| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,451,680 | G→T | 36.4% | L1253M (CTG→ATG) | rpoB ← | RNA polymerase subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,451,680 | 0 | G→T | 36.4% | 0.0 ‑0.1 ‑0.5 | 382 | L1253M (CTG→ATG) | rpoB | RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): new base (62/77): ref base (110/133): total (172/210) | ||||||||||
| Fisher's exact test strand distribution p-value = 9.15e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.97e-01 | ||||||||||
Only 100 of 385 total aligned reads displayed.
TGTATGCTGCGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTG > NC_007779/3451581‑3451779 | tgtATGCTGCGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAgg > 1:3701329/1‑101 (MQ=255)tgtATGCTGCGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAgg < 1:2446371/101‑1 (MQ=255) tgctgcGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGt < 1:829851/101‑1 (MQ=255) ctgcGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTaa > 1:3538480/1‑101 (MQ=255) tgcGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAg < 1:6264226/101‑1 (MQ=255) tgcGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAg > 1:10514965/1‑101 (MQ=255) gcCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAAc < 1:4305689/101‑1 (MQ=255) ccGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAAcc > 1:11973316/1‑101 (MQ=255) cGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCg < 1:1076364/101‑1 (MQ=255) gTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCgg > 1:5005012/1‑101 (MQ=255) gTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCgg < 1:14342013/101‑1 (MQ=255) gTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCgg > 1:13030895/1‑101 (MQ=255) tATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGt < 1:10127239/101‑1 (MQ=255) tATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGt < 1:13797972/101‑1 (MQ=255) aTGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTg > 1:4673756/1‑101 (MQ=255) aTGCTTCCAGCACCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTg > 1:3266031/1‑101 (MQ=255) gCTTCCAGCGCCCACACTTCCACCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGa > 1:3671989/1‑101 (MQ=255) cTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGaa < 1:2285654/101‑1 (MQ=255) cTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGaa < 1:7129157/101‑1 (MQ=255) ctCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAAc > 1:13425086/2‑101 (MQ=255) gcattgcCCACACCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAAcga > 1:3978099/6‑100 (MQ=255) ccAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAAcgc > 1:10718641/1‑101 (MQ=255) attgcCCACACCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAAcgagc < 1:5420797/98‑1 (MQ=255) ttgcCCACACCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAAcgagcg > 1:877652/3‑101 (MQ=255) ttgcCCACACCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAAcgagcg < 1:8836504/99‑1 (MQ=255) gcCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTg > 1:13676177/1‑101 (MQ=255) ccACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCa < 1:8974202/101‑1 (MQ=255) cacaCCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAAt > 1:5081795/1‑101 (MQ=255) cacTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCt < 1:11333998/101‑1 (MQ=255) cacCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCt > 1:9162964/1‑101 (MQ=255) cctCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCttc > 1:12119431/3‑100 (MQ=255) tCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTgtc > 1:840280/1‑101 (MQ=255) cATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTgtcgt > 1:6698479/1‑101 (MQ=255) tctcCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGtcgtcg > 1:14567297/1‑101 (MQ=255) tctcACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCtcgtcg < 1:14259231/101‑1 (MQ=255) ctcCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGa < 1:292462/101‑1 (MQ=255) accGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCa < 1:3754623/100‑1 (MQ=255) accGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCa < 1:10306984/100‑1 (MQ=255) ccGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAg > 1:4444285/1‑101 (MQ=255) ccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAg > 1:12306316/1‑101 (MQ=255) cGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAgg < 1:1899180/101‑1 (MQ=255) cGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAgg > 1:583178/1‑101 (MQ=255) gAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggt < 1:7679392/101‑1 (MQ=255) gAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggt < 1:14920628/101‑1 (MQ=255) aagcGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggtg < 1:2516382/98‑1 (MQ=255) agcGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggtgg > 1:1827591/3‑101 (MQ=255) agcGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggtgg < 1:6881147/99‑1 (MQ=255) aaCGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAggtgg < 1:7985588/101‑1 (MQ=255) cGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggtggtg < 1:11706369/101‑2 (MQ=255) cGCTGACCAACGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggtggtg < 1:1604871/101‑2 (MQ=255) gCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggtggtgc > 1:9310039/1‑99 (MQ=255) cTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCa < 1:1022497/101‑1 (MQ=255) tGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAg < 1:7368846/101‑1 (MQ=255) tGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAg > 1:3362655/1‑101 (MQ=255) tGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAg > 1:14739163/1‑101 (MQ=255) tGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAg > 1:11916599/1‑101 (MQ=255) accaccGAACTGAGCCTTACCACCCAGCGGCTGCTGGGGAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAgct > 1:11144337/1‑99 (MQ=255) ccaccGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGctt < 1:6443706/101‑1 (MQ=255) caccGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTc > 1:4873505/1‑101 (MQ=255) caccGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTc < 1:5668249/101‑1 (MQ=255) caccGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTc > 1:520775/1‑101 (MQ=255) caccGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTc < 1:6381281/101‑1 (MQ=255) cGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGc < 1:8533779/101‑1 (MQ=255) cGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGc < 1:7394985/101‑1 (MQ=255) gAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGca > 1:6329484/1‑101 (MQ=255) aaCTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcat < 1:14133201/101‑1 (MQ=255) aCTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatg > 1:6204967/1‑101 (MQ=255) tgtgCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGTTGGTTCAGTTTCAGcatgta > 1:13052361/1‑101 (MQ=255) agCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgtaca > 1:14854200/2‑101 (MQ=255) cTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgtacatgt > 1:1099812/1‑101 (MQ=255) ttACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgtacatgta < 1:9836264/101‑1 (MQ=255) tACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTaa > 1:13573798/1‑101 (MQ=255) tACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTaa < 1:15080073/101‑1 (MQ=255) tACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTaa < 1:7031146/101‑1 (MQ=255) accaccCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGTTGGTTCAGTTTCAGCATGTACATGTAAc < 1:11300008/101‑1 (MQ=255) ccaccCGGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAAcc > 1:14674934/1‑101 (MQ=255) ccaccCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGcc < 1:12248223/101‑1 (MQ=255) cccAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAAc < 1:4175333/101‑1 (MQ=255) cccAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAAc < 1:10837943/101‑1 (MQ=255) ccAGCGGCTGCTGGGTAATCATGGAGTACGGGCCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAcc > 1:8105707/1‑100 (MQ=255) ccAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACg > 1:1285489/1‑101 (MQ=255) aGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccga > 1:1265599/1‑98 (MQ=255) gggCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccgaaa < 1:15146871/100‑6 (MQ=255) cGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccgaaa < 1:2037528/101‑6 (MQ=255) cGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccgaaa < 1:1706622/101‑6 (MQ=255) ggCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccgaaac < 1:13196794/101‑7 (MQ=255) ggCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTAc > 1:11480398/1‑101 (MQ=255) ctgctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCg > 1:8681153/1‑101 (MQ=255) tgctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCgg < 1:9770445/101‑1 (MQ=255) tgctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCgg > 1:8427186/1‑101 (MQ=255) tgctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCgg < 1:8384535/101‑1 (MQ=255) gctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGa > 1:10458170/1‑101 (MQ=255) gctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGa > 1:3193716/1‑101 (MQ=255) ctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGAc < 1:9378192/101‑1 (MQ=255) tAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCg > 1:6495134/1‑101 (MQ=255) aaCCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGa < 1:12786146/101‑1 (MQ=255) aCCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGaa < 1:2726975/101‑1 (MQ=255) ccAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAAc < 1:9473918/101‑1 (MQ=255) ccAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAAc < 1:6045920/101‑1 (MQ=255) aGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTg < 1:721286/101‑1 (MQ=255) | TGTATGCTGCGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTG > NC_007779/3451581‑3451779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |