Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,717,827 G→A 6.1% G335D (GGT→GAT)  atpA → F1 sector of membrane‑bound ATP synthase subunit alpha

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,717,8270G→A 6.1% 32.4 ‑0.2 ‑0.4263G335D (GGT→GAT) atpAF1 sector of membrane‑bound ATP synthase subunit alpha
Reads supporting (aligned to +/- strand):  new base (8/8):  ref base (112/135):  total (120/143)
Fisher's exact test strand distribution p-value = 7.98e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.92e-01

Only 100 of 278 total aligned reads displayed.

GCACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTT  >  NC_007779/3717727‑3717927
                                                                                                    |                                                                                                    
gcACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAGGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCggg                                                                                                      >  1:2691266/1‑101 (MQ=255)
 cACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGTGt                                                                                                     <  1:10742338/101‑1 (MQ=255)
  aCGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTg                                                                                                    >  1:7598482/1‑101 (MQ=255)
   cGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGa                                                                                                   <  1:7233223/101‑1 (MQ=255)
    gtgtTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGAc                                                                                                  <  1:5305817/101‑1 (MQ=255)
    gtgtTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGAc                                                                                                  <  1:3688290/101‑1 (MQ=255)
    gtgtTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGAc                                                                                                  >  1:3007311/1‑101 (MQ=255)
     tgtTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACg                                                                                                 <  1:6014316/101‑1 (MQ=255)
      gtTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGt                                                                                                <  1:5969283/101‑1 (MQ=255)
      gtTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGt                                                                                                <  1:3511435/101‑1 (MQ=255)
          aCGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCt                                                                                            <  1:8676746/101‑1 (MQ=255)
           cGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTg                                                                                           <  1:12699779/101‑1 (MQ=255)
            gCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGc                                                                                          >  1:11987176/1‑101 (MQ=255)
            gCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGc                                                                                          <  1:10376919/101‑1 (MQ=255)
             ccGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcg                                                                                         <  1:5653646/101‑1 (MQ=255)
              cGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgt                                                                                        <  1:3981093/101‑1 (MQ=255)
                   aCGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttcgtt                                                                                   <  1:14811157/101‑1 (MQ=255)
                    cGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCgttcgttc                                                                                  <  1:13352834/101‑1 (MQ=255)
                     gTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTcc                                                                                 <  1:10034877/101‑1 (MQ=255)
                     gTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTcc                                                                                 <  1:11082065/101‑1 (MQ=255)
                      ttGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCg                                                                                >  1:5206620/1‑101 (MQ=255)
                      ttGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGGGACGTTTCTGCGTTCGTTCCg                                                                                >  1:6710504/1‑101 (MQ=255)
                       tGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGa                                                                               >  1:2500250/1‑101 (MQ=255)
                          aGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCa                                                                            <  1:3193952/101‑1 (MQ=255)
                          aGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCa                                                                            >  1:10576353/1‑101 (MQ=255)
                           gCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCaa                                                                           <  1:11132105/101‑1 (MQ=255)
                            ccTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAAc                                                                          >  1:13164069/1‑101 (MQ=255)
                            ccTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAAc                                                                          <  1:473317/101‑1 (MQ=255)
                              ttCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGt                                                                        <  1:13324306/101‑1 (MQ=255)
                               tCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTa                                                                       >  1:12017457/1‑101 (MQ=255)
                                cACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTaa                                                                      >  1:6455338/1‑101 (MQ=255)
                                cACCAAAGGTGAAGTGAAAGGGAAAACCGGCTCTCTGACAGCACTGCCGATTATCGAAACTCAGGCCGGCGACGTCTCTCCGTTCGTTCCGCCCAACGTac                                                                      >  1:6154555/1‑100 (MQ=255)
                                 aCCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAt                                                                     >  1:9300041/1‑101 (MQ=255)
                                  ccAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAtc                                                                    <  1:4226968/101‑1 (MQ=255)
                                   cAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAtct                                                                   <  1:5426227/101‑1 (MQ=255)
                                     aaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTcc                                                                 <  1:14208839/101‑1 (MQ=255)
                                         tgaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTa                                                             <  1:1829147/101‑1 (MQ=255)
                                         tgaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTa                                                             >  1:9359750/1‑101 (MQ=255)
                                          gaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTAc                                                            <  1:9732575/101‑1 (MQ=255)
                                            agtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCg                                                          <  1:4609664/101‑1 (MQ=255)
                                              tgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGAt                                                        >  1:10462063/1‑101 (MQ=255)
                                              tgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGAt                                                        <  1:878140/101‑1 (MQ=255)
                                               gaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATg                                                       >  1:11874668/1‑101 (MQ=255)
                                                  aGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTc                                                    <  1:7345799/101‑1 (MQ=255)
                                                  aGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTc                                                    >  1:1267138/1‑101 (MQ=255)
                                                  aGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTc                                                    >  1:5560556/1‑101 (MQ=255)
                                                   gggAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCa                                                   >  1:4847689/1‑101 (MQ=255)
                                                   gggAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCa                                                   <  1:8045667/101‑1 (MQ=255)
                                                     gAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGa                                                 <  1:8582460/101‑1 (MQ=255)
                                                      aaaaCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGAt                                                <  1:4285557/101‑1 (MQ=255)
                                                       aaaCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATc                                               >  1:13696507/1‑101 (MQ=255)
                                                         aCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCtt                                             >  1:14990509/1‑101 (MQ=255)
                                                           cGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCAACCAACGTAATCTCCATTACCGATGGTCAGATCTTcc                                           >  1:4767306/1‑101 (MQ=255)
                                                            ggTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCt                                          >  1:7464685/1‑101 (MQ=255)
                                                             gTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTg                                         >  1:5486674/1‑101 (MQ=255)
                                                               tctcTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGa                                       >  1:3236535/1‑101 (MQ=255)
                                                               tctcTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGa                                       >  1:14479888/1‑101 (MQ=255)
                                                               tcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGa                                       <  1:8209228/98‑1 (MQ=255)
                                                               tcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGa                                       >  1:11414619/4‑101 (MQ=255)
                                                                ctctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaa                                      >  1:7783867/1‑101 (MQ=255)
                                                                cgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGag                                      >  1:3595379/3‑100 (MQ=255)
                                                                cgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGag                                      <  1:11360568/99‑2 (MQ=255)
                                                                cgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGag                                      <  1:13483566/99‑2 (MQ=255)
                                                                 tctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaaa                                     >  1:68405/1‑101 (MQ=255)
                                                                  ctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaac                                    >  1:9431287/1‑101 (MQ=255)
                                                                   tGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaacc                                   >  1:7914267/1‑101 (MQ=255)
                                                                   tGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaacc                                   >  1:15092475/1‑101 (MQ=255)
                                                                   tGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGagtcc                                   >  1:10335571/1‑97 (MQ=255)
                                                                      ccGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaac                                >  1:14878130/1‑101 (MQ=255)
                                                                      ccGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaac                                <  1:11555408/101‑1 (MQ=255)
                                                                       cGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaacc                               >  1:10156332/1‑101 (MQ=255)
                                                                        gCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCt                              >  1:1010121/1‑101 (MQ=255)
                                                                         cACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTg                             >  1:15202048/1‑101 (MQ=255)
                                                                         cACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTg                             >  1:6985066/1‑101 (MQ=255)
                                                                          aCTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGt                            >  1:5351886/1‑101 (MQ=255)
                                                                             gCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCa                         <  1:904639/101‑1 (MQ=255)
                                                                                gATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACg                      <  1:1685569/101‑1 (MQ=255)
                                                                                 aTTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGc                     >  1:8413233/1‑101 (MQ=255)
                                                                                  ttATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGcc                    >  1:10994020/1‑101 (MQ=255)
                                                                                  ttATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTAACGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGcc                    >  1:12882805/1‑101 (MQ=255)
                                                                                    aTCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCgg                  <  1:12632599/101‑1 (MQ=255)
                                                                                    aTCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCgg                  >  1:3905698/1‑101 (MQ=255)
                                                                                      cGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTa                >  1:984258/1‑101 (MQ=255)
                                                                                        aaaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAtt              <  1:9171255/101‑1 (MQ=255)
                                                                                         aaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTc             >  1:5691748/1‑101 (MQ=255)
                                                                                         aaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTc             >  1:13968431/1‑101 (MQ=255)
                                                                                          aCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCg            <  1:106575/101‑1 (MQ=255)
                                                                                            tCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTc          >  1:1259490/1‑101 (MQ=255)
                                                                                              aGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCt        <  1:831673/101‑1 (MQ=255)
                                                                                              aGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCt        <  1:7052630/101‑1 (MQ=255)
                                                                                              aGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCt        >  1:11698670/1‑101 (MQ=255)
                                                                                               ggCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTg       <  1:14056625/101‑1 (MQ=255)
                                                                                               ggCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGCAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTg       <  1:12446401/101‑1 (MQ=255)
                                                                                                 cGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCg     <  1:2092659/101‑1 (MQ=255)
                                                                                                   ggTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGt   <  1:1889552/101‑1 (MQ=255)
                                                                                                    gTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGtt  >  1:4053724/1‑101 (MQ=255)
                                                                                                    gTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGtt  <  1:10877913/101‑1 (MQ=255)
                                                                                                    gTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGtt  <  1:8514402/101‑1 (MQ=255)
                                                                                                    gTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGtt  <  1:13805762/101‑1 (MQ=255)
                                                                                                    gTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGtt  <  1:6269403/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
GCACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTT  >  NC_007779/3717727‑3717927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.