| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_007779 | 3,746,911 | Δ1,199 bp | 100% | insH | insH | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_007779 | 3746911–3748109 | 3748109 | 1–1199 | 272 [0] | [0] 273 | insH | insH |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 3746910 | 0 (0.000) | 232 (1.060) | 129/172 | NT | 100% | intergenic (‑508/‑69) | mdtL/insH | multidrug efflux system protein/IS5 element protein |
| ? | NC_007779 | 3748110 = | 0 (0.000) | intergenic (+151/+961) | insH/tnaA | IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent | |||||
Only 100 of 273 total aligned reads displayed.
TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTA > NC_007779/3748011‑3748210 | aacgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagag > 1:10610164‑M2/100‑101 (MQ=255)aacgcccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagag < 1:1250296‑M2/2‑1 (MQ=255) cccgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAaca < 1:5069215‑M2/6‑1 (MQ=255) cgccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACAcc > 1:11055587‑M2/94‑101 (MQ=255) gccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca < 1:785210‑M2/9‑1 (MQ=255) gccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca > 1:4540654‑M2/93‑101 (MQ=255) ccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcag > 1:2470284‑M2/92‑101 (MQ=255) ccgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcag > 1:2535043‑M2/92‑101 (MQ=255) cgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagc < 1:10315391‑M2/11‑1 (MQ=255) cgtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagc < 1:8253913‑M2/11‑1 (MQ=255) gtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagca > 1:234338‑M2/90‑101 (MQ=255) gtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagca > 1:9218122‑M2/90‑101 (MQ=255) gtgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagca > 1:9058081‑M2/90‑101 (MQ=255) tgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagcag > 1:4921929‑M2/89‑101 (MQ=255) tgggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagcag > 1:985258‑M2/89‑101 (MQ=255) ggagttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGc < 1:10392171‑M2/15‑1 (MQ=255) gttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaa < 1:177553‑M2/18‑1 (MQ=255) ttatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaaa > 1:4857401‑M2/83‑101 (MQ=255) tatcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAAc > 1:9690803‑M2/82‑101 (MQ=255) tcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc > 1:4628260‑M2/80‑101 (MQ=255) tcaatcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc > 1:9519903‑M2/80‑101 (MQ=255) caatcttaaacaggtccgccagataatcgaacacccccagcgtgacaccaaaggacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCg > 1:3985401‑M2/79‑101 (MQ=255) tcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATa < 1:7969613‑M2/26‑1 (MQ=255) tcttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATa < 1:4264553‑M2/26‑1 (MQ=255) cttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATaa > 1:6985194‑M2/75‑101 (MQ=255) cttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGAAGGCAAAACTCGATaa > 1:148652‑M2/75‑101 (MQ=255) ttaaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAAt > 1:8690138‑M2/74‑101 (MQ=255) taaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg < 1:5225959‑M2/29‑1 (MQ=255) taaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg > 1:447861‑M2/73‑101 (MQ=255) taaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATg < 1:2286494‑M2/29‑1 (MQ=255) aaacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGc < 1:9421991‑M2/30‑1 (MQ=255) aacaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc < 1:10727311‑M2/31‑1 (MQ=255) caggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGt > 1:2666997‑M2/69‑101 (MQ=255) caggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGt < 1:5294332‑M2/33‑1 (MQ=255) gtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCt > 1:1418594‑M2/66‑101 (MQ=255) tccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTg > 1:3824682‑M2/65‑101 (MQ=255) ccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt > 1:5652769‑M2/64‑101 (MQ=255) cgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGtt > 1:725572‑M2/63‑101 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGttt > 1:11296882‑M2/62‑101 (MQ=255) ccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTg < 1:4418855‑M2/41‑1 (MQ=255) ccagataatcgaacaaccccagcgtgacaacaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTg > 1:3801465‑M2/61‑101 (MQ=255) agataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt < 1:9619059‑M2/43‑1 (MQ=255) ataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGc < 1:11412055‑M2/45‑1 (MQ=255) ataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGc > 1:5436991‑M2/57‑101 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCg < 1:10011820‑M2/47‑1 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCg < 1:1828742‑M2/47‑1 (MQ=255) atcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGa > 1:3151398‑M2/54‑101 (MQ=255) acaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAAc < 1:2783722‑M2/53‑1 (MQ=255) acaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAAc < 1:6844970‑M2/53‑1 (MQ=255) acaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAAc > 1:6328013‑M2/49‑101 (MQ=255) caaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACg < 1:1927660‑M2/54‑1 (MQ=255) caaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACg < 1:7416410‑M2/54‑1 (MQ=255) caaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACg < 1:6224362‑M2/54‑1 (MQ=255) accccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAt < 1:5725623‑M2/56‑1 (MQ=255) ccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAtt < 1:2042164‑M2/57‑1 (MQ=255) ccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAtt > 1:7093834‑M2/45‑101 (MQ=255) cccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAttt < 1:7646063‑M2/58‑1 (MQ=255) ccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTc < 1:2953848‑M2/59‑1 (MQ=255) cagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCa > 1:7460002‑M2/42‑101 (MQ=255) cagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCa < 1:3864295‑M2/60‑1 (MQ=255) cagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCa < 1:8317509‑M2/60‑1 (MQ=255) agcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAc > 1:5789635‑M2/41‑101 (MQ=255) agcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAc < 1:8980870‑M2/61‑1 (MQ=255) gcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAcc < 1:7180930‑M2/62‑1 (MQ=255) cgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCa > 1:580075‑M2/39‑101 (MQ=255) cgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCa > 1:10055376‑M2/39‑101 (MQ=255) cgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCa < 1:6497457‑M2/63‑1 (MQ=255) gtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAg < 1:3489425‑M2/64‑1 (MQ=255) gtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAg > 1:1089992‑M2/38‑101 (MQ=255) acaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGa > 1:7145344‑M2/35‑101 (MQ=255) caccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGaa > 1:4695186‑M2/34‑101 (MQ=255) accaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAt > 1:3907510‑M2/33‑101 (MQ=255) accaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTAACCAGAGAAt > 1:4813797‑M2/33‑101 (MQ=255) ccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATc > 1:8553757‑M2/32‑101 (MQ=255) aaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCaa < 1:9467105‑M2/72‑1 (MQ=255) aagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAAc > 1:8134537‑M2/29‑101 (MQ=255) agaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACg < 1:4110244‑M2/74‑1 (MQ=255) agaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACg > 1:9235245‑M2/28‑101 (MQ=255) agaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACg < 1:2865092‑M2/74‑1 (MQ=255) cgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgc < 1:5541755‑M2/78‑1 (MQ=255) gaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgcc < 1:1331012‑M2/79‑1 (MQ=255) gaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTgcc > 1:2145749‑M2/23‑101 (MQ=255) tggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCt > 1:3244698‑M2/19‑101 (MQ=255) caacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgag < 1:4901925‑M2/86‑1 (MQ=255) aacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTTACCAGCGAATCAACGTTGCCGCCTgagg > 1:8867016‑M2/15‑101 (MQ=255) aacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagg < 1:336201‑M2/87‑1 (MQ=255) aacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgagg > 1:11709409‑M2/15‑101 (MQ=255) cagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTgaggag > 1:7374579‑M2/13‑101 (MQ=255) gctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGAt > 1:6243214‑M2/11‑101 (MQ=255) gctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGAt > 1:3084775‑M2/11‑101 (MQ=255) taagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATaa > 1:601182‑M2/9‑101 (MQ=255) taagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATaa < 1:10519589‑M2/93‑1 (MQ=255) agttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATc > 1:152480‑M2/7‑101 (MQ=255) gttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCCCCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCg < 1:3169769‑M2/96‑1 (MQ=255) ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGc > 1:6572683‑M2/5‑101 (MQ=255) ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGc < 1:8186132‑M2/97‑1 (MQ=255) tagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGcc > 1:5654983‑M2/4‑101 (MQ=255) tagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGcc > 1:7982591‑M2/4‑101 (MQ=255) agAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCt > 1:5163150‑M2/3‑101 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTa > 1:3524016/1‑101 (MQ=255) | TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCAACGTTGCCGCCTGAGGAGATAATCGCCTTA > NC_007779/3748011‑3748210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |