New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 2411458 =NA (NA)220 (0.930) 119/180 NT 96.9% intergenic (‑147/+15) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein
?NC_007779 = 2985055 7 (0.030)coding (553/1230 nt) yqeG transporter

Only 100 of 269 total aligned reads displayed.

ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/2411557‑2411458
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCATTAC  <  NC_007779/2985055‑2984956
                                                                                                                                                                                                        
ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCC                                                                                                     <  1:10940432/101‑1
  GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCag                                                                                                   <  1:1106734/101‑3
   GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgct                                                                                                  <  1:1865454/101‑4
   GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgct                                                                                                  <  1:11676603/101‑4
   GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgct                                                                                                  <  1:3922880/101‑4
   GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTAC                                                                                                  >  1:18270/1‑101
   GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTAC                                                                                                  >  1:5958429/1‑101
    AAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACC                                                                                                 >  1:10839521/1‑101
     AGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCT                                                                                                <  1:4689337/101‑1
     AGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCT                                                                                                <  1:4394590/101‑1
      GTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgctatt                                                                                               <  1:581087/101‑7
      GTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTG                                                                                               <  1:1089312/101‑1
      GTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCAATACCCgctatt                                                                                               <  1:8630299/101‑7
       TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGG                                                                                              <  1:2448579/101‑1
       TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGG                                                                                              >  1:1023799/1‑101
        CGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgctattgc                                                                                             <  1:8909978/101‑9
         GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgctattgca                                                                                            >  1:4157054/1‑92
         GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgctattgca                                                                                            <  1:9606937/101‑10
         GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGT                                                                                            <  1:9450579/101‑1
            GTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGT                                                                                         >  1:5652869/1‑101
            GTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGT                                                                                         <  1:1691393/101‑1
             TCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTT                                                                                        <  1:11494573/101‑1
               GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAA                                                                                      >  1:212199/1‑101
                TTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAAT                                                                                     <  1:2788290/101‑1
                  CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAG                                                                                   >  1:1210573/1‑101
                    CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGAT                                                                                 <  1:1358377/101‑1
                      AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCA                                                                               >  1:3051474/1‑101
                       AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAG                                                                              >  1:7565089/1‑101
                       AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAG                                                                              <  1:6551714/101‑1
                        ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGG                                                                             <  1:691/101‑1
                        ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGG                                                                             >  1:131094/1‑101
                         TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGT                                                                            <  1:8069987/101‑1
                             TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCC                                                                        >  1:7347427/1‑101
                                AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAAC                                                                     >  1:2191081/1‑101
                                   TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTAC                                                                  >  1:1664577/1‑101
                                   TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTAC                                                                  <  1:10755549/101‑1
                                    GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACC                                                                 >  1:10340305/1‑101
                                      ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGA                                                               <  1:1116079/101‑1
                                      ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGA                                                               <  1:4653688/101‑1
                                       TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGAC                                                              <  1:7706868/101‑1
                                       TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGAC                                                              <  1:1395152/101‑1
                                        GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACA                                                             <  1:8232168/101‑1
                                             AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTA                                                        >  1:8122629/1‑101
                                             AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTA                                                        <  1:1196844/101‑1
                                              GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAA                                                       >  1:7888131/1‑101
                                              GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAA                                                       <  1:9798627/101‑1
                                                 ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATG                                                    <  1:4078185/101‑1
                                                 ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATG                                                    <  1:5139268/101‑1
                                                   CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGA                                                  >  1:8610265/1‑101
                                                    GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAA                                                 >  1:5640116/1‑101
                                                    GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAA                                                 >  1:11600843/1‑101
                                                    GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAA                                                 <  1:5845843/101‑1
                                                     GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAA                                                >  1:2748162/1‑101
                                                     GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAA                                                <  1:682690/101‑1
                                                      GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAG                                               >  1:11304205/1‑101
                                                      GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAG                                               >  1:8153320/1‑101
                                                        ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAA                                             <  1:10425686/101‑1
                                                        ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAA                                             >  1:10015312/1‑101
                                                        ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAA                                             <  1:11171186/101‑1
                                                        ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAA                                             >  1:879009/1‑101
                                                        ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAA                                             >  1:9012909/1‑101
                                                         TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAA                                            >  1:4816923/1‑101
                                                         TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAA                                            <  1:192958/101‑1
                                                          TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAAT                                           >  1:224032/1‑101
                                                           ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATA                                          >  1:7784229/1‑101
                                                            TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAA                                         <  1:3653755/101‑1
                                                             CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAG                                        >  1:6042377/1‑101
                                                               GAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAA                                      >  1:5397430/1‑101
                                                                AACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAA                                     <  1:9111974/101‑1
                                                                 ACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGACCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAAT                                    <  1:7470223/101‑1
                                                                  CATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATA                                   <  1:9925718/101‑1
                                                                  CATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATA                                   >  1:2480179/1‑101
                                                                   ATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAG                                  >  1:10134297/1‑101
                                                                     AAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGC                                >  1:3184402/1‑101
                                                                       AACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAA                              <  1:9248201/101‑1
                                                                        ACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAAT                             >  1:5305116/1‑101
                                                                         CACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTACATGGAAAGAAATAAGAAATAGGCAATC                            >  1:4464704/1‑101
                                                                         CACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATC                            >  1:5576276/1‑101
                                                                          ACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCA                           <  1:8721428/101‑1
                                                                           CTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAA                          >  1:11793342/1‑101
                                                                           CTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAA                          >  1:7630061/1‑101
                                                                            TATCAATAAGTTGGAGTCATTACCCTACCTGTGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAAT                         <  1:61181/101‑1
                                                                            TATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGTAATAAGAAATAGGCAATCAAT                         <  1:10932578/101‑1
                                                                            TATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAAT                         <  1:3465441/101‑1
                                                                            TATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAAT                         <  1:3932591/101‑1
                                                                             ATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATG                        <  1:4171950/101‑1
                                                                             ATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATG                        >  1:7834890/1‑101
                                                                              TCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGG                       <  1:1506741/101‑1
                                                                                AATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGA                     <  1:4320074/101‑1
                                                                                   AAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATA                  >  1:7814963/1‑101
                                                                                   AAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATA                  >  1:54536/1‑101
                                                                                      TTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCA               >  1:1717534/1‑101
                                                                                       TGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAA              >  1:6256220/1‑101
                                                                                           GTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAAT          <  1:7121812/101‑1
                                                                                            TCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATC         >  1:4536418/1‑101
                                                                                             CATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCC        <  1:9650506/101‑1
                                                                                               TTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCA      <  1:10307312/101‑1
                                                                                                TACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCAT     <  1:3246670/101‑1
                                                                                                  CCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCATTA   <  1:2165272/101‑1
                                                                                                   CCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCATTAC  >  1:2647219/1‑101
                                                                                                                                                                                                        
ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/2411557‑2411458
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCATTAC  <  NC_007779/2985055‑2984956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.