| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 1397758 = | NA (NA) | 197 (0.840) | 109/180 | NT | 100% | intergenic (‑122/‑32) | ynaI/insH | inner membrane protein/IS5 transposase and trans‑activator |
| ? | NC_007779 | 1672777 = | 0 (0.000) | intergenic (+111/‑313) | ynfM/asr | transporter/acid shock‑inducible periplasmic protein | |||||
Only 100 of 445 total aligned reads displayed.
CGGACTGCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAAGTAGTAA > NC_007779/1672677‑1672877 | ggACTGCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCt < 1:4752889/101‑1 (MQ=255) ggACTGCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCt < 1:10353464/101‑1 (MQ=255) cTGCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGg < 1:5201838‑M1/101‑2 (MQ=255) gCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGgga < 1:10591293‑M1/101‑4 (MQ=255) cGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaa > 1:5855199‑M1/1‑97 (MQ=255) cGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaa > 1:4111862‑M1/1‑97 (MQ=255) tAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggt < 1:10739297‑M1/101‑8 (MQ=255) tAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggt > 1:10004499‑M1/1‑94 (MQ=255) aaaTACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtg > 1:4646526‑M1/1‑93 (MQ=255) aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAgg < 1:7404109‑M2/14‑1 (MQ=255) aTACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcg > 1:8280506‑M1/1‑91 (MQ=255) gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGAt > 1:4826980‑M2/86‑101 (MQ=255) aCCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaa > 1:8409800‑M1/1‑89 (MQ=255) aCCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaa > 1:7984350‑M1/1‑89 (MQ=255) taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGAtt < 1:9562355‑M2/17‑1 (MQ=255) ccGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaata < 1:7775309‑M1/101‑15 (MQ=255) agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATtat < 1:8734666‑M2/19‑1 (MQ=255) gTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataag < 1:5289524‑M1/101‑17 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGt < 1:9074664‑M2/23‑1 (MQ=255) ggACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggg < 1:5412675‑M1/101‑21 (MQ=255) gACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcgggg < 1:4540186‑M1/101‑22 (MQ=255) aCTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcgggga > 1:284320‑M1/1‑79 (MQ=255) cTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaa < 1:3574981‑M1/101‑24 (MQ=255) actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTAccc < 1:7336521‑M2/27‑1 (MQ=255) ttATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCACTTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaa > 1:6773136‑M1/1‑77 (MQ=255) ttATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaa < 1:4382479‑M1/101‑25 (MQ=255) ttATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaa > 1:859612‑M1/1‑77 (MQ=255) ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCa < 1:636194‑M2/28‑1 (MQ=255) ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCa < 1:4469083‑M2/28‑1 (MQ=255) aTTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaatt > 1:1797836‑M1/1‑75 (MQ=255) ttGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattc < 1:4246547‑M1/101‑28 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttctcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATa > 1:10072277‑M2/70‑101 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATa < 1:980785‑M2/32‑1 (MQ=255) gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATaa < 1:2212017‑M2/33‑1 (MQ=255) cAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttct < 1:5723888‑M1/101‑32 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACgg > 1:607623‑M2/65‑101 (MQ=255) tCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggc > 1:5962190‑M1/1‑66 (MQ=255) cAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggat < 1:5115617‑M1/101‑37 (MQ=255) ctgttctatggctccagatgacaaacatgatctcatatcaggggcttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTc < 1:2435503‑M2/41‑1 (MQ=255) aaaCCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctg > 1:10953554‑M1/1‑64 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCAt > 1:10420320‑M2/59‑101 (MQ=255) ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCAtt < 1:7888097‑M2/44‑1 (MQ=255) aaCGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactca > 1:2819184‑M1/1‑59 (MQ=255) aaCGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactca > 1:8071299‑M1/1‑59 (MQ=255) cGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt > 1:238962‑M1/1‑57 (MQ=255) cGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagt > 1:1557503‑M1/1‑57 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCt < 1:1055650‑M2/49‑1 (MQ=255) gTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc < 1:8966041‑M1/101‑46 (MQ=255) gTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc < 1:2543972‑M1/101‑46 (MQ=255) ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCtg > 1:2467630‑M2/52‑101 (MQ=255) gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCtgt < 1:11841764‑M2/51‑1 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCtgtg > 1:3480654‑M2/50‑101 (MQ=255) aaTAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt > 1:753214‑M1/1‑53 (MQ=255) aTAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt > 1:6460160‑M1/1‑52 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgccccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTgtgtgt < 1:3832218‑M2/55‑1 (MQ=255) aGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca < 1:5544270‑M1/101‑52 (MQ=255) gCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat > 1:2608335‑M1/1‑49 (MQ=255) gCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat < 1:11852733‑M1/101‑53 (MQ=255) gCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat < 1:11004506‑M1/101‑53 (MQ=255) agatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTc > 1:9904446‑M2/46‑101 (MQ=255) ccATCCTAAAATAGGCGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt > 1:2729278‑M1/1‑48 (MQ=255) ccATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt > 1:11673622‑M1/1‑48 (MQ=255) cATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt > 1:4990594‑M1/1‑47 (MQ=255) aTCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc > 1:5590824‑M1/1‑46 (MQ=255) aTCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc > 1:7623524‑M1/1‑46 (MQ=255) gacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCAttt < 1:3292635‑M2/60‑1 (MQ=255) cTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc < 1:1251167‑M1/101‑59 (MQ=255) aaaaTAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat > 1:4327167‑M1/1‑41 (MQ=255) acatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTAc < 1:6688928‑M2/65‑1 (MQ=255) aaaTAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg < 1:1668802‑M1/101‑62 (MQ=255) tgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGa > 1:10203857‑M2/34‑101 (MQ=255) tgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGa > 1:4424495‑M2/34‑101 (MQ=255) tAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt < 1:9763746‑M1/101‑65 (MQ=255) aGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg < 1:3145294‑M1/101‑66 (MQ=255) gACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga < 1:3189443‑M1/101‑67 (MQ=255) gACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga < 1:7689628‑M1/101‑67 (MQ=255) atctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATg > 1:9206286‑M2/32‑101 (MQ=255) cGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc > 1:6266294‑M1/1‑33 (MQ=255) tcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATgcgc > 1:10876494‑M2/29‑101 (MQ=255) aGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga < 1:602827‑M1/101‑72 (MQ=255) atcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCTCAGtt < 1:7084874‑M2/77‑1 (MQ=255) atcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGtt < 1:726922‑M2/77‑1 (MQ=255) atcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGtt > 1:11157557‑M2/25‑101 (MQ=255) gccagccaATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt > 1:6632358‑M1/1‑27 (MQ=255) cagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTAt < 1:3900489‑M2/79‑1 (MQ=255) cagccaATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt > 1:11233806‑M1/1‑25 (MQ=255) cagccaATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt > 1:364066‑M1/1‑25 (MQ=255) gacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGGTGTGTGTCATTTATTACTGATGCGCAGTTATTCTa > 1:1153853‑M2/19‑101 (MQ=255) gacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTa > 1:11405368‑M2/19‑101 (MQ=255) gacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTa < 1:1427835‑M2/83‑1 (MQ=255) gacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTa < 1:8810450‑M2/83‑1 (MQ=255) acttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTAc > 1:9284738‑M2/18‑101 (MQ=255) aTTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc < 1:7196203‑M1/101‑83 (MQ=255) ttCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg < 1:1990243‑M1/101‑84 (MQ=255) gttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCt < 1:2958539‑M2/88‑1 (MQ=255) caccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTa < 1:2090232‑M2/93‑1 (MQ=255) caccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTa < 1:11702314‑M2/93‑1 (MQ=255) accttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTaa < 1:11304093‑M2/94‑1 (MQ=255) ccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAagtagt < 1:6880339‑M2/99‑1 (MQ=255) cCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAAgtagta > 1:7009327‑M2/2‑101 (MQ=255) | CGGACTGCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAAGTAGTAA > NC_007779/1672677‑1672877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |