| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,168,335 | C→G | 16.1% | N478K (AAC→AAG) | fusA → | protein chain elongation factor EF‑G |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,168,335 | 0 | C→G | 16.1% | 152.5 ‑1.3 ‑1.3 | 292 | N478K (AAC→AAG) | fusA | protein chain elongation factor EF‑G |
| Reads supporting (aligned to +/- strand): new base (18/29): ref base (117/128): total (135/157) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.65e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.10e-02 | ||||||||||
Only 100 of 300 total aligned reads displayed.
TCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCTGGTGGTC > NC_007779/4168235‑4168435 | tCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAAc > 1:4483512/1‑101 (MQ=255) ccGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACg < 1:12716434/101‑1 (MQ=255) cGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGt < 1:13680758/101‑1 (MQ=255) cGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGt < 1:10921083/101‑1 (MQ=255) gtgtATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGtt < 1:6411026/101‑1 (MQ=255) tgtATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTg < 1:8774061/101‑1 (MQ=255) gtATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGa < 1:3718639/101‑1 (MQ=255) aTGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAg > 1:8420111/1‑101 (MQ=255) tGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGAGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGc < 1:12044395/101‑1 (MQ=255) aCTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGaa > 1:2063318/1‑101 (MQ=255) gACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGt > 1:14639577/1‑101 (MQ=255) aCGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTa < 1:14096864/101‑1 (MQ=255) gaagaaTCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAgg < 1:1815329/101‑1 (MQ=255) agaaTCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTa > 1:1943240/1‑101 (MQ=255) gaaTCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTaa < 1:12939813/101‑1 (MQ=255) aTCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAAc > 1:8135693/1‑101 (MQ=255) tAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGc > 1:14810821/1‑101 (MQ=255) aaCCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCa > 1:8208508/1‑101 (MQ=255) cAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGt > 1:708773/1‑101 (MQ=255) gACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTg > 1:12460554/1‑101 (MQ=255) aCCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGc < 1:10152002/101‑1 (MQ=255) atcatcGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGAGCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTa > 1:14529964/1‑101 (MQ=255) atcatcGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTa > 1:1696608/1‑101 (MQ=255) tcatcGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATAAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTAc < 1:6013871/101‑1 (MQ=255) tcatcGCGGGTATGGGCGAACTGCACCTCGACATCATCATTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTAc < 1:9516509/101‑1 (MQ=255) tatcggcggTATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTAcc < 1:5514561/94‑1 (MQ=255) catcGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTAcc < 1:3298829/101‑1 (MQ=255) atcggcggTATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCg < 1:1501417/95‑1 (MQ=255) cgcgGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTg < 1:2891761/101‑1 (MQ=255) cgcgGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTg > 1:11037268/1‑101 (MQ=255) ggcggTATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGa < 1:3458531/98‑1 (MQ=255) ggcggTATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGa < 1:1774040/98‑1 (MQ=255) gcgGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGa > 1:8833530/1‑101 (MQ=255) gcgGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGa < 1:7447473/101‑1 (MQ=255) gcggTATGGGCGAGCTCCGCCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGag < 1:11818992/99‑2 (MQ=255) gcggTATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGag < 1:6084079/99‑2 (MQ=255) cggTATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGaga < 1:10653087/100‑3 (MQ=255) ggTATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGAc > 1:440453/1‑101 (MQ=255) ggTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAAc < 1:7754071/101‑1 (MQ=255) ggTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAAc < 1:7856440/101‑1 (MQ=255) tATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGAcca > 1:4034227/1‑99 (MQ=255) tATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGAcca > 1:4203043/1‑99 (MQ=255) tATGGGCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGAcca < 1:5942333/101‑3 (MQ=255) tATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTa > 1:4875394/1‑101 (MQ=255) tGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATc > 1:8046412/1‑101 (MQ=255) gggCGAGCTCTACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGACCATcc < 1:2744437/101‑1 (MQ=255) gggCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAGGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGACCATcc < 1:5111033/101‑1 (MQ=255) gggCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGACCATcc > 1:13825995/1‑101 (MQ=255) gggCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGACCATcc < 1:8985259/101‑1 (MQ=255) gggCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATcc < 1:6952597/101‑1 (MQ=255) ggCGAGCTCCACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGACCATCCg < 1:12175223/101‑1 (MQ=255) cGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGcc < 1:1109025/101‑1 (MQ=255) agctccACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGACCATCCGCAAg < 1:11952466/96‑1 (MQ=255) agctccACCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGACCATCCGCAAg > 1:10776142/6‑101 (MQ=255) aCTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGa > 1:6563107/1‑101 (MQ=255) aCTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGa < 1:5725308/101‑1 (MQ=255) tGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGaaa > 1:6388092/1‑101 (MQ=255) tGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGaaa < 1:3176158/101‑1 (MQ=255) tGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGaaa < 1:2566862/101‑1 (MQ=255) cACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGt < 1:11415153/101‑1 (MQ=255) aCCTCGACGTCCTGGTTGACCGCATGAAGCGTGAGTTCAAGGTCGAAGCAAACATCGGTAACCCGCAGGTTGCTTACCGCGAGACCATCCGCAAgccggtc > 1:9335313/1‑95 (MQ=255) tCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTAcc < 1:298572/101‑1 (MQ=255) tCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTAcc > 1:26447/1‑101 (MQ=255) cGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCg < 1:9955093/101‑1 (MQ=255) gACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGa < 1:7588506/101‑1 (MQ=255) atcatcGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCATGAAACTATCCGCCAGAAAGTTACCGATGt < 1:2219898/101‑1 (MQ=255) tcatcGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGtt > 1:2027688/1‑101 (MQ=255) taatcGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGtt < 1:13322070/99‑1 (MQ=255) atcGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGa > 1:2268413/1‑101 (MQ=255) tcGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGaa < 1:8550320/101‑1 (MQ=255) tcGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGaa > 1:4526137/1‑101 (MQ=255) cGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAg < 1:8304561/101‑1 (MQ=255) ttGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAgga > 1:5232433/1‑100 (MQ=255) ttGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGt < 1:9117370/101‑1 (MQ=255) gACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTaa < 1:10556260/101‑1 (MQ=255) aCCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTaaa > 1:563368/1‑101 (MQ=255) gTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAacac > 1:3052537/1‑101 (MQ=255) gTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAacac < 1:7249601/101‑1 (MQ=255) aTGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACAcgc < 1:13223301/101‑1 (MQ=255) aTGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACAcgc < 1:3926308/101‑1 (MQ=255) aTGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACAcgc > 1:4724119/1‑101 (MQ=255) gAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGa > 1:11266008/1‑101 (MQ=255) gAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGa > 1:14409461/1‑101 (MQ=255) aGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGaaa < 1:10603473/101‑1 (MQ=255) cGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACa < 1:14171731/101‑1 (MQ=255) gTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAg < 1:1353528/101‑1 (MQ=255) tGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGt > 1:4956139/1‑101 (MQ=255) gAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTc > 1:735188/1‑101 (MQ=255) gAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTc > 1:5033672/1‑101 (MQ=255) ttCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCtgg < 1:8892297/101‑1 (MQ=255) tCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCtggt < 1:1609517/101‑1 (MQ=255) tCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCtggt < 1:629032/101‑1 (MQ=255) tCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCtggt < 1:12776484/101‑1 (MQ=255) cAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCtggtg > 1:2541439/1‑101 (MQ=255) cAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCtggtg > 1:3349646/1‑101 (MQ=255) aaCGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCtggtgg < 1:13937890/101‑1 (MQ=255) aaCGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCtggtgg > 1:7655702/1‑101 (MQ=255) cGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACTGATGTTGAAGGTAAACACGCGAAACAGTCTGgtggtc < 1:8656348/101‑1 (MQ=255) cGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCTGgtggtc < 1:6667380/101‑1 (MQ=255) cGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCTGgtggtc < 1:9744965/101‑1 (MQ=255) | TCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCTGGTGGTC > NC_007779/4168235‑4168435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |