New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 2320794 =NA (NA)214 (0.980) 132/180 NT 100% intergenic (+633/+11) rcsB/insD DNA‑binding response regulator in two‑component regulatory system with RcsC and YojN/IS2 element protein
?NC_007779 = 2589834 0 (0.000)intergenic (+470/‑69) acrD/yffB aminoglycoside/multidrug efflux system/hypothetical protein

Only 100 of 349 total aligned reads displayed.

ATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/2320893‑2320794
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTAT  <  NC_007779/2589834‑2589735
                                                                                                                                                                                                        
ATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAA                                                                                                     >  1:8334954/1‑101
ATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAA                                                                                                     >  1:8571299/1‑101
ATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAA                                                                                                     >  1:7825378/1‑101
ATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAA                                                                                                     >  1:1031164/1‑101
ATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAA                                                                                                     <  1:6632717/101‑1
  AGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATc                                                                                                   <  1:1642041/101‑2
  AGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATc                                                                                                   <  1:6432096/101‑2
  AGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATc                                                                                                   <  1:10731080/101‑2
  AGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT                                                                                                   <  1:878344/101‑1
  AGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT                                                                                                   <  1:3242651/101‑1
   GTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATcg                                                                                                  <  1:6858261/101‑3
   GTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA                                                                                                  <  1:10562141/101‑1
   GTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTA                                                                                                  <  1:9696118/101‑1
     GCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATcgct                                                                                                <  1:3730130/101‑5
     GCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATt                                                                                                <  1:3479759/101‑2
      CGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATtt                                                                                               >  1:6239821/1‑99
       GCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATcgctat                                                                                              >  1:10985380/1‑95
       GCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATcgctat                                                                                              <  1:5182212/101‑7
       GCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATcgctat                                                                                              <  1:9745866/101‑7
       GCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATtta                                                                                              >  1:5034243/1‑98
       GCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATtta                                                                                              >  1:1971238/1‑98
        CTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATcgctatc                                                                                             >  1:4072657/1‑94
        CTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATttat                                                                                             >  1:2675340/1‑97
        CTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGCGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATttat                                                                                             <  1:5972877/101‑5
         TGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATcgctatcg                                                                                            <  1:5736865/101‑9
         TGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATcgctatcg                                                                                            <  1:5412423/101‑9
         TGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGA                                                                                            <  1:3145222/101‑1
         TGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGA                                                                                            <  1:1473069/101‑1
          GGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATttatat                                                                                           <  1:5923684/101‑7
           GGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATcgctatcgct                                                                                          >  1:7273327/1‑91
           GGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAA                                                                                          <  1:3581675/101‑1
            GTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATttatatga                                                                                         <  1:10807973/101‑9
                 CGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAAC                                                                                    <  1:7383192/101‑1
                 CGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAAC                                                                                    <  1:4317880/101‑1
                   CTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACAT                                                                                  >  1:3370083/1‑101
                    TCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATT                                                                                 >  1:640248/1‑101
                    TCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATT                                                                                 <  1:1368600/101‑1
                     CGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTA                                                                                <  1:9120020/101‑1
                      GCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATTCAATTATCAGGAAATATAACATTAT                                                                               <  1:7918332/101‑1
                          CGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAA                                                                           <  1:4615087/101‑1
                          CGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAA                                                                           >  1:8770354/1‑101
                          CGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAA                                                                           >  1:1779794/1‑101
                            GGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGT                                                                         <  1:10478442/101‑1
                            GGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAAAATTATCGAAGT                                                                         >  1:8196375/1‑101
                              AATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTAT                                                                       >  1:4569574/1‑101
                                TATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTC                                                                     <  1:10210735/101‑1
                                  TCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAA                                                                   <  1:1825045/101‑1
                                    TGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAAT                                                                 >  1:2800489/1‑101
                                     GCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATT                                                                >  1:6367056/1‑101
                                     GCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATT                                                                <  1:8016072/101‑1
                                      CGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTA                                                               <  1:3804238/101‑1
                                         CAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACA                                                            >  1:901576/1‑101
                                          AGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGCGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAA                                                           <  1:6117881/101‑1
                                            CGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACT                                                         >  1:3631222/1‑101
                                             GGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTA                                                        >  1:9850509/1‑101
                                              GGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTAT                                                       <  1:7450180/101‑1
                                               GCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATT                                                      >  1:11011305/1‑101
                                               GCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATT                                                      >  1:4098450/1‑101
                                               GCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATT                                                      <  1:8484976/101‑1
                                                   GTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAAT                                                  <  1:1161328/101‑1
                                                    TAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATA                                                 <  1:2019777/101‑1
                                                    TAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATA                                                 >  1:4221442/1‑101
                                                     AATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAA                                                >  1:5284744/1‑101
                                                      ATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAAT                                               <  1:5060528/101‑1
                                                      ATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAAT                                               <  1:6043500/101‑1
                                                      ATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAAT                                               <  1:291134/101‑1
                                                          GTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTA                                           <  1:7619127/101‑1
                                                            TAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAA                                         <  1:7578500/101‑1
                                                             AAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAAGAACTATTAAATAATATTAAAC                                        >  1:9409692/1‑101
                                                                 GATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTT                                    <  1:3427588/101‑1
                                                                 GATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTT                                    <  1:8503208/101‑1
                                                                  ATAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTT                                   >  1:4342684/1‑101
                                                                   TAACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAGCATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTT                                  <  1:1001572/101‑1
                                                                    AACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTA                                 <  1:9273090/101‑1
                                                                     ACAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGAATTCAAATTAACAACTGTTAAATAATATTAAACATTTTTAA                                >  1:3930900/1‑101
                                                                      CAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAAC                               <  1:498927/101‑1
                                                                      CAGATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAAC                               <  1:2218697/101‑1
                                                                         ATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTA                            >  1:9608202/1‑101
                                                                         ATGTCTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTA                            <  1:6684993/101‑1
                                                                             CTGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACA                        >  1:10142763/1‑101
                                                                              TGGAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACAT                       >  1:5474876/1‑101
                                                                                GAAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTA                     >  1:3341921/1‑101
                                                                                 AAATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAA                    <  1:1544118/101‑1
                                                                                  AATATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAG                   <  1:3910450/101‑1
                                                                                    TATAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAA                 >  1:6292869/1‑101
                                                                                      TAGGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATA               >  1:271280/1‑101
                                                                                        GGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATT             <  1:9197689/101‑1
                                                                                        GGGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATT             >  1:8439390/1‑101
                                                                                         GGGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTC            <  1:4720087/101‑1
                                                                                          GGCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCA           <  1:6929609/101‑1
                                                                                           GCAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCAT          <  1:8262565/101‑1
                                                                                            CAAATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATC         >  1:2362964/1‑101
                                                                                              AATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTT       >  1:4161933/1‑101
                                                                                               ATCCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTG      <  1:811934/101‑1
                                                                                                 CCAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTT    <  1:8622480/101‑1
                                                                                                  CAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTA   >  1:1214639/1‑101
                                                                                                  CAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTA   >  1:485210/1‑101
                                                                                                  CAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTA   <  1:7004180/101‑1
                                                                                                  CAATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTA   <  1:10082856/101‑1
                                                                                                   AATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTAT  >  1:9520417/1‑101
                                                                                                                                                                                                        
ATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/2320893‑2320794
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTATCAGGAAATATAACATTATCGAAGTATTCAAATTAACAACTATTAAATAATATTAAACATTTTTAACGTAAACATTAAGAATATTCATCTTGTTAT  <  NC_007779/2589834‑2589735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.