| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,682,577 | T→C | 8.8% | E209E (GAA→GAG) | ilvD ← | dihydroxyacid dehydratase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,682,577 | 0 | T→C | 8.8% | 47.7 ‑0.4 ‑1.1 | 228 | E209E (GAA→GAG) | ilvD | dihydroxyacid dehydratase |
| Reads supporting (aligned to +/- strand): new base (12/8): ref base (109/99): total (121/107) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.41e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.70e-02 | ||||||||||
Only 100 of 234 total aligned reads displayed.
TCAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATA > NC_007779/3682477‑3682677 | cAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCtt > 1:13508762/1‑101 (MQ=255) aaTTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCGGTTGCCCGGCTGCGACAGGCCCAGCGCTTc > 1:9076144/1‑101 (MQ=255) aaTTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTc > 1:6927232/1‑101 (MQ=255) aaTTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTc > 1:1157257/1‑101 (MQ=255) aTTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCg < 1:8051921/101‑1 (MQ=255) ttCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCgg > 1:8525992/1‑101 (MQ=255) caacaaTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCTGGCTGCGACAGGCCCAGCGCTTCGGTc < 1:4779162/101‑1 (MQ=255) caacaaTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTc > 1:4741760/1‑101 (MQ=255) aacaaTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCa > 1:13452780/1‑101 (MQ=255) caaTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAgg > 1:12038583/1‑101 (MQ=255) aaTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGc < 1:14914268/101‑1 (MQ=255) aaTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGc < 1:7127904/101‑1 (MQ=255) tGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAg < 1:7536232/101‑1 (MQ=255) tGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAg > 1:55864/1‑101 (MQ=255) gCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGt > 1:11314732/1‑101 (MQ=255) gTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTc > 1:7016283/1‑101 (MQ=255) tttACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCa > 1:347748/1‑101 (MQ=255) ttACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCAt < 1:8301044/101‑1 (MQ=255) ttACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCAt < 1:568368/101‑1 (MQ=255) aCCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTg > 1:8380130/1‑101 (MQ=255) ccAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGa < 1:2422331/101‑1 (MQ=255) gCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGtt > 1:12929619/1‑101 (MQ=255) gCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGtt > 1:5303170/1‑101 (MQ=255) gCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGtt > 1:7351216/1‑101 (MQ=255) cATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTa < 1:4055731/101‑1 (MQ=255) aTTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAg > 1:6110636/1‑101 (MQ=255) aTTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAg < 1:6278032/101‑1 (MQ=255) tAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCg > 1:10185246/1‑101 (MQ=255) aaGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCgg > 1:13707339/1‑101 (MQ=255) aGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGt > 1:9254966/1‑101 (MQ=255) ggAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTa > 1:2652997/1‑101 (MQ=255) gAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTaa < 1:5118359/101‑1 (MQ=255) aGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACAt > 1:972813/1‑101 (MQ=255) aGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACAt < 1:5365308/101‑1 (MQ=255) aGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACAt > 1:11699955/1‑101 (MQ=255) gctgctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATc < 1:3198014/101‑1 (MQ=255) gctgctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATc > 1:10983297/1‑101 (MQ=255) gctgctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATc < 1:3964345/101‑1 (MQ=255) tgctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATccc > 1:4317321/1‑101 (MQ=255) gctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCg > 1:6031960/1‑101 (MQ=255) ctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCgg > 1:12525512/1‑101 (MQ=255) ttACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGa > 1:513097/1‑101 (MQ=255) ttACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGa < 1:12774791/101‑1 (MQ=255) ttACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGa < 1:11778247/101‑1 (MQ=255) tCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGa < 1:6331687/101‑1 (MQ=255) ggCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAAc > 1:6286908/1‑101 (MQ=255) ggCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAAc > 1:2787909/1‑101 (MQ=255) gCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAAcc < 1:9381274/101‑1 (MQ=255) tGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCa < 1:14788132/101‑1 (MQ=255) ggTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAgg < 1:10028038/101‑1 (MQ=255) ggTAGCGAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAgg < 1:821565/101‑1 (MQ=255) ttGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTc < 1:13525036/101‑1 (MQ=255) ttGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACAGCAGGTc < 1:10689851/101‑1 (MQ=255) cagcagCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGac < 1:9126006/101‑1 (MQ=255) gcagcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGacac > 1:4883970/1‑101 (MQ=255) gcagcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGacac < 1:3835022/101‑1 (MQ=255) gtagaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcgc > 1:10890140/10‑101 (MQ=255) agcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACAcgc < 1:11391288/101‑1 (MQ=255) agcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACAcgc > 1:3026209/1‑101 (MQ=255) tagaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcgcc < 1:6823083/93‑2 (MQ=255) cGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGTgg < 1:10355284/101‑1 (MQ=255) cGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCgg > 1:10100182/1‑101 (MQ=255) cGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCgg < 1:4187654/101‑1 (MQ=255) agaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcgccg > 1:10518149/8‑99 (MQ=255) gAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGa > 1:990140/1‑101 (MQ=255) gAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGa < 1:798083/101‑1 (MQ=255) aaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGag < 1:11518384/96‑2 (MQ=255) aGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGaa < 1:1720358/101‑1 (MQ=255) gCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAAc < 1:6058644/101‑1 (MQ=255) cattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCgc > 1:14689051/3‑100 (MQ=255) cGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGt > 1:13020104/1‑101 (MQ=255) gTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGtt > 1:458323/1‑101 (MQ=255) attGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCgct > 1:9515581/2‑99 (MQ=255) attGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCgct < 1:1233000/100‑3 (MQ=255) ttGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTc < 1:13919606/101‑1 (MQ=255) ttGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTc < 1:14174686/101‑1 (MQ=255) ttGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTc > 1:10041458/1‑101 (MQ=255) tGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCa > 1:6201512/1‑101 (MQ=255) tGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTcg < 1:5483990/101‑2 (MQ=255) gCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCaa < 1:8639144/101‑1 (MQ=255) gCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCaa < 1:257800/101‑1 (MQ=255) gCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTcga < 1:14425107/101‑3 (MQ=255) ccGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAAcc > 1:2120178/1‑101 (MQ=255) ccGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTcgatg > 1:7275949/1‑97 (MQ=255) ggCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTg > 1:14260375/1‑101 (MQ=255) ggCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTg > 1:3890206/1‑101 (MQ=255) cTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGAt > 1:5149008/1‑101 (MQ=255) cTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGAt < 1:14448864/101‑1 (MQ=255) gCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCg > 1:8763647/1‑101 (MQ=255) cGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGc > 1:12152889/1‑101 (MQ=255) cGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGc < 1:14859169/101‑1 (MQ=255) aCAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctc < 1:11928558/101‑1 (MQ=255) cAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctct < 1:2715211/101‑1 (MQ=255) cAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctct < 1:14107694/101‑1 (MQ=255) aGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTg < 1:636883/101‑1 (MQ=255) gCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTggg < 1:3711178/101‑1 (MQ=255) cAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGt < 1:6730665/101‑1 (MQ=255) cAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGt < 1:9436173/101‑1 (MQ=255) aGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTc < 1:15182347/101‑1 (MQ=255) gcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGa > 1:3122360/1‑101 (MQ=255) | TCAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATA > NC_007779/3682477‑3682677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |