| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 3987186 = | NA (NA) | 270 (1.180) | 134/178 | NT | 100% | intergenic (‑732/‑31) | slp/insH | outer membrane lipoprotein/IS5 transposase and trans‑activator |
| ? | NC_007779 | = 4009203 | 0 (0.000) | coding (1379/1623 nt) | yhiJ | hypothetical protein | |||||
Only 100 of 733 total aligned reads displayed.
AGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACATGCT > NC_007779/4009103‑4009303 | ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAgg < 1:5023462‑M2/5‑1 (MQ=255) ccGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGga < 1:2844798‑M2/101‑3 (MQ=255) caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGta > 1:4133800‑M2/95‑101 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGtat < 1:9864304‑M2/8‑1 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGtat > 1:8617428‑M2/94‑101 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGtat > 1:1509765‑M2/94‑101 (MQ=255) gggCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaag > 1:4646994‑M2/1‑97 (MQ=255) gggCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaag > 1:10372452‑M2/1‑97 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGtata > 1:11580268‑M2/93‑101 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGtata < 1:189046‑M2/9‑1 (MQ=255) ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttaggcaaag < 1:5089530‑M2/10‑6 (MQ=255) ggCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaagg > 1:6738484‑M2/1‑96 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagagtttccccgcttattcgcaccttccTTAGGTATAAAt > 1:4577427‑M2/90‑101 (MQ=255) aTCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcg > 1:4335300‑M2/1‑92 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccttaggcaaagttaac < 1:6605987‑M2/15‑11 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCaa > 1:6119088‑M2/87‑101 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCaa > 1:9438447‑M2/87‑101 (MQ=255) ttcttGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaa > 1:7202739‑M2/2‑90 (MQ=255) tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAg > 1:5781106‑M2/86‑101 (MQ=255) tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAg < 1:5676021‑M2/16‑1 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAgtt > 1:9358539‑M2/84‑101 (MQ=255) cgcgagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccctcttattcgcaccttccTTAGGTATAAATCAAgtt > 1:9001941‑M2/84‑101 (MQ=255) ttGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaa > 1:6865308‑M2/1‑87 (MQ=255) tGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaag < 1:2381759‑M2/101‑16 (MQ=255) ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAgttgt < 1:7579454‑M2/20‑1 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAgttgtt < 1:10699884‑M2/21‑1 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGttgttg > 1:3894509‑M2/80‑101 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGcaca < 1:4237980‑M2/26‑1 (MQ=255) aaatcggctcaaacgtgaagaaatgatatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACAt < 1:10567457‑M2/27‑1 (MQ=255) cTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgat > 1:1723212‑M2/1‑78 (MQ=255) atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATaa > 1:2005657‑M2/73‑101 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAAc < 1:6946043‑M2/30‑1 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAAc > 1:11466330‑M2/72‑101 (MQ=255) cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACg < 1:9596846‑M2/31‑1 (MQ=255) ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACgg > 1:2661692‑M2/70‑101 (MQ=255) ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACgg < 1:3084250‑M2/32‑1 (MQ=255) aaTCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatga < 1:7619671‑M2/101‑28 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGa > 1:5623453‑M2/69‑101 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGa > 1:8896887‑M2/69‑101 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGa > 1:7941494‑M2/69‑101 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttagtcgcaccttccTTAGGTATAGATCAAGTTGTTGCGCATAACGGa > 1:10621454‑M2/69‑101 (MQ=255) tCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgaga < 1:809937‑M2/101‑30 (MQ=255) cGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagat < 1:7031575‑M2/101‑31 (MQ=255) catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAAtggtg < 1:7849088‑M2/40‑1 (MQ=255) tttCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgttt > 1:160821‑M2/1‑64 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGaa < 1:5282694‑M2/43‑1 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGaa < 1:278055‑M2/43‑1 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGaa > 1:2320816‑M2/59‑101 (MQ=255) tGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtca < 1:8692139‑M2/101‑42 