| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,168,131 | A→C | 4.3% | E410D (GAA→GAC) | fusA → | protein chain elongation factor EF‑G |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,168,131 | 0 | A→C | 4.3% | 24.5 ‑0.6 ‑0.0 | 233 | E410D (GAA→GAC) | fusA | protein chain elongation factor EF‑G |
| Reads supporting (aligned to +/- strand): new base (6/4): ref base (109/114): total (115/118) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.35e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.56e-01 | ||||||||||
Only 100 of 245 total aligned reads displayed.
TTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGT > NC_007779/4168031‑4168231 | ttCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGaa > 1:3323921/1‑101 (MQ=255) tCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAAt < 1:7992918/101‑1 (MQ=255) gcgGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTccc < 1:8754172/101‑1 (MQ=255) gcgGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTccc > 1:429534/1‑101 (MQ=255) cgGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCt < 1:10076462/101‑1 (MQ=255) gggCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTg < 1:1962309/101‑1 (MQ=255) ggCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGa < 1:135566/101‑1 (MQ=255) aCATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCg > 1:13423587/1‑101 (MQ=255) cATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCgg > 1:9739768/1‑101 (MQ=255) tCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTa > 1:11145393/1‑101 (MQ=255) tCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGAGAGACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTa < 1:10613197/101‑1 (MQ=255) gctgctgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAAt > 1:3042042/1‑101 (MQ=255) gctgctgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAAt > 1:7514767/1‑101 (MQ=255) tgctgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAAtct < 1:14825794/101‑1 (MQ=255) tgctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCa > 1:12160676/1‑101 (MQ=255) cttcattggTCTGAAGGACACCACCACTGGTGACACCCTGTGTGCACAGGATGCTCCAATCGTTCTGGAGTCCATGTCCTTCCCGGATCCGGTTATCTccg > 1:4531154/8‑100 (MQ=255) cttcattggTCTGAAGGACACCACCACTGGTGACACCCTGTGTGCACAGGATGCTCCAATCGTTCTGGAGTCCATGTCCTTCCCGGATCCGGTTATCTccg > 1:9803198/8‑100 (MQ=255) gctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCAt < 1:5635288/101‑1 (MQ=255) ctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATc < 1:1532415/101‑1 (MQ=255) ctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATc < 1:5104365/101‑1 (MQ=255) ctATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGAGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATc < 1:10283272/101‑1 (MQ=255) tATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCg < 1:8291438/101‑1 (MQ=255) tATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCg < 1:7110773/101‑1 (MQ=255) aTCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGc > 1:11955994/1‑101 (MQ=255) cGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAg > 1:4891435/1‑101 (MQ=255) gTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGtt < 1:5128037/101‑1 (MQ=255) tCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTg < 1:3885779/101‑1 (MQ=255) gAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAAc > 1:13170416/1‑101 (MQ=255) aaGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTCTGGAATTCCCTGAGCCGGTAATCTCCACCGCAGTTGAAcca > 1:12318073/1‑100 (MQ=255) aaGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCg < 1:4650545/101‑1 (MQ=255) aGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATTTCCATCGCAGTTGAACCGa < 1:6378283/101‑1 (MQ=255) aGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGa > 1:2976988/1‑101 (MQ=255) aGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGa < 1:4791988/101‑1 (MQ=255) acaccaCCACTGGTGACACCCTGTGTGCACAGGATGCTCCAATCGTTCTGGAGTCCATGTCCTTCCCGGATCCGGTTATCTCCGTTGCTATTGAGCCGaag < 1:1332032/96‑2 (MQ=255) gTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAAc < 1:13076398/101‑1 (MQ=255) gTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAAc < 1:317429/101‑1 (MQ=255) tAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAAcc < 1:9155244/101‑1 (MQ=255) tAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAAcc > 1:3806264/1‑101 (MQ=255) aaCCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCa > 1:8938174/1‑101 (MQ=255) aaCCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCa > 1:9544954/1‑101 (MQ=255) aCCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCaa < 1:10464644/101‑1 (MQ=255) ccACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCaaa < 1:1813485/101‑1 (MQ=255) aCTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGc > 1:2376538/1‑101 (MQ=255) aCTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGc < 1:7606780/101‑1 (MQ=255) cTGGTGACACCCTGTGTGCACAGGATGCTCCAATCGTTCTGGAGTCCATGTCCTTCCCGGATCCGGTTATCTCCGTTGCTATTGAGCCGAAGTCCAAGGCt < 1:7756712/101‑1 (MQ=255) tGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTg < 1:10547698/101‑1 (MQ=255) tGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGAcc > 1:12754588/1‑101 (MQ=255) tGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGAcc < 1:9111514/101‑1 (MQ=255) acCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGa > 1:3540303/1‑101 (MQ=255) cccTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaa < 1:10778641/101‑1 (MQ=255) cccTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaa < 1:403414/101‑1 (MQ=255) ccTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaaa < 1:3028168/101‑1 (MQ=255) cTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaaaa < 1:2207285/101‑1 (MQ=255) tgtgtgACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGaaaaa > 1:11515230/1‑101 (MQ=255) tgtgACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAAt > 1:6141002/1‑101 (MQ=255) tgtgACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAAt < 1:8479257/101‑1 (MQ=255) tgtgACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAAt > 1:3968853/1‑101 (MQ=255) tgACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGTAAAAATgg > 1:14146886/1‑101 (MQ=255) tgACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATgg < 1:10485292/101‑1 (MQ=255) ggATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTgg > 1:1399649/1‑101 (MQ=255) ggATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTgg > 1:8363642/1‑101 (MQ=255) ggATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCCCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTgg < 1:7049038/101‑1 (MQ=255) aTGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGct > 1:672517/1‑101 (MQ=255) cgcCGATTATTCTGGAACGTATGGAATTCCCTGAGCCCGTAATCTCCATTGCAGTTAAACTGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTg < 1:3853532/101‑1 (MQ=255) cgcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTg > 1:3647464/1‑101 (MQ=255) cgcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTg < 1:8449773/101‑1 (MQ=255) gcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTgg < 1:10019425/101‑1 (MQ=255) gcCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTCAACCGAAATCCAAAGCTGCCCAGGAAAAAATGGGTCTGGCTCTgg < 1:1362805/101‑1 (MQ=255) ccGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTggg > 1:5805570/1‑101 (MQ=255) ccGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTggg < 1:6003024/101‑1 (MQ=255) gATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGcc < 1:8122935/101‑1 (MQ=255) gATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGcc < 1:3207678/101‑1 (MQ=255) tCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGCCCgc > 1:14396494/1‑100 (MQ=255) cATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTc > 1:12698483/1‑101 (MQ=255) aTTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCt > 1:11374627/1‑101 (MQ=255) ttCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTg > 1:9524563/1‑101 (MQ=255) ttCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTg < 1:12832410/101‑1 (MQ=255) tCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTgg < 1:1070492/101‑1 (MQ=255) cTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGc > 1:11710522/1‑101 (MQ=255) tGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCt > 1:898448/1‑101 (MQ=255) tGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCt > 1:7400196/1‑101 (MQ=255) ggAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTa < 1:8628530/101‑1 (MQ=255) gAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTaa > 1:13737232/1‑101 (MQ=255) aaCGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTaaa > 1:6622160/1‑101 (MQ=255) aaCGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTaaa < 1:6272127/101‑1 (MQ=255) cGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAaaga < 1:12250392/101‑1 (MQ=255) cGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAaaga < 1:13269092/101‑1 (MQ=255) cGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAaaga > 1:4578917/1‑101 (MQ=255) gTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAaagaa > 1:12054623/1‑101 (MQ=255) aTGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAagaaga < 1:7952031/101‑1 (MQ=255) tGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACTAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGAc > 1:12670567/1‑101 (MQ=255) tGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGAc > 1:14971744/1‑101 (MQ=255) tGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGAc > 1:2431399/1‑101 (MQ=255) tGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGAc > 1:2671069/1‑101 (MQ=255) ggAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGAcc > 1:8699123/1‑101 (MQ=255) ggAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGAcc > 1:11031355/1‑101 (MQ=255) gAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGAccc < 1:5348372/101‑1 (MQ=255) aTTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGt < 1:13011863/101‑1 (MQ=255) aTTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGt < 1:13099304/101‑1 (MQ=255) aTTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGt > 1:1389686/1‑101 (MQ=255) | TTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGT > NC_007779/4168031‑4168231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |