| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,864,931 | C→T | 8.7% | S149S (TCC→TCT) | gapA → | glyceraldehyde‑3‑phosphate dehydrogenase A |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,864,931 | 0 | C→T | 8.7% | 60.0 ‑0.2 ‑0.0 | 288 | S149S (TCC→TCT) | gapA | glyceraldehyde‑3‑phosphate dehydrogenase A |
| Reads supporting (aligned to +/- strand): new base (14/11): ref base (153/110): total (167/121) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.35e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.42e-01 | ||||||||||
Only 100 of 292 total aligned reads displayed.
AAGTGGTTATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTC > NC_007779/1864831‑1865031 | aGTGGTTATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCt < 1:3125630/101‑1 (MQ=255) aGTGGTTATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCt < 1:7482926/101‑1 (MQ=255) gTGGTTATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTg > 1:13160112/1‑101 (MQ=255) ggTTATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGca > 1:12869249/1‑101 (MQ=255) ggTTATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGca > 1:12465762/1‑101 (MQ=255) ttATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGcacc > 1:1666517/1‑101 (MQ=255) aTGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGcaccac < 1:8719274/101‑1 (MQ=255) tGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCaccacc > 1:5891018/1‑101 (MQ=255) gTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGc > 1:8852418/1‑101 (MQ=255) gTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGc > 1:13871025/1‑101 (MQ=255) ccGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCt < 1:2624822/101‑1 (MQ=255) ccGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCt > 1:2592530/1‑101 (MQ=255) cGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTg < 1:4958872/101‑1 (MQ=255) gTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTgg > 1:8083527/1‑101 (MQ=255) gTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTgg > 1:1744946/1‑101 (MQ=255) tCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGc > 1:9037057/1‑101 (MQ=255) cTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCt < 1:10462305/101‑1 (MQ=255) cTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCt < 1:1882350/101‑1 (MQ=255) tAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAATTGCCTGGCTc > 1:484347/1‑101 (MQ=255) tAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTc < 1:7340724/101‑1 (MQ=255) aaaGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTcc < 1:7584241/101‑1 (MQ=255) aaaGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTcc > 1:2207692/1‑101 (MQ=255) gACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCt < 1:10548173/101‑1 (MQ=255) acaacaCTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTg > 1:12294725/1‑101 (MQ=255) caacaCTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTgg < 1:5625387/101‑1 (MQ=255) aacaCTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGc > 1:1458476/1‑101 (MQ=255) aacaCTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGACCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGc > 1:14627616/1‑101 (MQ=255) cacTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTa < 1:9508137/101‑1 (MQ=255) acTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTaa < 1:9158551/101‑1 (MQ=255) acTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTaa < 1:14457058/101‑1 (MQ=255) ccGATGTTCGTTAAAGGCGCTAACTTCTACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGt < 1:7301371/101‑1 (MQ=255) ccGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGt < 1:4079742/101‑1 (MQ=255) cGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGtt < 1:6193863/101‑1 (MQ=255) cGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGtt > 1:5809424/1‑101 (MQ=255) gATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTa > 1:6625547/1‑101 (MQ=255) gATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTa > 1:8367063/1‑101 (MQ=255) aTGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCCGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTAt < 1:10267353/101‑1 (MQ=255) tGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATc > 1:8598914/1‑101 (MQ=255) tGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATc > 1:10101704/1‑101 (MQ=255) tGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATc < 1:2899976/101‑1 (MQ=255) gTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCa < 1:3734054/101‑1 (MQ=255) ttCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCaa < 1:7726085/101‑1 (MQ=255) tCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAAc < 1:10030782/101‑1 (MQ=255) gTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGa < 1:5196094/101‑1 (MQ=255) gTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGa > 1:14659921/1‑101 (MQ=255) ttAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGAt > 1:14214305/1‑101 (MQ=255) tAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATa > 1:5233528/1‑101 (MQ=255) tAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATa > 1:9951887/1‑101 (MQ=255) aaGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATTAACGATAAc > 1:9701903/1‑101 (MQ=255) aGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACt < 1:4500289/101‑1 (MQ=255) aGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACt > 1:13311615/1‑101 (MQ=255) gcgcTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTc > 1:10796540/1‑101 (MQ=255) gcgcTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTc > 1:3476980/1‑101 (MQ=255) gcgcTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTc > 1:716397/1‑101 (MQ=255) cgcTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCg < 1:6318189/101‑1 (MQ=255) gcTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCgg > 1:8582755/1‑101 (MQ=255) gcTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCgg > 1:9440835/1‑101 (MQ=255) tAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGCTAACTTCGGca > 1:1237070/1‑101 (MQ=255) aaCTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGcat < 1:6730385/101‑1 (MQ=255) ttCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGcatc‑at > 1:8310663/1‑101 (MQ=255) ttCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGcatc‑at > 1:8936294/1‑101 (MQ=255) tCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCatc‑atc > 1:294014/1‑101 (MQ=255) cGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCg < 1:2481506/101‑1 (MQ=255) gACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGa > 1:6090997/1‑101 (MQ=255) cAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAg > 1:14877500/1‑101 (MQ=255) aaaTATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAgg > 1:11878474/1‑101 (MQ=255) atatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTc < 1:2675523/101‑1 (MQ=255) atatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTc > 1:14988334/1‑101 (MQ=255) atatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTACGGCATC‑ATCGAAGGTc > 1:6516692/1‑101 (MQ=255) atGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtg > 1:33038/1‑101 (MQ=255) tGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtga > 1:8423366/1‑101 (MQ=255) tGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtga > 1:13630893/1‑101 (MQ=255) gCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtgat < 1:12394885/101‑1 (MQ=255) gCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtgat < 1:5390564/101‑1 (MQ=255) cTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtgatg < 1:6023603/101‑1 (MQ=255) tGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtgatga < 1:6348096/101‑1 (MQ=255) tGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtgatga > 1:11570836/1‑101 (MQ=255) ccAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGacca > 1:6855906/1‑101 (MQ=255) ggACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCg < 1:12157340/101‑1 (MQ=255) caaCATCATTTCGAACGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGaccacca > 1:7942839/3‑100 (MQ=255) gACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGt < 1:1290080/101‑1 (MQ=255) aTCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCa > 1:6900476/1‑101 (MQ=255) cGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACg < 1:639955/101‑1 (MQ=255) gTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGc > 1:10332276/1‑101 (MQ=255) gTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGc > 1:12982535/1‑101 (MQ=255) tttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGct < 1:13559488/101‑1 (MQ=255) ttCGAACGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcat < 1:5930467/101‑3 (MQ=255) ttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGcta > 1:4231537/1‑101 (MQ=255) tcgaaCGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcata < 1:10978587/98‑4 (MQ=255) cgaaCGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcatac > 1:14443646/3‑97 (MQ=255) ccAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctact < 1:1281920/101‑1 (MQ=255) ccAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctact < 1:7871691/101‑1 (MQ=255) ccAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctact < 1:3556873/101‑1 (MQ=255) cAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctacta > 1:5340740/1‑101 (MQ=255) cAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctacta < 1:3228078/101‑1 (MQ=255) aaCGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCtactac > 1:566336/1‑101 (MQ=255) aCGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTAcc > 1:6235306/1‑101 (MQ=255) cGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCg < 1:4380426/101‑1 (MQ=255) gCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACNTCGGCATC‑ATCGAAGGTCTGATGANCACCGTTCACGCTNCTACCGc > 1:8955429/1‑101 (MQ=255) ccTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACt > 1:9323537/1‑101 (MQ=255) | AAGTGGTTATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTC > NC_007779/1864831‑1865031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |