Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_007779 | 3,717,837 | T→G | 5.9% | S338S (TCT→TCG) | atpA → | F1 sector of membrane‑bound ATP synthase subunit alpha |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_007779 | 3,717,837 | 0 | T→G | 5.9% | 44.9 ‑0.2 ‑1.1 | 269 | S338S (TCT→TCG) | atpA | F1 sector of membrane‑bound ATP synthase subunit alpha |
Reads supporting (aligned to +/- strand): new base (8/8): ref base (116/137): total (124/145) | ||||||||||
Fisher's exact test strand distribution p-value = 8.00e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.20e-02 |
Only 100 of 275 total aligned reads displayed.
ACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTAACCCGGGTA > NC_007779/3717737‑3717937 | cGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTg < 1:4249039/101‑1 (MQ=255) ccGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcg > 1:14931304/1‑101 (MQ=255) ccGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcg > 1:3581054/1‑101 (MQ=255) aaTACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttc < 1:8767750/101‑1 (MQ=255) aaTACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttc < 1:10942660/101‑1 (MQ=255) tACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGcgttcgt > 1:6333813/1‑101 (MQ=255) gTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTcc < 1:11905920/101‑1 (MQ=255) gTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTcc < 1:11082065/101‑1 (MQ=255) gTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTcc < 1:10034877/101‑1 (MQ=255) tGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGa > 1:2500250/1‑101 (MQ=255) aaGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGAcc < 1:5430522/101‑1 (MQ=255) aGCCTTCACCAAAGGTGAAGTGAAAGGGAAACCCGTTTCTCGGCCCGACCTG‑CGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCaa < 1:6484524/101‑1 (MQ=255) gCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCaa < 1:7419482/101‑1 (MQ=255) gCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCaa < 1:11132105/101‑1 (MQ=255) gCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCaa > 1:3706036/1‑101 (MQ=255) ccTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAAc < 1:473317/101‑1 (MQ=255) ccTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAAc > 1:13164069/1‑101 (MQ=255) cTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACg < 1:6007794/101‑1 (MQ=255) ttCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGt > 1:5238067/1‑101 (MQ=255) ttCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGt < 1:13324306/101‑1 (MQ=255) ttCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGt < 1:15141628/101‑1 (MQ=255) ttCACCAAAGGGTAAGTTAAAGGGAAAACCCGCTCTCTGCCCGCACTGCCGATTATCGAAACTCAGGCGTGTGCCGTTTCTGCGTTCGTTCCGACCAACGt < 1:10845397/101‑1 (MQ=255) tCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTa > 1:12017457/1‑101 (MQ=255) tCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTa < 1:794312/101‑1 (MQ=255) cACCAAAGGTGAAGTGAAAGGGAAAACCGGCTCTCTGACAGCACTGCCGATTATCGAAACTCAGGCCGGCGACGTCTCTCCGTTCGTTCCGCCCAACGTac > 1:6154555/1‑100 (MQ=255) aCCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAt > 1:8317430/1‑101 (MQ=255) aaaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAtctc > 1:4009091/1‑101 (MQ=255) aaaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAAtctc > 1:4346789/1‑101 (MQ=255) aaGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTcc < 1:2902697/101‑1 (MQ=255) aGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCa > 1:1806070/1‑101 (MQ=255) tgaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTa > 1:9467474/1‑101 (MQ=255) tgaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTa < 1:10717355/101‑1 (MQ=255) gaagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTAc < 1:9732575/101‑1 (MQ=255) aagtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTAcc < 1:4635187/101‑1 (MQ=255) agtgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCg < 1:10476051/101‑1 (MQ=255) tgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGAt > 1:15072408/1‑101 (MQ=255) tgaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGAt > 1:3911415/1‑101 (MQ=255) gaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATg > 1:9070153/1‑101 (MQ=255) gaaAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATg > 1:11874668/1‑101 (MQ=255) aaGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGt < 1:13383544/101‑1 (MQ=255) aGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTc < 1:7345799/101‑1 (MQ=255) aGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTc > 1:5560556/1‑101 (MQ=255) gggAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCa < 1:8045667/101‑1 (MQ=255) aaaCCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATc < 1:13723289/101‑1 (MQ=255) aggctcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTcc < 1:4897243/94‑1 (MQ=255) ggTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCt > 1:14678489/1‑101 (MQ=255) ggTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCt > 1:10349253/1‑101 (MQ=255) gTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTg < 1:8532638/101‑1 (MQ=255) gTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTg > 1:5524250/1‑101 (MQ=255) ttCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTgg < 1:7246040/101‑1 (MQ=255) tctcTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGa > 1:14479888/1‑101 (MQ=255) tcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGa < 1:8209228/98‑1 (MQ=255) tcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGa < 1:7839733/98‑1 (MQ=255) tcgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGa > 1:11414619/4‑101 (MQ=255) ctctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaa < 1:12657532/101‑1 (MQ=255) ctctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaa < 1:48085/101‑1 (MQ=255) cgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGag < 1:13483566/99‑2 (MQ=255) cgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGag < 1:11360568/99‑2 (MQ=255) cgctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGag < 1:10397929/99‑2 (MQ=255) tctGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGaaa < 1:12455590/101‑1 (MQ=255) ctGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGagtc < 1:13597839/101‑4 (MQ=255) tGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaacc > 1:14172977/1‑101 (MQ=255) tGACCGCACTGCCGATCATCGAGACCAAGGCAAACGACGTGTCGGCCTTCATTCCGACCAACGTCATTTCCATTACCGACGGCCAGGTCTTCCTCGagtcc > 1:6820369/1‑97 (MQ=255) gACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaacca > 1:9201446/1‑101 (MQ=255) ccGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaac < 1:11555408/101‑1 (MQ=255) cGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaacc > 1:4142706/1‑101 (MQ=255) cGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAaaccaacc > 1:10156332/1‑101 (MQ=255) gCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCt > 1:5350375/1‑101 (MQ=255) gCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCt < 1:6906056/101‑1 (MQ=255) gCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCt > 1:1010121/1‑101 (MQ=255) aCTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGt > 1:14865124/1‑101 (MQ=255) tGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTc > 1:9427536/1‑101 (MQ=255) gCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCa > 1:8990671/1‑101 (MQ=255) ttATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTAACGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGcc > 1:12882805/1‑101 (MQ=255) tCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGt > 1:3305947/1‑101 (MQ=255) tCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGt < 1:12674617/101‑1 (MQ=255) cGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTa > 1:984258/1‑101 (MQ=255) gAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAt > 1:10594677/1‑101 (MQ=255) gAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAt < 1:8589820/101‑1 (MQ=255) aaaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAtt < 1:5671975/101‑1 (MQ=255) aaaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTAtt > 1:7625175/1‑101 (MQ=255) aaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTc < 1:9303517/101‑1 (MQ=255) aaCTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTc > 1:13968431/1‑101 (MQ=255) aGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCt < 1:7052630/101‑1 (MQ=255) aGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCt > 1:11698670/1‑101 (MQ=255) aGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCt < 1:12602902/101‑1 (MQ=255) gCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGc < 1:8437835/101‑1 (MQ=255) cGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCg < 1:2092659/101‑1 (MQ=255) ggTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGt < 1:1889552/101‑1 (MQ=255) ggTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGt < 1:3097121/101‑1 (MQ=255) gTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGtt < 1:13805762/101‑1 (MQ=255) gTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGtt < 1:3234685/101‑1 (MQ=255) tGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTa < 1:1521799/101‑1 (MQ=255) tGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTa < 1:14005185/101‑1 (MQ=255) tGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTa < 1:6223342/101‑1 (MQ=255) gACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTaa > 1:14332075/1‑101 (MQ=255) gACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTaa < 1:12374917/101‑1 (MQ=255) aCGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTAAc < 1:2355837/101‑1 (MQ=255) tttCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTAACCCg > 1:5382748/1‑101 (MQ=255) tGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTAACCCGGGTa > 1:1832001/1‑101 (MQ=255) | ACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTAACCCGGGTA > NC_007779/3717737‑3717937 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |