| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,314,484 | C→G | 14.6% | T462T (ACG→ACC) | infB ← | fused protein chain initiation factor 2, IF2 |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,314,484 | 0 | C→G | 14.6% | 129.8 ‑1.2 ‑0.0 | 280 | T462T (ACG→ACC) | infB | fused protein chain initiation factor 2, IF2 |
| Reads supporting (aligned to +/- strand): new base (18/23): ref base (127/112): total (145/135) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.12e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.70e-01 | ||||||||||
Only 100 of 283 total aligned reads displayed.
AACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGTTTCAACGTGGTATGCA > NC_007779/3314385‑3314583 | caccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTg > 1:2998819/1‑101 (MQ=255) caccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTg > 1:5315051/1‑101 (MQ=255) caccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTg < 1:13700108/101‑1 (MQ=255) caccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCt < 1:10802340/101‑1 (MQ=255) caccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCt > 1:1793180/1‑101 (MQ=255) ccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTgc < 1:9131557/101‑1 (MQ=255) ccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTgc > 1:10759452/1‑101 (MQ=255) ggTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTgcgc < 1:7003420/101‑1 (MQ=255) tACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGcac > 1:7060813/1‑101 (MQ=255) tACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGcac > 1:13895370/1‑101 (MQ=255) aCCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGcacc > 1:3262545/1‑101 (MQ=255) cTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGcaccac < 1:6693327/101‑1 (MQ=255) gcgcCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGa < 1:11680717/101‑1 (MQ=255) gcgcCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGa > 1:5861331/1‑101 (MQ=255) gcgcCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGa > 1:471113/1‑101 (MQ=255) cgccgcTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAg > 1:10514381/1‑101 (MQ=255) gccgcTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGc < 1:8456716/101‑1 (MQ=255) cgcTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCAc < 1:4182565/101‑1 (MQ=255) cgcTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCAc < 1:10375566/101‑1 (MQ=255) cTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGc > 1:5465729/1‑101 (MQ=255) tCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCAtt < 1:244305/101‑1 (MQ=255) cgcgTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTg > 1:12026021/1‑101 (MQ=255) gcgTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGa < 1:15089707/101‑1 (MQ=255) gTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAg > 1:12303636/1‑101 (MQ=255) gTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAg < 1:13024815/101‑1 (MQ=255) tGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGt < 1:3660676/101‑1 (MQ=255) gCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTa < 1:6503817/101‑1 (MQ=255) gCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTa < 1:7220169/101‑1 (MQ=255) cTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTaa < 1:2103814/101‑1 (MQ=255) cTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTaa > 1:5149935/1‑101 (MQ=255) cTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTaa > 1:5738755/1‑101 (MQ=255) tGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTaaa > 1:3873024/1‑101 (MQ=255) tGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTaaa < 1:97140/101‑1 (MQ=255) gATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAAcg > 1:4488343/1‑101 (MQ=255) gATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAAcg > 1:2166879/1‑101 (MQ=255) aTTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAAcgc < 1:14050048/101‑1 (MQ=255) ttGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAAcgcg > 1:14237383/1‑101 (MQ=255) tGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACgcgg > 1:14123788/1‑101 (MQ=255) gCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACgcggc < 1:676372/101‑1 (MQ=255) gCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACgcggc < 1:12489711/101‑1 (MQ=255) cTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACgcggcg < 1:10008825/101‑1 (MQ=255) cTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACgcggcg < 1:13565463/101‑1 (MQ=255) tcaaccgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTg < 1:6119368/95‑1 (MQ=255) cGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGc < 1:6183972/101‑1 (MQ=255) accgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGacc < 1:7546040/98‑1 (MQ=255) accgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGacc < 1:8298122/98‑1 (MQ=255) tGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGcccc > 1:7914616/1‑101 (MQ=255) tGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGcccc < 1:14574766/101‑1 (MQ=255) ccgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGacca < 1:12592948/99‑2 (MQ=255) ccgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTCGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGacca < 1:11970985/99‑2 (MQ=255) cgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGaccag > 1:40357/2‑99 (MQ=255) cTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCgggg > 1:7259354/1‑101 (MQ=255) tGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGgt > 1:7821639/1‑101 (MQ=255) tGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGgt > 1:9853572/1‑101 (MQ=255) tGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGgt > 1:11321158/1‑101 (MQ=255) tGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGgt < 1:1679116/101‑1 (MQ=255) ggCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGGTATc < 1:1928272/101‑1 (MQ=255) gCATCACCCCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTcc < 1:10235364/101‑1 (MQ=255) gCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTcc < 1:11177971/101‑1 (MQ=255) aTCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAg > 1:4095983/1‑101 (MQ=255) tCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAgg < 1:5129225/101‑1 (MQ=255) cgccGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGGTATCCAAGAAg < 1:9588472/99‑1 (MQ=255) cacCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAg < 1:8101296/101‑1 (MQ=255) gccGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGGTATCCAAGAAgg > 1:4593909/2‑101 (MQ=255) acCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAgg > 1:3805871/1‑101 (MQ=255) ccGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGt < 1:9408597/101‑1 (MQ=255) ccGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGt < 1:7439972/101‑1 (MQ=255) ccGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGGTATCCAAGAAGGt > 1:865329/1‑101 (MQ=255) ccGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGGTATCCAAGAAGGt < 1:1437328/101‑1 (MQ=255) cgtcgtCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTg > 1:2665275/1‑101 (MQ=255) cgtcgtCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTg < 1:352215/101‑1 (MQ=255) cgtcatCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGGTATCCAAGAAGGta < 1:12847049/101‑2 (MQ=255) gtcgtcGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGa > 1:8723562/1‑101 (MQ=255) cgtcgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATc > 1:997525/1‑101 (MQ=255) cgtcgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATc < 1:8222481/101‑1 (MQ=255) cgtcgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATc > 1:4952133/1‑101 (MQ=255) cgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCTGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATg > 1:8886772/1‑101 (MQ=255) cgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATg < 1:13531165/101‑1 (MQ=255) cgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATg > 1:2973512/1‑101 (MQ=255) cagcaACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCg < 1:11843161/101‑1 (MQ=255) cagcaACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCg > 1:13355350/1‑101 (MQ=255) agcaACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGt > 1:8566946/1‑101 (MQ=255) agcaACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGt > 1:6382632/1‑101 (MQ=255) caacaaCCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGttt > 1:3760326/1‑101 (MQ=255) caacaaCCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGttt < 1:4373215/101‑1 (MQ=255) aacaacCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGtttt > 1:6861791/1‑101 (MQ=255) aacaacCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGtttt < 1:13124464/101‑1 (MQ=255) caacCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCa < 1:12097017/101‑1 (MQ=255) aacCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAg > 1:2888698/1‑101 (MQ=255) ccAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGtt > 1:1524940/1‑101 (MQ=255) ccAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGtt > 1:27987/1‑101 (MQ=255) cAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGttt < 1:10540488/101‑1 (MQ=255) aGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGTTTc > 1:12792716/1‑101 (MQ=255) aCTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGGGATCATGCCGTTTTCAGTTTCAAc > 1:14933846/1‑101 (MQ=255) tACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGTTTCAACGt > 1:7637562/1‑101 (MQ=255) gATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGTTTCAACGTGGt > 1:11800551/1‑101 (MQ=255) aTGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGTTTCAACGTGGTa < 1:15168388/101‑1 (MQ=255) aTGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGTTTCAACGTGGTa < 1:4837913/101‑1 (MQ=255) tGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGTTTCAACGTGGTAt < 1:2393635/101‑1 (MQ=255) ccGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGTTTCAACGTGGTATGCa < 1:2312907/101‑1 (MQ=255) | AACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGCCGTTTTCAGTTTCAACGTGGTATGCA > NC_007779/3314385‑3314583 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |