| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,442,189 | C→T | 4.2% | R536R (CGC→CGT) | thiC → | thiamin (pyrimidine moiety) biosynthesis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,442,189 | 0 | C→T | 4.2% | 11.8 0.0 ‑0.0 | 232 | R536R (CGC→CGT) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| Reads supporting (aligned to +/- strand): new base (5/5): ref base (112/110): total (117/115) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 249 total aligned reads displayed.
GTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATGAAACCC > NC_007779/3442089‑3442289 | tCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgcg < 1:3011242/101‑1 (MQ=255) cTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGa > 1:9855623/1‑101 (MQ=255) tGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGAt > 1:12294774/1‑101 (MQ=255) tGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGAt > 1:5044282/1‑101 (MQ=255) gCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATa > 1:10252010/1‑101 (MQ=255) gCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATa > 1:12663990/1‑101 (MQ=255) aaTAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGc > 1:10732806/1‑101 (MQ=255) aTAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGcc > 1:9050720/1‑101 (MQ=255) tAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCa < 1:11268546/101‑1 (MQ=255) tAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCa > 1:14556314/1‑101 (MQ=255) aaaGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCAt > 1:2389967/1‑101 (MQ=255) aaaGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCAt < 1:3597182/101‑1 (MQ=255) aagaagATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATg < 1:6428713/101‑1 (MQ=255) aagaagATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATg > 1:5238375/1‑101 (MQ=255) agaagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGTTAACGCCATGt < 1:9562789/101‑1 (MQ=255) agaagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGt < 1:2503921/101‑1 (MQ=255) gaagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTc < 1:14077756/101‑1 (MQ=255) aagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCg > 1:7627507/1‑101 (MQ=255) aagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCg > 1:5848072/1‑101 (MQ=255) aagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCg > 1:11045515/1‑101 (MQ=255) aTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGaaa < 1:1033638/101‑1 (MQ=255) aTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGaaa < 1:13169385/101‑1 (MQ=255) tGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAg < 1:13499765/101‑1 (MQ=255) gTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGc > 1:13644082/1‑101 (MQ=255) gTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGc < 1:2755114/101‑1 (MQ=255) gTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGc > 1:12823925/1‑101 (MQ=255) gTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGc < 1:11637683/101‑1 (MQ=255) ttAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGTGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGcc > 1:9361846/1‑101 (MQ=255) ttAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGcc > 1:4082501/1‑101 (MQ=255) aGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGc < 1:432747/101‑1 (MQ=255) aGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGc > 1:4401339/1‑101 (MQ=255) cAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCtt > 1:1152400/1‑101 (MQ=255) cAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCtt < 1:11816470/101‑1 (MQ=255) aGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTc < 1:8000605/101‑1 (MQ=255) ggggCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCg > 1:11676253/1‑101 (MQ=255) ggCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGaa > 1:8363271/1‑101 (MQ=255) gCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAAt > 1:10839746/1‑101 (MQ=255) cTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAAtt > 1:966797/1‑101 (MQ=255) ttATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAAttt < 1:12610902/101‑1 (MQ=255) tATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTc < 1:11878862/101‑1 (MQ=255) tATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTc < 1:6217546/101‑1 (MQ=255) aTCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCg > 1:11368667/1‑101 (MQ=255) cACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCt < 1:2788732/101‑1 (MQ=255) ccTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTgg < 1:1586436/101‑1 (MQ=255) ccTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTgg > 1:3842102/1‑101 (MQ=255) tataAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGa < 1:8540489/101‑1 (MQ=255) ataAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGaa < 1:3319403/101‑1 (MQ=255) taAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAg > 1:10183041/1‑101 (MQ=255) aGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGAc < 1:14391302/101‑1 (MQ=255) tgctgcCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGt > 1:1313830/1‑101 (MQ=255) gctgcCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGtt > 1:6771542/1‑101 (MQ=255) cgcgcACGCCGCTGACCTGGCAAAGGGGCTGCCGCGCGCTCAGGAGCGTGACGACGCGCTGTCGAAGGCCCGTTTCGAGTTCCGTTGGCATGACCAGtttg > 1:15125995/5‑100 (MQ=255) gcACGCCGCTGACCTGGCAAAGGGGCTGCCGCGCGCTCAGGAGCGTGACGACGCGCTGTCGAAGGCCCGTTTCGAGTTCCGTTGGCATGACCAGtttgcac < 1:1915752/100‑5 (MQ=255) gccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTNNNNNNNNNAGTTTAATCTggn > 1:685481/1‑100 (MQ=255) gccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGc > 1:4730944/1‑101 (MQ=255) gccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGc > 1:13882610/1‑101 (MQ=255) ccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGcc < 1:13789048/101‑1 (MQ=255) cgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGccc < 1:3395606/101‑1 (MQ=255) gcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCt > 1:5291613/1‑101 (MQ=255) cTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTc < 1:7554664/101‑1 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg > 1:812880/1‑101 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg > 1:10647228/1‑101 (MQ=255) gACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGa < 1:12206972/101‑1 (MQ=255) aCCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGAc < 1:12373054/101‑1 (MQ=255) ccTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGAcc < 1:3079607/101‑1 (MQ=255) ccTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGAcc < 1:7901880/101‑1 (MQ=255) ccTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCACTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGAcc > 1:434011/1‑101 (MQ=255) tGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCg > 1:6261977/1‑101 (MQ=255) tGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCg > 1:9883645/1‑101 (MQ=255) tGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCg > 1:1004847/1‑101 (MQ=255) ggCGAAAGGGCATCCGGGCGCTCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCTCTGGGAAGCCCAGTTTAATCTGGCCCTCGACCCGt < 1:90217/101‑1 (MQ=255) cGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGttt < 1:1756884/101‑1 (MQ=255) gAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTa > 1:4807295/1‑101 (MQ=255) aaGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAcc < 1:10514536/101‑1 (MQ=255) aaGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAcc < 1:1102842/101‑1 (MQ=255) aaGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAcc > 1:7774675/1‑101 (MQ=255) aaGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAcc < 1:7412482/101‑1 (MQ=255) aGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAccg > 1:8701616/1‑101 (MQ=255) aGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAccc > 1:7432170/1‑100 (MQ=255) gggCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAccgc > 1:3796445/1‑101 (MQ=255) gCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAccgccc > 1:3898254/1‑101 (MQ=255) aTCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAccgcccgc < 1:421846/101‑1 (MQ=255) tCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCcgcg < 1:8202853/101‑1 (MQ=255) gggCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCtt < 1:12055566/101‑1 (MQ=255) gggCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCtt < 1:6704617/101‑1 (MQ=255) gggCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCtt > 1:5455159/1‑101 (MQ=255) gggCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCtt < 1:12967810/101‑1 (MQ=255) gcgcgcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTAt > 1:6588645/1‑101 (MQ=255) cgcgcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATc > 1:11095502/1‑101 (MQ=255) gcgcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTAGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCa > 1:5999153/1‑101 (MQ=255) cgcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCAc > 1:4549946/1‑101 (MQ=255) gcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACg > 1:2091998/1‑101 (MQ=255) aaaTTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACTAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGAt > 1:9126099/1‑101 (MQ=255) aaaTTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGAt < 1:2325368/101‑1 (MQ=255) aaTTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATg > 1:9457395/1‑101 (MQ=255) aaTTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATg > 1:641115/1‑101 (MQ=255) aTTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATGa > 1:141373/1‑101 (MQ=255) tCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATGaaa > 1:4201394/1‑101 (MQ=255) cgcgATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATGAAAc > 1:894653/1‑101 (MQ=255) gcgATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATGAAAca < 1:10448797/101‑2 (MQ=255) | GTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATGAAACCC > NC_007779/3442089‑3442289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |