (MQ=255) gTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGt > 1:1256668/1‑101 (MQ=255) gTTGAAGTAGACCTTCTTGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGt > 1:8726545/1‑101 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa < 1:6141811/101‑1 (MQ=255) aaGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGAt > 1:11185699/1‑101 (MQ=255) aGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATa > 1:12692418/1‑101 (MQ=255) aGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATa < 1:2596023/101‑1 (MQ=255) gTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg > 1:15211594/1‑101 (MQ=255) gTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg > 1:10461190/1‑101 (MQ=255) tAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgc > 1:3503490/1‑101 (MQ=255) tAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgc < 1:12206973/101‑1 (MQ=255) aGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcg > 1:6095290/1‑101 (MQ=255) gATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcgc > 1:4969472/1‑101 (MQ=255) tttttttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTATATAGcgccg < 1:10118744/101‑1 (MQ=255) tttttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCt > 1:5340726/1‑101 (MQ=255) tttttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCt > 1:14544262/1‑101 (MQ=255) ttttGTACGGACAACCGCTTATGCACAAACGCCAGCCCCGGCATTTATCCTGATCAATAAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCtt > 1:6006081/1‑101 (MQ=255) tttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg > 1:13869473/1‑101 (MQ=255) tttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg > 1:1453008/1‑101 (MQ=255) tttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg < 1:11899325/101‑1 (MQ=255) tttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg > 1:9595473/1‑101 (MQ=255) | CGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTG > NC_007779/1539781‑1539981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |