New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 19072888 (0.040)241 (1.110) 126/180 NT 96.8% intergenic (+315/‑114) yobD/yebN inner membrane protein/inner membrane protein
?NC_007779 2411458 = NA (NA)intergenic (‑147/+15) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein

Only 100 of 467 total aligned reads displayed.

GTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATACCCCGG  >  NC_007779/1907188‑1907388
                                                                                                    |                                                                                                    
     cGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaa                                                                                                 >  1:4406392‑M1/1‑96 (MQ=255)
      gATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaat                                                                                                >  1:8945471‑M1/1‑95 (MQ=255)
      gATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaat                                                                                                <  1:5987045‑M1/101‑7 (MQ=255)
      aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCaa                                                                                                <  1:4160146‑M1/15‑1 (MQ=255)
      aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCaa                                                                                                <  1:1235508‑M1/15‑1 (MQ=255)
        gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATc                                                                                              <  1:1354828‑M1/17‑1 (MQ=255)
         agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCg                                                                                             <  1:8043358‑M1/18‑1 (MQ=255)
          tCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgact                                                                                            >  1:7441799‑M1/1‑91 (MQ=255)
           ccAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactc                                                                                           <  1:3406801‑M1/101‑12 (MQ=255)
             aGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactcca                                                                                         >  1:9149380‑M1/1‑88 (MQ=255)
               aTTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaac                                                                                       <  1:9947931‑M1/101‑16 (MQ=255)
                  tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTg                                                                                    <  1:7166503‑M1/27‑1 (MQ=255)
                  tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTg                                                                                    >  1:1668562‑M1/75‑101 (MQ=255)
                  ccGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaactta                                                                                    <  1:7345993‑M1/101‑19 (MQ=255)
                   gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGc                                                                                   >  1:11047461‑M1/74‑101 (MQ=255)
                   cGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttat                                                                                   >  1:4777180‑M1/1‑82 (MQ=255)
                     gAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACTATATGCAggtaatgactccaacttattg                                                                                 <  1:6985124‑M1/101‑22 (MQ=255)
                      agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATg                                                                                >  1:8514237‑M1/71‑101 (MQ=255)
                      aaaTGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattga                                                                                >  1:10014705‑M1/1‑79 (MQ=255)
                       aaTGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgat                                                                               >  1:4342649‑M1/1‑78 (MQ=255)
                        aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGaa                                                                              <  1:785305‑M1/33‑1 (MQ=255)
                         tGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatag                                                                             <  1:6505567‑M1/101‑26 (MQ=255)
                          gTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagt                                                                            <  1:1569644‑M1/101‑27 (MQ=255)
                          gTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagt                                                                            >  1:3083420‑M1/1‑75 (MQ=255)
                          gTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagt                                                                            <  1:10388148‑M1/101‑27 (MQ=255)
                          acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAcg                                                                            <  1:8114984‑M1/35‑1 (MQ=255)
                           tACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtg                                                                           >  1:4477995‑M1/1‑74 (MQ=255)
                           cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAcgc                                                                           >  1:4080775‑M1/66‑101 (MQ=255)
                           cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAcgc                                                                           >  1:3900519‑M1/66‑101 (MQ=255)
                           cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAcgc                                                                           <  1:8454748‑M1/36‑1 (MQ=255)
                            agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAcgcg                                                                          >  1:8568100‑M1/65‑101 (MQ=255)
                             cGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgtt                                                                         <  1:5330950‑M1/101‑30 (MQ=255)
                             cGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgtt                                                                         <  1:10903072‑M1/101‑30 (MQ=255)
                               agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGaaa                                                                       >  1:9509289‑M1/62‑101 (MQ=255)
                                gtCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgtttta                                                                      >  1:3555725‑M1/1‑69 (MQ=255)
                                    ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCAt                                                                  >  1:2599401‑M1/57‑101 (MQ=255)
                                    aCATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgtt                                                                  >  1:10571201‑M1/1‑65 (MQ=255)
                                     cATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttc                                                                 >  1:8616751‑M1/1‑64 (MQ=255)
                                       tACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcag                                                               <  1:6726374‑M1/101‑40 (MQ=255)
                                       gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCAc                                                               >  1:9633469‑M1/54‑101 (MQ=255)
                                        aCTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcaga                                                              >  1:3657671‑M1/1‑61 (MQ=255)
                                         cTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagat                                                             >  1:4285575‑M1/1‑60 (MQ=255)
                                         cTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagat                                                             >  1:6181199‑M1/1‑60 (MQ=255)
                                         cTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagat                                                             <  1:3297386‑M1/101‑42 (MQ=255)
                                          tCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagata                                                            <  1:2664070‑M1/101‑43 (MQ=255)
                                          cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGc                                                            >  1:697673‑M1/51‑101 (MQ=255)
                                          cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGc                                                            >  1:3837524‑M1/51‑101 (MQ=255)
                                            cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCtt                                                          <  1:9782415‑M1/53‑1 (MQ=255)
                                            cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCtt                                                          >  1:8863650‑M1/49‑101 (MQ=255)
                                             ttGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatg                                                         <  1:5881888‑M1/101‑46 (MQ=255)
                                              tGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                        >  1:3744347‑M1/1‑55 (MQ=255)
                                                aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCttgttg                                                      <  1:2289070‑M1/57‑1 (MQ=255)
                                                 aaaaCGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                     >  1:9460750‑M1/1‑52 (MQ=255)
                                                   aacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTc                                                   >  1:9021092‑M1/42‑101 (MQ=255)
                                                   aacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTc                                                   >  1:6265874‑M1/42‑101 (MQ=255)
                                                   aaCGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                   >  1:92972‑M1/1‑50 (MQ=255)
                                                    acaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCa                                                  >  1:6745964‑M1/41‑101 (MQ=255)
                                                     caccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCAt                                                 >  1:7103080‑M1/40‑101 (MQ=255)
                                                      gTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac                                                >  1:7693713‑M1/1‑47 (MQ=255)
                                                      accatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATg                                                >  1:3165282‑M1/39‑101 (MQ=255)
                                                       tGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                               >  1:7557455‑M1/1‑46 (MQ=255)
                                                          cACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                            <  1:6234519‑M1/101‑59 (MQ=255)
                                                           catacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGc                                           <  1:11000442‑M1/68‑1 (MQ=255)
                                                           aCGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                           <  1:6676661‑M1/101‑60 (MQ=255)
                                                            atacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCa                                          >  1:4551984‑M1/33‑101 (MQ=255)
                                                             tacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCAt                                         <  1:1316007‑M1/70‑1 (MQ=255)
                                                              tACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                        <  1:10068244‑M1/101‑63 (MQ=255)
                                                                 ctaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGttt                                     >  1:6489005‑M1/28‑101 (MQ=255)
                                                                  taaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTg                                    >  1:6899084‑M1/27‑101 (MQ=255)
                                                                  gACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                    <  1:7238467‑M1/101‑67 (MQ=255)
                                                                      gAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                >  1:9856049‑M1/1‑31 (MQ=255)
                                                                      gAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                <  1:5215332‑M1/101‑71 (MQ=255)
                                                                        agtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTgggg                              >  1:9402483‑M1/21‑101 (MQ=255)
                                                                         tACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                             >  1:10737422‑M1/1‑28 (MQ=255)
                                                                         gtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTggggg                             >  1:2107109‑M1/20‑101 (MQ=255)
                                                                          taagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGc                            >  1:4932474‑M1/19‑101 (MQ=255)
                                                                          taagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGc                            >  1:5366776‑M1/19‑101 (MQ=255)
                                                                          aCTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                            >  1:1961698‑M1/1‑27 (MQ=255)
                                                                           aagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCg                           <  1:9234129‑M1/84‑1 (MQ=255)
                                                                               tggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCgatga                       <  1:8265837‑M1/88‑1 (MQ=255)
                                                                               cagtcagGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                       >  1:400144‑M1/1‑22 (MQ=255)
                                                                                   cagGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga                   >  1:5536792‑M1/1‑18 (MQ=255)
                                                                                   agcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGAtgtg                   <  1:9671829‑M1/92‑1 (MQ=255)
                                                                                     ggCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                 >  1:6304603‑M1/1‑16 (MQ=255)
                                                                                     catcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGtt                 >  1:10229548‑M1/8‑101 (MQ=255)
                                                                                     catcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGtt                 >  1:8189969‑M1/8‑101 (MQ=255)
                                                                                      gCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacg                >  1:2486406‑M1/1‑15 (MQ=255)
                                                                                       cGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgtacagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga               >  1:4615028‑M1/1‑14 (MQ=255)
                                                                                         accCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTAt             >  1:2709277‑M1/4‑101 (MQ=255)
                                                                                          ccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATg            >  1:5667788‑M1/3‑101 (MQ=255)
                                                                                           aCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc           >  1:1775564‑M1/1‑10 (MQ=255)
                                                                                           aCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc           <  1:10471606‑M1/101‑92 (MQ=255)
                                                                                            ccATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg          <  1:7040890‑M1/101‑93 (MQ=255)
                                                                                             cATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGCTGTTCATGTATGCATATTTGTTGGGGGCCAGGATGTGTTTTTTGGAt         >  1:3488760/1‑101 (MQ=255)
                                                                                              atatGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATa        <  1:8771783/101‑1 (MQ=255)
                                                                                                atGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgactt      <  1:2951317‑M1/101‑97 (MQ=255)
                                                                                                 tGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc     <  1:2787817‑M1/101‑98 (MQ=255)
                                                                                                  gCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc    <  1:6125762‑M1/101‑99 (MQ=255)
                                                                                                   cAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg   >  1:6091408‑M1/1‑2 (MQ=255)
                                                                                                    acaTCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATACCCCgg  >  1:10637866/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
GTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATACCCCGG  >  NC_007779/1907188‑1907388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.