| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,539,935 | A→G | 10.9% | I211I (ATT→ATC) | narY ← | nitrate reductase 2 (NRZ) subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,539,935 | 0 | A→G | 10.9% | 68.0 ‑3.7 ‑0.7 | 247 | I211I (ATT→ATC) | narY | nitrate reductase 2 (NRZ) subunit beta |
| Reads supporting (aligned to +/- strand): new base (9/18): ref base (125/95): total (134/113) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.46e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.80e-01 | ||||||||||
Only 100 of 271 total aligned reads displayed.
AGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGT > NC_007779/1539835‑1540035 | gCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaatca < 1:4556814/101‑1 (MQ=255) cATTTTTCTGACTTGCCGCTTTTCCCGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAg > 1:5670498/1‑101 (MQ=255) cATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAg > 1:6424128/1‑101 (MQ=255) cATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAg < 1:4436256/101‑1 (MQ=255) tttttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGca < 1:11692552/101‑1 (MQ=255) ttttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcac > 1:8133501/1‑101 (MQ=255) tCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAAt < 1:15133532/101‑1 (MQ=255) ttaCTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGc > 1:2671169/3‑101 (MQ=255) aCTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCg > 1:8642287/1‑101 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt > 1:3359628/1‑101 (MQ=255) ttGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtc < 1:9664220/101‑1 (MQ=255) tGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtct < 1:1569916/101‑1 (MQ=255) gCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtctt < 1:847646/101‑1 (MQ=255) cGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtcttct > 1:14887212/1‑101 (MQ=255) cGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtcttct < 1:8724947/101‑1 (MQ=255) cGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTAGGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtcttct > 1:9524357/1‑101 (MQ=255) gCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTcttctt > 1:9771100/1‑101 (MQ=255) gCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTcttctt > 1:12498290/1‑101 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:7577297/101‑1 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:5156890/101‑1 (MQ=255) ttttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcg > 1:7538811/1‑101 (MQ=255) ttttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcg < 1:11497202/101‑1 (MQ=255) gcttggggTTGAAGTAGACCTTCTTGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGtcttctgtg < 1:12757896/94‑4 (MQ=255) ttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcgcg > 1:5903765/1‑101 (MQ=255) ttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcgcg > 1:14118297/1‑101 (MQ=255) ttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcgcg < 1:4968393/101‑1 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt < 1:7916517/101‑1 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt < 1:13625751/101‑1 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt < 1:837618/101‑1 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt < 1:1111570/101‑1 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt < 1:10473154/101‑1 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt > 1:12275907/1‑101 (MQ=255) ggTTGAAGTAGACCTTCTTGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTg < 1:2854706/100‑1 (MQ=255) tGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAg > 1:8516740/1‑101 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa > 1:12115473/1‑101 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa < 1:5100912/101‑1 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa > 1:14640886/1‑101 (MQ=255) aaGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGAt > 1:11185699/1‑101 (MQ=255) aGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcg < 1:9269996/101‑1 (MQ=255) aGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcg > 1:6095290/1‑101 (MQ=255) gATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcgc < 1:10765627/101‑1 (MQ=255) gATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcgc > 1:11547479/1‑101 (MQ=255) tttttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCt > 1:5340726/1‑101 (MQ=255) tttttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCt > 1:3090119/1‑101 (MQ=255) ttttGTACGGACAACCGCTTATGCACAAACGCCAGCCCCGGCATTTATCCTGATCAATAAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCtt > 1:6006081/1‑101 (MQ=255) ttttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCtt > 1:2533137/1‑101 (MQ=255) tcttGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgat < 1:10960428/99‑5 (MQ=255) tcttGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgat < 1:3506489/99‑5 (MQ=255) tcttGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgat < 1:15046328/99‑5 (MQ=255) tttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg > 1:13869473/1‑101 (MQ=255) tttGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg > 1:1453008/1‑101 (MQ=255) cttGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgatg < 1:6152578/100‑6 (MQ=255) cttGTAGGGGCAACCGGAGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgatg < 1:2055013/100‑6 (MQ=255) tGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTggg > 1:7421327/1‑101 (MQ=255) gTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGc > 1:13932208/1‑101 (MQ=255) tACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCa > 1:8830257/1‑101 (MQ=255) aaCCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGcc < 1:7961461/101‑1 (MQ=255) aCCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCa < 1:1870694/101‑1 (MQ=255) aCCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCa > 1:10110177/1‑101 (MQ=255) ccGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCAc < 1:3462324/101‑1 (MQ=255) cGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACg < 1:1696355/101‑1 (MQ=255) cGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACg > 1:1800809/1‑101 (MQ=255) cGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACg < 1:1995997/101‑1 (MQ=255) cTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCa < 1:3000941/101‑1 (MQ=255) ttATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAg > 1:12890746/1‑101 (MQ=255) tATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGc > 1:6267891/1‑101 (MQ=255) aTGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCt > 1:835271/1‑101 (MQ=255) gCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTgg > 1:11687070/1‑101 (MQ=255) cacaAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTggg < 1:2342007/101‑1 (MQ=255) acaAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGa > 1:3202557/1‑101 (MQ=255) cGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAg > 1:1106104/1‑101 (MQ=255) ccagccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGc > 1:7198312/1‑101 (MQ=255) catccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTGCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCa < 1:904786/98‑1 (MQ=255) agccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAg > 1:4144170/1‑101 (MQ=255) agccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAg > 1:13150694/1‑101 (MQ=255) ccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAgtg > 1:466942/1‑101 (MQ=255) caCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAgtgt < 1:5530092/101‑1 (MQ=255) caCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAgtgt > 1:6757450/1‑101 (MQ=255) caCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAgtgt < 1:14345993/101‑1 (MQ=255) cGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTc > 1:4273514/1‑101 (MQ=255) ggCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCg > 1:2473126/1‑101 (MQ=255) gCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGc > 1:11988474/1‑101 (MQ=255) cATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGca > 1:371442/1‑101 (MQ=255) aTTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGcac > 1:2764741/1‑101 (MQ=255) ttATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAg < 1:6829107/101‑1 (MQ=255) ttATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAg < 1:345148/101‑1 (MQ=255) ttATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAg < 1:13284938/101‑1 (MQ=255) cggtCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGCGCCCGATGGGCAGGAAGACACACAGGTCGGGTTCAAGCAGTGCTCAcagat > 1:10408766/4‑98 (MQ=255) tCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGCGCCCGATGGGCAGGAAGACACACAGGTCGGGTTCAAGCAGTGCTCACAGATgcg > 1:4479957/1‑101 (MQ=255) tCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGgcg > 1:7680027/1‑101 (MQ=255) tCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGgcg > 1:5763459/1‑101 (MQ=255) ccTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGCGCCCGATGGGCAGGAAGACACACAGGTCGGGTTCAAGCAGTGCTCACAGATgcga > 1:88640/1‑100 (MQ=255) cTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGcgcg < 1:3259375/101‑1 (MQ=255) tGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCgg < 1:698088/101‑1 (MQ=255) tGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGACGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCgg > 1:7452805/1‑101 (MQ=255) gATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGc > 1:6188347/1‑101 (MQ=255) atcaatcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCCGGGATTGAGGCAGTGTTCGCACAGGCGCGGCa < 1:12615704/101‑1 (MQ=255) tcaatcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAg > 1:13690733/1‑101 (MQ=255) caatcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAgg > 1:11860995/1‑101 (MQ=255) aatcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGt < 1:1726239/101‑1 (MQ=255) | AGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGCTTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGT > NC_007779/1539835‑1540035 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |