Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 583,898 C→T 1.7% intergenic (+245/+5) appY → / ← ompT DNA‑binding transcriptional activator/outer membrane protease VII

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_007779583,8980C→T 1.7% 2.1 0.0 ‑0.1236intergenic (+245/+5)appY/ompTDNA‑binding transcriptional activator/outer membrane protease VII
Reads supporting (aligned to +/- strand):  new base (2/2):  ref base (113/119):  total (115/121)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.45e-01

Only 100 of 244 total aligned reads displayed.

TAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGTTATTATTGTGATC  >  NC_007779/583798‑583998
                                                                                                    |                                                                                                    
tatttAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGc                                                                                                      >  1:8668691/4‑101 (MQ=255)
tAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGc                                                                                                      <  1:7684831/101‑1 (MQ=255)
 aGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCg                                                                                                     >  1:8106915/1‑101 (MQ=255)
 aGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCg                                                                                                     <  1:3764702/101‑1 (MQ=255)
    taataaCCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTc                                                                                                  >  1:10266060/1‑101 (MQ=255)
    taataaCCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTc                                                                                                  <  1:2485722/101‑1 (MQ=255)
    taataaCCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTc                                                                                                  <  1:1316955/101‑1 (MQ=255)
     aataaCCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCt                                                                                                 <  1:3147690/101‑1 (MQ=255)
        aaCCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTaa                                                                                              >  1:10000505/1‑101 (MQ=255)
        aaCCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTaa                                                                                              >  1:6015585/1‑101 (MQ=255)
        aaCCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTaa                                                                                              >  1:5732181/1‑101 (MQ=255)
        aaCCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTaa                                                                                              >  1:4219811/1‑101 (MQ=255)
          ccTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTaaaa                                                                                            >  1:10048920/1‑101 (MQ=255)
           cTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAAt                                                                                           <  1:9909038/101‑1 (MQ=255)
            ttCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAAtg                                                                                          <  1:4803127/101‑1 (MQ=255)
             tCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAAtgt                                                                                         <  1:3881181/101‑1 (MQ=255)
              cTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAAtgtg                                                                                        <  1:7201354/101‑1 (MQ=255)
              cTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAAtgtg                                                                                        >  1:8502271/1‑101 (MQ=255)
               tGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGGAATTTTAGTTTGCGTTCTTAAAATgtgt                                                                                       >  1:7356746/1‑101 (MQ=255)
               tGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATgtgt                                                                                       <  1:6159136/101‑1 (MQ=255)
                gggTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTa                                                                                      >  1:4473006/1‑101 (MQ=255)
                 ggTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTAGGCGTTCTTAAAATGTGTAc                                                                                     >  1:1442081/1‑101 (MQ=255)
                   tttATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACtt                                                                                   >  1:10990763/1‑101 (MQ=255)
                   tttATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACtt                                                                                   >  1:9639602/1‑101 (MQ=255)
                     tATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTaa                                                                                 >  1:4194766/1‑101 (MQ=255)
                         ttAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGAcc                                                                             >  1:5941086/1‑101 (MQ=255)
                         ttAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGAcc                                                                             <  1:1637292/101‑1 (MQ=255)
                           aaGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcag                                                                           <  1:5266469/101‑1 (MQ=255)
                            aGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcagc                                                                          >  1:7946686/1‑101 (MQ=255)
                            aGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcagc                                                                          >  1:4524648/1‑101 (MQ=255)
                            aGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcagc                                                                          <  1:9044374/101‑1 (MQ=255)
                             gggTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcagca                                                                         <  1:10742459/101‑1 (MQ=255)
                             gggTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcagca                                                                         >  1:1050952/1‑101 (MQ=255)
                              ggTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcagcag                                                                        >  1:10773464/1‑101 (MQ=255)
                              ggTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACcagcag                                                                        <  1:8879510/101‑1 (MQ=255)
                               gTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCagt                                                                       >  1:2975198/1‑101 (MQ=255)
                               gTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCagt                                                                       <  1:6692732/101‑1 (MQ=255)
                               gTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCagt                                                                       >  1:10973827/1‑101 (MQ=255)
                               gTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCagt                                                                       <  1:9189887/101‑1 (MQ=255)
                                 tAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCagtag                                                                     <  1:10279955/101‑1 (MQ=255)
                                      gTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGtgatg                                                                >  1:7378414/1‑101 (MQ=255)
                                       ttACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTTACCTCGGGGGAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGtgatga                                                               >  1:7304828/1‑101 (MQ=255)
                                        tACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGaa                                                              >  1:2827750/1‑101 (MQ=255)
                                         accttGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAg                                                             >  1:8284307/4‑101 (MQ=255)
                                            ttGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTta                                                          <  1:7793694/101‑1 (MQ=255)
                                            ttGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTta                                                          <  1:7766059/101‑1 (MQ=255)
                                                 aTGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGtt                                                     >  1:5096254/1‑101 (MQ=255)
                                                  tGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGTGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGttt                                                    >  1:6574449/1‑101 (MQ=255)
                                                   ggCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGTGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGtttt                                                   <  1:2154266/101‑1 (MQ=255)
                                                   ggCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGtttt                                                   >  1:4680484/1‑101 (MQ=255)
                                                   ggCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGtttt                                                   <  1:5062401/101‑1 (MQ=255)
                                                    gCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTc                                                  >  1:3065466/1‑101 (MQ=255)
                                                     cTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCt                                                 >  1:10849635/1‑101 (MQ=255)
                                                      tAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCta                                                <  1:7233170/101‑1 (MQ=255)
                                                      tAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCta                                                <  1:8427678/101‑1 (MQ=255)
                                                       aGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCtat                                               <  1:2459745/101‑1 (MQ=255)
                                                       aGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCtat                                               >  1:1279688/1‑101 (MQ=255)
                                                          tATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATAcc                                            <  1:1469265/101‑1 (MQ=255)
                                                           aTTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCt                                           >  1:6287093/1‑101 (MQ=255)
                                                           aTTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCt                                           <  1:10109194/101‑1 (MQ=255)
                                                            ttCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTg                                          >  1:8742529/1‑101 (MQ=255)
                                                              ccccGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCt                                        >  1:10463306/1‑101 (MQ=255)
                                                                ccGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTcc                                      >  1:8268693/1‑101 (MQ=255)
                                                                ccGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTcc                                      <  1:4296989/101‑1 (MQ=255)
                                                                 cGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCa                                     >  1:909052/1‑101 (MQ=255)
                                                                    ggCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCAttt                                  <  1:7030524/101‑1 (MQ=255)
                                                                      cGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCAttttt                                >  1:1788477/1‑101 (MQ=255)
                                                                       gATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTg                               <  1:9416972/101‑1 (MQ=255)
                                                                       gATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTg                               <  1:3213014/101‑1 (MQ=255)
                                                                        aTTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGc                              <  1:5437632/101‑1 (MQ=255)
                                                                         ttttCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCt                             >  1:2037404/1‑101 (MQ=255)
                                                                           ttCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGt                           <  1:3999587/101‑1 (MQ=255)
                                                                            tCACCTCGGGGAAATTTTAGTTGGTGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTa                          <  1:2934820/101‑1 (MQ=255)
                                                                            tCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTa                          <  1:9675623/101‑1 (MQ=255)
                                                                              aCCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGt                        >  1:4987275/1‑101 (MQ=255)
                                                                              aCCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGt                        <  1:6890485/101‑1 (MQ=255)
                                                                                cTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCt                      >  1:2738709/1‑101 (MQ=255)
                                                                                  cGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGa                    <  1:2240570/101‑1 (MQ=255)
                                                                                   ggggAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGaa                   >  1:3077371/1‑101 (MQ=255)
                                                                                   ggggAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACAAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGaa                   >  1:8318527/1‑101 (MQ=255)
                                                                                     ggAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAgt                 >  1:2570628/1‑101 (MQ=255)
                                                                                      gAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAgtg                >  1:5169638/1‑101 (MQ=255)
                                                                                      gAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAgtg                <  1:8176493/101‑1 (MQ=255)
                                                                                       aaaTTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAgtgt               >  1:3988327/1‑101 (MQ=255)
                                                                                       aaaTTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAgtgt               <  1:6453311/101‑1 (MQ=255)
                                                                                       aaaTTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAgtgt               <  1:10704695/101‑1 (MQ=255)
                                                                                         aTTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGtta             >  1:67633/1‑101 (MQ=255)
                                                                                         aTTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGtta             >  1:10678018/1‑101 (MQ=255)
                                                                                          ttttAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGttat            >  1:7518627/1‑101 (MQ=255)
                                                                                           tttAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGttatt           >  1:3436259/1‑101 (MQ=255)
                                                                                           tttAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGttatt           <  1:7753971/101‑1 (MQ=255)
                                                                                           tttAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGttatt           <  1:4097057/101‑1 (MQ=255)
                                                                                           tttAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGttatt           <  1:5449131/101‑1 (MQ=255)
                                                                                            ttAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGttatta          <  1:8244015/101‑1 (MQ=255)
                                                                                            ttAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGttatta          <  1:1961467/101‑1 (MQ=255)
                                                                                            ttAGTTGGCGCTCTTAAAATGTGTACTTAAGAACAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGttatta          <  1:791468/101‑1 (MQ=255)
                                                                                              aGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGTTattatt        >  1:8795430/1‑101 (MQ=255)
                                                                                              aGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGTTattatt        <  1:454392/101‑1 (MQ=255)
                                                                                                 tGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGTTATTATtgtg     <  1:1353116/101‑1 (MQ=255)
                                                                                                   gCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGTTATTATTGTGAt   <  1:9877450/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
TAGTTAATAACCTTCTGGGTTTATTTTAAGGGTTAATTGTTACATTGAAATGGCTAGTTATTCCCCGGGGCGATTTTCACCTCGGGGAAATTTTAGTTGGCGTTCTTAAAATGTGTACTTAAGACCAGCAGTAGTGATGAAGTTATAGTTTTCTATACCTGCTCCATTTTTGCTGTAGTCTGAAGTGTTATTATTGTGATC  >  NC_007779/583798‑583998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.