| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,169,297 | G→C | 13.0% | D71H (GAC→CAC) | tufA → | protein chain elongation factor EF‑Tu |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,169,297 | 0 | G→C | 13.0% | 38.7 ‑4.0 ‑0.5 | 108 | D71H (GAC→CAC) | tufA | protein chain elongation factor EF‑Tu |
| Reads supporting (aligned to +/- strand): new base (2/12): ref base (47/47): total (49/59) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.90e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.27e-01 | ||||||||||
Only 100 of 115 total aligned reads displayed.
TAAAACCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCT > NC_007779/4169197‑4169397 | tAAAACCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACg > 1:2599932/1‑101 (MQ=32) aaaaCCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGa < 1:3216004/101‑1 (MQ=32) aaaCCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGac > 1:1839761/1‑101 (MQ=33) aaaCCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGac < 1:3160919/101‑1 (MQ=32) aaCCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGaca > 1:9371398/1‑101 (MQ=32) aaCCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGaca > 1:5427766/1‑101 (MQ=32) aaCCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGaca < 1:12028523/101‑1 (MQ=32) aaCCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGaca < 1:3421420/101‑1 (MQ=32) ccTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACAcc < 1:829161/101‑1 (MQ=32) cTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACAccc > 1:3256524/1‑101 (MQ=32) cTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACAccc > 1:13547029/1‑101 (MQ=32) tACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACAcccc < 1:6566669/101‑1 (MQ=32) tACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACAcccc < 1:13746992/101‑1 (MQ=32) aCGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCg > 1:1889069/1‑101 (MQ=32) aCGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCg > 1:7478188/1‑101 (MQ=32) cggcggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGa < 1:11039692/101‑1 (MQ=32) cggcggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGa > 1:8834744/1‑101 (MQ=32) ggcggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGAc > 1:1243737/1‑101 (MQ=32) ggcggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGAc > 1:8640225/1‑101 (MQ=32) ggcggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGAc < 1:5276358/101‑1 (MQ=32) ggcggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGAc > 1:487070/1‑101 (MQ=33) gcggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGAcc < 1:2737201/101‑1 (MQ=32) gcggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGAcc > 1:1403550/1‑101 (MQ=32) ggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCg > 1:4912007/1‑101 (MQ=32) ggTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCg < 1:5843119/101‑1 (MQ=32) gTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGt > 1:3945278/1‑101 (MQ=32) tgctgcTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTc < 1:13181247/101‑1 (MQ=32) tgctgcTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTc < 1:4915180/101‑1 (MQ=32) gctgctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAGAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCa < 1:11455975/101‑1 (MQ=17) ctgctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTAAc < 1:4101343/101‑1 (MQ=17) ctgctCGTGAATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCAc > 1:10130267/1‑101 (MQ=17) gctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTa > 1:3697553/1‑101 (MQ=32) gctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTa < 1:4904307/101‑1 (MQ=32) gctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTa > 1:1225245/1‑101 (MQ=32) gctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGCTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTa < 1:11858125/101‑1 (MQ=17) ctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTAc < 1:150981/101‑1 (MQ=32) ctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTAc > 1:8861442/1‑101 (MQ=32) ctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTAc < 1:10242226/101‑1 (MQ=32) ctCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTAc < 1:10234179/101‑1 (MQ=32) tCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACg < 1:1361812/101‑1 (MQ=32) cGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGc > 1:11291474/1‑101 (MQ=32) gTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGca > 1:14010239/1‑101 (MQ=31) gTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGca > 1:5277374/1‑101 (MQ=31) gTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGca > 1:15194421/1‑101 (MQ=31) tGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGcac > 1:8683457/1‑101 (MQ=11) tGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGcac < 1:5346277/101‑1 (MQ=11) acacTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTgctgct < 1:8969986/101‑1 (MQ=11) acacTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTgctgct > 1:1183981/1‑101 (MQ=11) acacTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTgctgct < 1:5916857/101‑1 (MQ=11) cgtctcgcACGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTc < 1:10044258/94‑1 (MQ=2) cgtctcgcACGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTc < 1:3284404/94‑1 (MQ=2) gtctcgcACGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCa < 1:5636874/95‑1 (MQ=2) acTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCa > 1:10121127/1‑101 (MQ=32) acTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCa < 1:5905181/101‑1 (MQ=32) acTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCa > 1:5219838/1‑101 (MQ=32) tctcgcACGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCAg < 1:6424250/96‑1 (MQ=2) tctcgcACGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCAg < 1:3633632/96‑1 (MQ=2) tctcgcACGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCAg < 1:7199432/96‑1 (MQ=2) ttCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGa < 1:14000799/101‑1 (MQ=32) ttCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGa > 1:6627991/1‑101 (MQ=32) ttCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGa < 1:11780201/101‑1 (MQ=32) ttCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGa > 1:10896206/1‑101 (MQ=32) ttCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGa < 1:9747902/101‑1 (MQ=32) tctcACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGAt < 1:6112270/101‑1 (MQ=32) ctcACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATg < 1:11286160/101‑1 (MQ=32) cgcACGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCAGATg < 1:6368232/99‑1 (MQ=2) tcACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATgg < 1:4860957/101‑1 (MQ=32) gcACGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCAGATgg > 1:2413898/2‑101 (MQ=2) cACGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCAGATGGa < 1:14935360/101‑1 (MQ=2) cACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGa > 1:213703/1‑101 (MQ=32) cACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGa < 1:4649622/101‑1 (MQ=32) aCGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCAGATGGAc < 1:6647398/101‑1 (MQ=2) aCGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCAGATGGAc < 1:4176891/101‑1 (MQ=2) aCGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGAc > 1:8146370/1‑101 (MQ=32) aCGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGAc < 1:7557719/101‑1 (MQ=32) aCGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGAc > 1:4011159/1‑101 (MQ=32) cGTTGAGTACCAGACCGAGAAGCGTCACTACGCTCACGTCGACGCTCCGGGCCACGCCGACTACATCAAGAACATGATCACCGGTGCTGCTCAGATGGACg < 1:9330761/101‑1 (MQ=2) cGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACg > 1:6833539/1‑101 (MQ=32) cGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACg < 1:1604695/101‑1 (MQ=32) ttGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgc < 1:14583839/101‑1 (MQ=32) ttGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgc > 1:9242016/1‑101 (MQ=32) ttGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgc < 1:419487/101‑1 (MQ=32) ttGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgc > 1:12726102/1‑101 (MQ=32) tGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgcg > 1:9836238/1‑101 (MQ=32) tGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgcg < 1:2354616/101‑1 (MQ=33) tGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgcg > 1:5812396/1‑101 (MQ=32) gAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgcgc < 1:5305805/101‑1 (MQ=33) gAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgcgc < 1:13698253/101‑1 (MQ=33) gAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGgcgc < 1:14875435/101‑1 (MQ=33) aTACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGa < 1:7132742/101‑1 (MQ=32) aTACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGa < 1:9742270/101‑1 (MQ=33) tACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGAt < 1:2873872/101‑1 (MQ=33) aCGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATc > 1:5043964/1‑101 (MQ=32) aCGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATc > 1:8941787/1‑101 (MQ=32) cGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATcc > 1:7634334/1‑101 (MQ=32) gACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCt > 1:7505216/1‑101 (MQ=32) gACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCt < 1:11323146/101‑1 (MQ=33) gACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCt < 1:4242597/101‑1 (MQ=33) gACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCt > 1:3948897/1‑101 (MQ=32) gACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCt < 1:6553429/101‑1 (MQ=33) | TAAAACCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCT > NC_007779/4169197‑4169397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |