| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,460,498 | T→G | 9.2% | V80V (GTA→GTC) | tufB ← | protein chain elongation factor EF‑Tu |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,460,498 | 0 | T→G | 9.2% | 30.7 ‑2.2 ‑0.3 | 119 | V80V (GTA→GTC) | tufB | protein chain elongation factor EF‑Tu |
| Reads supporting (aligned to +/- strand): new base (8/3): ref base (47/61): total (55/64) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.10e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.64e-01 | ||||||||||
Only 100 of 123 total aligned reads displayed.
GCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGAT > NC_007779/3460398‑3460551 | gCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCt < 1:9782331/101‑1 (MQ=32)gCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCt > 1:11935011/1‑101 (MQ=32) cATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTa < 1:14168143/101‑1 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc > 1:9726927/1‑101 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc < 1:2760647/101‑1 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc < 1:4939983/101‑1 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc < 1:11181075/101‑1 (MQ=32) aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTAc < 1:7408519/101‑1 (MQ=32) tCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACg < 1:5574546/101‑1 (MQ=32) cGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgt < 1:4547809/101‑1 (MQ=32) gggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtg > 1:709368/1‑101 (MQ=32) gggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtg > 1:9452342/1‑101 (MQ=32) gggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtg < 1:4458700/101‑1 (MQ=32) gggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtg < 1:8720814/101‑1 (MQ=32) gggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtg > 1:9146049/1‑101 (MQ=32) ggaccGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACgtg > 1:10516710/4‑101 (MQ=2) ggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACgtgt > 1:7378539/1‑101 (MQ=33) gaccGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACgtga < 1:8278330/99‑2 (MQ=2) gCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGtgtg > 1:1999888/1‑101 (MQ=32) ccGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGc < 1:6289717/101‑1 (MQ=32) cGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCg < 1:7576507/101‑1 (MQ=32) gTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGC‑GTCGACGTGAGCGt < 1:12396657/101‑1 (MQ=2) gTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGt > 1:3416819/1‑101 (MQ=33) gTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGt < 1:1002508/101‑1 (MQ=32) tCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTa > 1:6028912/1‑101 (MQ=33) tCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTa < 1:1095505/101‑1 (MQ=32) tCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTa < 1:7465065/101‑1 (MQ=32) tCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTa > 1:8166933/1‑101 (MQ=33) tCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTa > 1:13555420/1‑101 (MQ=33) cAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAg < 1:4869758/101‑1 (MQ=32) aGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGt > 1:7508930/1‑101 (MQ=33) aGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGt < 1:9547179/101‑1 (MQ=32) aGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGt < 1:4595543/101‑1 (MQ=32) tCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGa < 1:9006840/101‑1 (MQ=32) cGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGAc > 1:2940039/1‑101 (MQ=33) gcagcaACTACCAGGATCGCGCCGTCCATCTGCCCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACg > 1:12134967/1‑101 (MQ=18) cagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACgg < 1:8262481/101‑1 (MQ=32) cagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACgg > 1:8954287/1‑101 (MQ=33) cagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACgg < 1:312345/101‑1 (MQ=32) cagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACgg < 1:9624881/101‑1 (MQ=32) agcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACggg > 1:3952775/1‑101 (MQ=32) agcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACggg < 1:4451550/101‑1 (MQ=32) gcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGt < 1:12614214/101‑1 (MQ=32) caACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTc < 1:3326360/101‑1 (MQ=32) caACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTc < 1:646976/101‑1 (MQ=32) caACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTc < 1:10818579/101‑1 (MQ=32) caACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTc < 1:10491363/101‑1 (MQ=32) aaCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCg > 1:4752498/1‑101 (MQ=32) aaCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCg > 1:14178635/1‑101 (MQ=33) aaCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCg < 1:13254248/101‑1 (MQ=32) aaCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGCTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGCAGTGACGGGTCg > 1:10742902/1‑101 (MQ=12) aCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCgg > 1:6556528/1‑101 (MQ=33) caaCCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGC‑AGCGTCGACGTGAGCGTAGTGCCgcttatcg > 1:5356198/3‑94 (MQ=2) tACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCGCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCgggg > 1:12444969/1‑101 (MQ=18) tACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCgggg > 1:10098362/1‑101 (MQ=33) tACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCgggg > 1:3297080/1‑101 (MQ=33) aCCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgt < 1:5356970/101‑1 (MQ=32) aCCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgt < 1:10064210/101‑1 (MQ=32) ccAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgtg < 1:6129679/101‑1 (MQ=32) ccAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgtg > 1:9375156/1‑101 (MQ=32) ccAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGgtg < 1:4505847/101‑1 (MQ=32) gATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGt > 1:12094182/1‑101 (MQ=33) aTCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTa < 1:5728651/101‑1 (MQ=32) aTCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTa > 1:14715523/1‑101 (MQ=33) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTCACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt < 1:10284559/101‑1 (MQ=17) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt < 1:4029439/101‑1 (MQ=32) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt < 1:10985353/101‑1 (MQ=32) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt > 1:5529430/1‑101 (MQ=33) tCGCGCCGGCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt < 1:13095632/101‑1 (MQ=17) gcgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTc < 1:14672223/101‑1 (MQ=32) gcgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTc > 1:14144528/1‑101 (MQ=33) cgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCa < 1:3791905/101‑1 (MQ=32) gcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaa > 1:322436/1‑101 (MQ=32) gcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaa < 1:13471466/101‑1 (MQ=32) ccGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaat > 1:14690479/1‑100 (MQ=17) ccGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAAc < 1:1415274/101‑1 (MQ=32) ccGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAAc > 1:884783/1‑101 (MQ=2) cGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACg < 1:10902745/101‑1 (MQ=32) cGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACg > 1:3323632/1‑101 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt > 1:11031331/1‑101 (MQ=32) tCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTg < 1:9705570/101‑1 (MQ=32) tCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTg > 1:8943140/1‑101 (MQ=32) ccATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTga < 1:6817914/101‑1 (MQ=32) cATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTgag > 1:12783733/1‑101 (MQ=32) cATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTgag > 1:11939090/1‑101 (MQ=32) tCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGaa < 1:2260285/101‑1 (MQ=32) tCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGaa > 1:7639029/1‑101 (MQ=32) cTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGCAg < 1:14063984/101‑1 (MQ=17) tGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgt > 1:8604365/1‑101 (MQ=32) tGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgt > 1:14419196/1‑101 (MQ=32) tGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgt > 1:7362059/1‑101 (MQ=32) tGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgt < 1:12826311/101‑1 (MQ=32) gcgcAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgtg > 1:11585188/1‑101 (MQ=31) gcgcAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgtg < 1:12850258/101‑1 (MQ=31) cgcAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgtgt < 1:10295510/101‑1 (MQ=11) cgcAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgtgt < 1:13266263/101‑1 (MQ=11) cgcAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgtgt < 1:11488975/101‑1 (MQ=11) cagcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTgcgagacgttg < 1:2080477/101‑8 (MQ=0) agcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTgcgagacgttga > 1:3025025/1‑93 (MQ=0) agcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGG‑AGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTgcgagacgttga > 1:3407004/1‑93 (MQ=0) | GCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGG‑GCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGAT > NC_007779/3460398‑3460551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |