Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,717,826 G→A 6.1% G335S (GGT→AGT)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,717,8260G→A 6.1% 32.3 ‑0.2 ‑0.0264G335S (GGT→AGT) atpAF1 sector of membrane‑bound ATP synthase subunit alpha
Reads supporting (aligned to +/- strand):  new base (8/8):  ref base (113/133):  total (121/143)
Fisher's exact test strand distribution p-value = 8.00e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.69e-01

Only 100 of 276 total aligned reads displayed.

TGCACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGT  >  NC_007779/3717726‑3717926
                                                                                                    |                                                                                                    
tgcACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCgg                                                                                                      >  1:14912947/1‑101 (MQ=255)
tgcACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCgg                                                                                                      <  1:2654763/101‑1 (MQ=255)
tgcACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCgg                                                                                                      <  1:3068905/101‑1 (MQ=255)
  cACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGTGt                                                                                                    <  1:10742338/101‑1 (MQ=255)
   aCGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTg                                                                                                   >  1:7598482/1‑101 (MQ=255)
   aCGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTg                                                                                                   <  1:3687955/101‑1 (MQ=255)
    cGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGa                                                                                                  <  1:7233223/101‑1 (MQ=255)
       gtTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGt                                                                                               <  1:5969283/101‑1 (MQ=255)
        ttAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGtt                                                                                              <  1:12936084/101‑1 (MQ=255)
          aaCGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTc                                                                                            <  1:1099428/101‑1 (MQ=255)
            cGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTg                                                                                          <  1:2923918/101‑1 (MQ=255)
            cGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTg                                                                                          >  1:6151531/1‑101 (MQ=255)
            cGCAGAATACGTTGAAGCCTTCAACAAAGGGGAAGTGAAAGGGAAAGCCGGTTCTCTGCCCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTg                                                                                          <  1:12674437/101‑1 (MQ=255)
             gCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGc                                                                                         <  1:10376919/101‑1 (MQ=255)
             gCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGc                                                                                         >  1:11987176/1‑101 (MQ=255)
              ccGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcg                                                                                        >  1:3581054/1‑101 (MQ=255)
               cGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgt                                                                                       >  1:14007318/1‑101 (MQ=255)
                 aaTACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttc                                                                                     <  1:11456632/101‑1 (MQ=255)
                    aCGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttcgtt                                                                                  <  1:4191139/101‑1 (MQ=255)
                     cGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCgttcgttc                                                                                 <  1:5435345/101‑1 (MQ=255)
                      gTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTcc                                                                                <  1:10034877/101‑1 (MQ=255)
                       ttGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGGGACGTTTCTGCGTTCGTTCCg                                                                               >  1:6710504/1‑101 (MQ=255)
                        tGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGa                                                                              >  1:2500250/1‑101 (MQ=255)
                        tGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGa                                                                              >  1:11586102/1‑101 (MQ=255)
                         gAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGAc                                                                             <  1:1277989/101‑1 (MQ=255)
                           aGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCa                                                                           >  1:10576353/1‑101 (MQ=255)
                            gCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCaa                                                                          <  1:7419482/101‑1 (MQ=255)
                             ccTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAAc                                                                         >  1:13164069/1‑101 (MQ=255)
                              cTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGATGTTTCTGCGTTCGTTCCGACCAACg                                                                        <  1:6315068/101‑1 (MQ=255)
                               ttCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGt                                                                       >  1:5238067/1‑101 (MQ=255)
                               ttCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGt                                                                       <  1:13324306/101‑1 (MQ=255)
                               ttCACCAAAGGGTAAGTTAAAGGGAAAACCCGCTCTCTGCCCGCACTGCCGATTATCGAAACTCAGGCGTGTGCCGTTTCTGCGTTCGTTCCGACCAACGt                                                                       <  1:10845397/101‑1 (MQ=255)
                                 cACCAAAGGTGAAGTGAAAGGGAAAACGGGTTCTCTGACCGCACTGCCGCTTATCGAAACTCAGGCGTGAGACGTTTCTGCGGTCGTTCCGACCCACGTaa                                                                     >  1:7909673/1‑101 (MQ=255)
                                 cACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTaa                                                                     <  1:1177770/101‑1 (MQ=255)
                                  aCCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAt                                                                    >  1:9300041/1‑101 (MQ=255)
                                     aaaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAtctc                                                                 >  1:4009091/1‑101 (MQ=255)
                                       aGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCa                                                               >  1:14197007/1‑101 (MQ=255)
                                       aGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCa                                                               >  1:1806070/1‑101 (MQ=255)
                                          tgaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTa                                                            >  1:9359750/1‑101 (MQ=255)
                                          tgaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTa                                                            <  1:1829147/101‑1 (MQ=255)
                                          tgaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTa                                                            >  1:3200869/1‑101 (MQ=255)
                                           gaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTAc                                                           <  1:9732575/101‑1 (MQ=255)
                                            aagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTAcc                                                          <  1:1467658/101‑1 (MQ=255)
                                            aagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTAcc                                                          <  1:4635187/101‑1 (MQ=255)
                                              gtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGa                                                        >  1:12267084/1‑101 (MQ=255)
                                               tgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGAt                                                       <  1:878140/101‑1 (MQ=255)
                                               tgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGAt                                                       >  1:10462063/1‑101 (MQ=255)
                                                gaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATg                                                      >  1:11874668/1‑101 (MQ=255)
                                                gaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATg                                                      <  1:5018214/101‑1 (MQ=255)
                                                  aaGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGt                                                    >  1:14380341/1‑101 (MQ=255)
                                                  aaGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGt                                                    <  1:13383544/101‑1 (MQ=255)
                                                      gAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGa                                                <  1:8582460/101‑1 (MQ=255)
                                                      gAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGa                                                <  1:13904930/101‑1 (MQ=255)
                                                        aaaCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATc                                              >  1:13696507/1‑101 (MQ=255)
                                                         aaCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCt                                             <  1:8012688/101‑1 (MQ=255)
                                                          aCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCtt                                            >  1:14990509/1‑101 (MQ=255)
                                                           ccGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTc                                           >  1:4836717/1‑101 (MQ=255)
                                                            aggctcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTcc                                          <  1:8359841/94‑1 (MQ=255)
                                                             ggTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCt                                         <  1:1109458/101‑1 (MQ=255)
                                                              gTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTg                                        <  1:11191422/101‑1 (MQ=255)
                                                              gTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTg                                        >  1:5524250/1‑101 (MQ=255)
                                                               ttCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTgg                                       <  1:4394002/101‑1 (MQ=255)
                                                                 ctctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaa                                     >  1:7783867/1‑101 (MQ=255)
                                                                 cgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGag                                     <  1:11360568/99‑2 (MQ=255)
                                                                  tctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaaa                                    <  1:12455590/101‑1 (MQ=255)
                                                                   ctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaac                                   >  1:9431287/1‑101 (MQ=255)
                                                                    tGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaacc                                  >  1:15092475/1‑101 (MQ=255)
                                                                    tGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGagtcc                                  >  1:6820369/1‑97 (MQ=255)
                                                                    tGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGagtcc                                  >  1:10335571/1‑97 (MQ=255)
                                                                     gACCGCACTGCCGATTATCGAAACGCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaacca                                 <  1:3968657/101‑1 (MQ=255)
                                                                      aCCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaa                                <  1:8086648/101‑1 (MQ=255)
                                                                       ccGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaac                               <  1:5410636/101‑1 (MQ=255)
                                                                        cGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaacc                              >  1:10156332/1‑101 (MQ=255)
                                                                         gCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCt                             <  1:5593185/101‑1 (MQ=255)
                                                                         gCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCt                             <  1:6906056/101‑1 (MQ=255)
                                                                         gCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCt                             >  1:5350375/1‑101 (MQ=255)
                                                                         gCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCt                             >  1:1010121/1‑101 (MQ=255)
                                                                          cACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTg                            >  1:15202048/1‑101 (MQ=255)
                                                                           aCTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGt                           >  1:14865124/1‑101 (MQ=255)
                                                                              gCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCa                        <  1:904639/101‑1 (MQ=255)
                                                                               ccGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCaa                       <  1:6013343/101‑1 (MQ=255)
                                                                                    tATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCg                  <  1:7275757/101‑1 (MQ=255)
                                                                                     aTCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCgg                 <  1:12632599/101‑1 (MQ=255)
                                                                                      tCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGt                >  1:3305947/1‑101 (MQ=255)
                                                                                       cGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTa               >  1:984258/1‑101 (MQ=255)
                                                                                         aaaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAtt             <  1:646920/101‑1 (MQ=255)
                                                                                         aaaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAtt             <  1:5671975/101‑1 (MQ=255)
                                                                                         aaaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAtt             <  1:9171255/101‑1 (MQ=255)
                                                                                         aaaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGCTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAtt             >  1:3775028/1‑101 (MQ=255)
                                                                                          aaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTc            <  1:8697363/101‑1 (MQ=255)
                                                                                           aCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCg           <  1:106575/101‑1 (MQ=255)
                                                                                             tCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTc         >  1:1259490/1‑101 (MQ=255)
                                                                                               aGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCt       <  1:831673/101‑1 (MQ=255)
                                                                                               aGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCt       <  1:7052630/101‑1 (MQ=255)
                                                                                                ggCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTg      <  1:1351591/101‑1 (MQ=255)
                                                                                                 gCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGc     <  1:8437835/101‑1 (MQ=255)
                                                                                                  cGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCg    <  1:2092659/101‑1 (MQ=255)
                                                                                                   gggTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCgg   >  1:4276893/1‑101 (MQ=255)
                                                                                                   gggTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCgg   <  1:4744438/101‑1 (MQ=255)
                                                                                                    ggTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGt  <  1:1889552/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
TGCACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGT  >  NC_007779/3717726‑3717926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.