| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,682,616 | G→C | 9.0% | S196S (TCC→TCG) | ilvD ← | dihydroxyacid dehydratase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,682,616 | 0 | G→C | 9.0% | 55.4 ‑1.0 ‑0.1 | 221 | S196S (TCC→TCG) | ilvD | dihydroxyacid dehydratase |
| Reads supporting (aligned to +/- strand): new base (12/8): ref base (98/103): total (110/111) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.59e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.17e-01 | ||||||||||
Only 100 of 231 total aligned reads displayed.
GCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGAT > NC_007779/3682516‑3682716 | gctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCg > 1:6416558/1‑101 (MQ=255) ctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCgg > 1:10775648/1‑101 (MQ=255) ctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCgg < 1:11138639/101‑1 (MQ=255) ctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCgg > 1:12142481/1‑101 (MQ=255) ttACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGa < 1:12774791/101‑1 (MQ=255) ttACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGa > 1:513097/1‑101 (MQ=255) ggTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAg < 1:6058663/101‑1 (MQ=255) ggCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAAc < 1:550677/101‑1 (MQ=255) ggCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAAc > 1:6286908/1‑101 (MQ=255) gTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGc > 1:5308069/1‑101 (MQ=255) tGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCa < 1:14788132/101‑1 (MQ=255) tGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCa > 1:5136694/1‑101 (MQ=255) tGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCa > 1:12884482/1‑101 (MQ=255) ttGCCAGCGGGGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTc < 1:13468678/101‑1 (MQ=255) ttGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTc < 1:13525036/101‑1 (MQ=255) tGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCg < 1:5605150/101‑1 (MQ=255) cagcagCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGac > 1:6329211/1‑101 (MQ=255) cagcagCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGac < 1:9126006/101‑1 (MQ=255) gcagcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGacac < 1:12868407/101‑1 (MQ=255) gcagcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGacac > 1:4883970/1‑101 (MQ=255) agcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACAcgc > 1:11897141/1‑101 (MQ=255) cGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCgg < 1:4187654/101‑1 (MQ=255) cGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCgg > 1:10100182/1‑101 (MQ=255) agaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcgccg > 1:10518149/8‑99 (MQ=255) gaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGa > 1:10960940/7‑101 (MQ=255) gAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGa < 1:798083/101‑1 (MQ=255) aaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGag < 1:11518384/96‑2 (MQ=255) aGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGaa < 1:1720358/101‑1 (MQ=255) gCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAAc < 1:12206305/101‑1 (MQ=255) accattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGagc > 1:7041265/5‑99 (MQ=255) gTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGtt > 1:1153597/1‑101 (MQ=255) gTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGtt < 1:14897514/101‑1 (MQ=255) attGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCgct > 1:6919432/2‑99 (MQ=255) attGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCgct < 1:1233000/100‑3 (MQ=255) attGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCgct > 1:9515581/2‑99 (MQ=255) ttGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTc < 1:13919606/101‑1 (MQ=255) ttGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTc > 1:10041458/1‑101 (MQ=255) tGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCa > 1:6201512/1‑101 (MQ=255) ccGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTcgatg > 1:3892994/1‑97 (MQ=255) ccGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTcgatg > 1:7275949/1‑97 (MQ=255) cGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCt < 1:116498/101‑1 (MQ=255) cGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCt < 1:3648282/101‑1 (MQ=255) aCAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctc < 1:5232020/101‑1 (MQ=255) cAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctct < 1:2715211/101‑1 (MQ=255) ggCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTgg < 1:6775934/101‑1 (MQ=255) cAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGt < 1:9436173/101‑1 (MQ=255) cgcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAg < 1:40344/101‑1 (MQ=255) cgcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAg < 1:47594/101‑1 (MQ=255) gcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGa > 1:3122360/1‑101 (MQ=255) cTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGAt < 1:9262247/101‑1 (MQ=255) cTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGAt > 1:814236/1‑101 (MQ=255) cGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACt < 1:14568223/101‑1 (MQ=255) ggTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACtt > 1:3754537/1‑101 (MQ=255) ggTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGACCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACtt > 1:14426782/1‑101 (MQ=255) gTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACttt < 1:13748816/101‑1 (MQ=255) tCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTc > 1:448407/1‑101 (MQ=255) cAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCg > 1:1854701/1‑101 (MQ=255) cAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCg > 1:3846632/1‑101 (MQ=255) cAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGATCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCg > 1:7478921/1‑101 (MQ=255) aGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCgg > 1:14200112/1‑101 (MQ=255) ggCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCggg < 1:2952204/101‑1 (MQ=255) cAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTc < 1:5416639/101‑1 (MQ=255) cAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTc < 1:2476127/101‑1 (MQ=255) aGTTCATTGAGTTAGCGGTAAACATCCCGGAGCGGGAACCTCAGGTCGGACACGCGGACCGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCt < 1:11722764/101‑1 (MQ=255) aGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCt > 1:3882453/1‑101 (MQ=255) aGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCt < 1:6468681/101‑1 (MQ=255) aGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCt < 1:2581033/101‑1 (MQ=255) ttCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgc > 1:8512709/1‑101 (MQ=255) ttCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgc < 1:2001077/101‑1 (MQ=255) tCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgcg > 1:6579651/1‑101 (MQ=255) aTTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGcc > 1:7549044/1‑101 (MQ=255) ttGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGccc > 1:5909543/1‑101 (MQ=255) tGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCt > 1:10536662/1‑101 (MQ=255) gAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTg > 1:10021568/1‑101 (MQ=255) gAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTg > 1:11468985/1‑101 (MQ=255) aGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTgg > 1:11358081/1‑101 (MQ=255) aGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTgg < 1:8854362/101‑1 (MQ=255) aGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTgg < 1:2386175/101‑1 (MQ=255) aGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTgg > 1:8596482/1‑101 (MQ=255) gTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGa > 1:10180837/1‑101 (MQ=255) ttAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGat < 1:8042864/101‑1 (MQ=255) ttAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGat < 1:5015960/101‑1 (MQ=255) aGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatca < 1:14373852/101‑1 (MQ=255) aGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatca > 1:8441088/1‑101 (MQ=255) gCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatcat > 1:9314087/1‑101 (MQ=255) cGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatcatc > 1:12484933/1‑101 (MQ=255) cGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatcatc < 1:3212914/101‑1 (MQ=255) ggTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCg > 1:3345130/1‑101 (MQ=255) gTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGc < 1:13120773/101‑1 (MQ=255) gTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGc > 1:4399509/1‑101 (MQ=255) gTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGc < 1:8755565/101‑1 (MQ=255) tAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCa > 1:4170818/1‑101 (MQ=255) aaaCATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCAt > 1:8923010/1‑101 (MQ=255) aCATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCa < 1:15120693/101‑1 (MQ=255) cATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCaa < 1:9685894/101‑1 (MQ=255) cccGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCa < 1:12534577/101‑1 (MQ=255) ccGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAg < 1:11632336/101‑1 (MQ=255) ccGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAg > 1:14113335/1‑101 (MQ=255) cGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGa < 1:11594096/101‑1 (MQ=255) cGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGa > 1:7406979/1‑101 (MQ=255) | GCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGAT > NC_007779/3682516‑3682716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |