New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3186081NA (NA)300 (1.310) 137/178 NT 98.1% coding (26/2466 nt) yqiG outer membrane usher protein
?NC_007779 3512753 = 6 (0.030)coding (529/1026 nt) cytR DNA‑binding transcriptional dual regulator

Only 100 of 729 total aligned reads displayed.

GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853
                                                                                                    |                                                                                                    
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:4557321‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:5582374‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:5746221‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:11106439‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:621840‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:6686902‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:1206076‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:1050083‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:9290103‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:9476279‑M2/1‑1 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                     >  1:7245941‑M2/100‑101 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                     >  1:11726686‑M2/100‑101 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                     >  1:2607630‑M2/100‑101 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    <  1:6880663‑M2/3‑1 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    >  1:4945947‑M2/99‑101 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    >  1:2521626‑M2/99‑101 (MQ=255)
   tAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAatt                                                                                                   >  1:4070268/1‑101 (MQ=255)
    gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatta                                                                                                  >  1:7035615‑M2/97‑101 (MQ=255)
    gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatta                                                                                                  >  1:1002319‑M2/97‑101 (MQ=255)
     aTCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAattat                                                                                                 >  1:4382834/1‑101 (MQ=255)
      gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatc                                                                                                <  1:6822597‑M2/7‑2 (MQ=255)
      gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgct                                                                                                <  1:590844‑M2/7‑5 (MQ=255)
      gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattatt                                                                                                <  1:1381548‑M2/7‑1 (MQ=255)
       cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgcta                                                                                               <  1:3110109‑M2/8‑6 (MQ=255)
         gccgccGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTaga                                                                                             >  1:985813‑M1/1‑98 (MQ=255)
          ccgccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagac                                                                                            <  1:7756660‑M1/101‑5 (MQ=255)
          ccgccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagac                                                                                            >  1:1798283‑M1/1‑97 (MQ=255)
           gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcaggaa                                                                                           <  1:76584‑M2/12‑7 (MQ=255)
           gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTatat                                                                                           <  1:4779900‑M2/12‑1 (MQ=255)
           cgccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagact                                                                                           >  1:1942176‑M1/1‑96 (MQ=255)
             gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcaggaaat                                                                                         <  1:4859780‑M2/14‑9 (MQ=255)
             gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGa                                                                                         <  1:8014213‑M2/14‑1 (MQ=255)
              ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAg                                                                                        <  1:2421535‑M2/15‑1 (MQ=255)
               gATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcc                                                                                       >  1:873205‑M1/1‑92 (MQ=255)
                 tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCaa                                                                                     <  1:286649‑M2/18‑1 (MQ=255)
                  cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAg                                                                                    <  1:7367722‑M2/19‑1 (MQ=255)
                   gTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccct                                                                                   <  1:5391998‑M1/101‑14 (MQ=255)
                    ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAggg                                                                                  >  1:4312465‑M2/81‑101 (MQ=255)
                    ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAggg                                                                                  >  1:7845832‑M2/81‑101 (MQ=255)
                            gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACg                                                                          >  1:11568735‑M2/73‑101 (MQ=255)
                             ggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACgg                                                                         >  1:6092212‑M2/72‑101 (MQ=255)
                             acgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccag                                                                         >  1:8942836‑M1/1‑78 (MQ=255)
                              gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGa                                                                        >  1:4151884‑M2/71‑101 (MQ=255)
                              cgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccaga                                                                        <  1:6363215‑M1/101‑25 (MQ=255)
                                 aTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaa                                                                     >  1:4438916‑M1/1‑74 (MQ=255)
                                     gCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaa                                                                 <  1:862881‑M1/101‑32 (MQ=255)
                                       cggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGta                                                               >  1:1494456‑M2/62‑101 (MQ=255)
                                       aCCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaata                                                               <  1:7115596‑M1/101‑34 (MQ=255)
                                        ggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGtat                                                              <  1:6557198‑M2/41‑1 (MQ=255)
                                         cGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatc                                                             <  1:11007717‑M1/101‑36 (MQ=255)
                                          cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAg                                                            >  1:11334975‑M2/59‑101 (MQ=255)
                                            gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGcc                                                          <  1:8546633‑M2/45‑1 (MQ=255)
                                            agctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcact                                                          <  1:6041202‑M1/101‑39 (MQ=255)
                                             cgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCg                                                         <  1:4673305‑M2/46‑1 (MQ=255)
                                                gcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTc                                                      >  1:3535351‑M2/53‑101 (MQ=255)
                                                    gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGa                                                  <  1:6931764‑M2/53‑1 (MQ=255)
                                                     tgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagt                                                 >  1:2028443‑M1/1‑54 (MQ=255)
                                                     taatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGaa                                                 >  1:2228958‑M2/48‑101 (MQ=255)
                                                      gCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                >  1:1427389‑M1/1‑53 (MQ=255)
                                                      aatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAag                                                <  1:10806225‑M2/55‑1 (MQ=255)
                                                      aatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAag                                                >  1:10627909‑M2/47‑101 (MQ=255)
                                                        tgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAagag                                              <  1:10955948‑M2/57‑1 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAAGGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            <  1:5103248‑M2/59‑1 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            >  1:6643223‑M2/43‑101 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            <  1:8418441‑M2/59‑1 (MQ=255)
                                                            aGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc                                          <  1:2121431‑M1/101‑55 (MQ=255)
                                                             gTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                         <  1:10225963‑M1/101‑56 (MQ=255)
                                                               tCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                       >  1:7953999‑M1/1‑44 (MQ=255)
                                                               agtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGc                                       >  1:7539316‑M2/38‑101 (MQ=255)
                                                                gtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGTCGCt                                      <  1:744131‑M2/65‑1 (MQ=255)
                                                                 tgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtg                                     >  1:8871454‑M2/36‑101 (MQ=255)
                                                                 atatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat                                     >  1:11274273‑M1/1‑42 (MQ=255)
                                                                  tatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata                                    >  1:11458154‑M1/1‑41 (MQ=255)
                                                                   atCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac                                   <  1:3182447‑M1/101‑62 (MQ=255)
                                                                    taacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTgtgt                                  >  1:1649118‑M2/33‑101 (MQ=255)
                                                                      acagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCa                                >  1:2976207‑M2/31‑101 (MQ=255)
                                                                       aCAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt                               <  1:10766260‑M1/101‑66 (MQ=255)
                                                                       aCAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt                               <  1:10341673‑M1/101‑66 (MQ=255)
                                                                        agatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACt                              >  1:9657473‑M2/29‑101 (MQ=255)
                                                                         aaTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt                             >  1:5176215‑M1/1‑34 (MQ=255)
                                                                          atgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAc                            <  1:8194749‑M2/75‑1 (MQ=255)
                                                                          atgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAc                            >  1:1872827‑M2/27‑101 (MQ=255)
                                                                           tgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAcc                           <  1:3921379‑M2/76‑1 (MQ=255)
                                                                           tgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAcc                           >  1:5654267‑M2/26‑101 (MQ=255)
                                                                            cTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                          >  1:3861600‑M1/1‑31 (MQ=255)
                                                                             tGACCGCCGCATTGGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                         <  1:10126085‑M1/101‑72 (MQ=255)
                                                                              gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                        <  1:4481033‑M1/101‑73 (MQ=255)
                                                                               tggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCt                       >  1:2700241‑M2/22‑101 (MQ=255)
                                                                                    cgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc                  >  1:2660109‑M1/1‑23 (MQ=255)
                                                                                    atataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAg                  >  1:5261797‑M2/17‑101 (MQ=255)
                                                                                     gcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagggatagtcttaatactagtttttagactagtct                 >  1:5443746‑M1/1‑22 (MQ=255)
                                                                                       taggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCt               >  1:9405980‑M2/14‑101 (MQ=255)
                                                                                       aTTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt               >  1:3339970‑M1/1‑20 (MQ=255)
                                                                                        tttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg              >  1:11183875‑M1/1‑19 (MQ=255)
                                                                                          tGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga            <  1:11420651‑M1/101‑85 (MQ=255)
                                                                                                atccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAgg      >  1:3640890‑M2/5‑101 (MQ=255)
                                                                                                atccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAgg      <  1:3442105‑M2/97‑1 (MQ=255)
                                                                                                atccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAgg      >  1:9109626‑M2/5‑101 (MQ=255)
                                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt  <  1:5843746‑M2/101‑1 (MQ=255)
                                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTAACTACCGCCTGCAAGGCTATGTTCAGGCGCt  >  1:10442011‑M2/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.