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAagag < 1:1214809‑M2/46‑1 (MQ=255) tttCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTACGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc < 1:4000524‑M2/101‑44 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGaa > 1:2195406‑M2/54‑101 (MQ=255) ttCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 1:7123204‑M2/1‑57 (MQ=255) tCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg < 1:11272865‑M2/101‑46 (MQ=255) cGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 1:10027021‑M2/101‑47 (MQ=255) gACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga > 1:3380934‑M2/1‑54 (MQ=255) gactgagtcagccgagaagaatttcccctcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAgg < 1:4435307‑M2/56‑1 (MQ=255) gactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAgg < 1:3205296‑M2/56‑1 (MQ=255) gATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca < 1:8263491‑M2/101‑52 (MQ=255) actgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGc > 1:9686019‑M2/45‑101 (MQ=255) ttACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata > 1:6519060‑M2/1‑48 (MQ=255) ctgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCg < 1:7760404‑M2/58‑1 (MQ=255) tACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag > 1:8202596‑M2/1‑47 (MQ=255) aCAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:1766829‑M2/101‑56 (MQ=255) cAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 1:6268339‑M2/101‑57 (MQ=255) cAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 1:5555578‑M2/101‑57 (MQ=255) gtcagccgagaagaatttccgcgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAAc < 1:8446801‑M2/62‑1 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACg < 1:3455967‑M2/63‑1 (MQ=255) gACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 1:5403766‑M2/1‑43 (MQ=255) cagccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACgg > 1:10959809‑M2/38‑101 (MQ=255) aCCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag < 1:9112018‑M2/101‑60 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACggg > 1:327937‑M2/37‑101 (MQ=255) tAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt < 1:1409757‑M2/101‑63 (MQ=255) tGAAGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca > 1:6454956‑M2/1‑33 (MQ=255) aatttccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTa < 1:2086218‑M2/75‑1 (MQ=255) aaGCACTATTAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg < 1:4781407‑M2/101‑71 (MQ=255) ccccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCt < 1:8526601‑M2/80‑1 (MQ=255) ccgcttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTa < 1:10880088‑M2/82‑1 (MQ=255) tAGCATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa > 1:7340163‑M2/1‑22 (MQ=255) cttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACg < 1:59983‑M2/85‑1 (MQ=255) cttattcgcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACg > 1:10242540‑M2/17‑101 (MQ=255) cATGTTCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt < 1:1114278‑M2/101‑83 (MQ=255) ttCACAAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct < 1:7487290‑M2/101‑87 (MQ=255) gcaccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGa < 1:11726114‑M2/92‑1 (MQ=255) cacaAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc < 1:3843917‑M2/101‑89 (MQ=255) acaAATGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg < 1:3555682‑M2/101‑90 (MQ=255) ccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAg > 1:11363739‑M2/7‑101 (MQ=255) ccttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAg < 1:4986534‑M2/95‑1 (MQ=255) ttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTa > 1:9260170‑M2/5‑101 (MQ=255) ttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTa > 1:8331475‑M2/5‑101 (MQ=255) ttccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTa > 1:2970389‑M2/5‑101 (MQ=255) aTGTTAGGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga > 1:8802739‑M2/1‑8 (MQ=255) ccTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTaaa < 1:11663041‑M2/99‑1 (MQ=255) ttAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACa < 1:3693046/101‑1 (MQ=255) gggaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa > 1:2479599‑M2/1‑1 (MQ=255) ggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa > 1:1323002‑M2/1‑1 (MQ=255) ggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 1:6350686‑M2/101‑101 (MQ=255) ggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 1:3944103‑M2/101‑101 (MQ=255) ggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 1:10476683‑M2/101‑101 (MQ=255) ggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 1:5198590‑M2/101‑101 (MQ=255) | AGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACATGCT > NC_007779/4009103‑4009303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |