BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 400327	207 (0.880)	3 (0.010)	3/172	NT	1.5%	intergenic (‑180/‑283)	ddlA/yaiB	D‑alanine‑D‑alanine ligase A/hypothetical protein
*	?	NC_007779	= 575008	NA (NA)	3 (0.010)	3/172	NT	1.5%	intergenic (‑32/‑1613)	insH/essD	IS5 transposase and trans‑activator/phage lysis protein

Only 100 of 230 total aligned reads displayed.

GTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTATAATAAAGGTTG  >  NC_007779/400227‑400427

 ttgCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAAt                                                                                                     >  1:6449475/1‑101 (MQ=255)

        cttctGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTcc                                                                                              >  1:5502950/1‑101 (MQ=255)

          tctGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTg                                                                                            >  1:8918304/1‑101 (MQ=255)

          tctGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTg                                                                                            <  1:11449156/101‑1 (MQ=255)

          tctGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGACGAACGGGAAGCTAATTTATTCCTg                                                                                            <  1:10076927/101‑1 (MQ=255)

             gctgACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCt                                                                                         <  1:2143235/101‑1 (MQ=255)

             gctgACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCt                                                                                         <  1:4517912/101‑1 (MQ=255)

                    aaGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATgg                                                                                  >  1:7410153/1‑101 (MQ=255)

                       cGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCa                                                                               >  1:3017009/1‑101 (MQ=255)

                       cGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCa                                                                               <  1:6198811/101‑1 (MQ=255)

                        gTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCAt                                                                              <  1:5764586/101‑1 (MQ=255)

                        gTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCAt                                                                              <  1:6644935/101‑1 (MQ=255)

                        gTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCAt                                                                              >  1:7240484/1‑101 (MQ=255)

                          gCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGc                                                                            >  1:5399188/1‑101 (MQ=255)

                           cAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCg                                                                           >  1:5365054/1‑101 (MQ=255)

                           cAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCg                                                                           <  1:3770481/101‑1 (MQ=255)

                            aaCGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCgg                                                                          <  1:9829170/101‑1 (MQ=255)

                            aaCGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCgg                                                                          >  1:7045512/1‑101 (MQ=255)

                             aCGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGt                                                                         >  1:9420878/1‑101 (MQ=255)

                             aCGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGt                                                                         <  1:9180389/101‑1 (MQ=255)

                             aCGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGt                                                                         >  1:10528568/1‑101 (MQ=255)

                              cGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTg                                                                        <  1:10786785/101‑1 (MQ=255)

                               gTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGa                                                                       <  1:11520164/101‑1 (MQ=255)

                               gTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGa                                                                       <  1:6230999/101‑1 (MQ=255)

                                  cTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGtt                                                                    >  1:7111078/1‑101 (MQ=255)

                                  cTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGtt                                                                    <  1:8657339/101‑1 (MQ=255)

                                   tGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGttt                                                                   <  1:10448645/101‑1 (MQ=255)

                                    ggTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGtttt                                                                  >  1:1433316/1‑101 (MQ=255)

                                       gaagaaAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGttttttt                                                               <  1:9936815/101‑1 (MQ=255)

                                       gaagaaAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGttttttt                                                               >  1:9449015/1‑101 (MQ=255)

                                        aagaaAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTtc                                                              >  1:1618471/1‑101 (MQ=255)

                                            aaGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCtt                                                          <  1:25263/101‑1 (MQ=255)

                                            aaGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCtt                                                          <  1:2363907/101‑1 (MQ=255)

                                             aGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTa                                                         <  1:5025996/101‑1 (MQ=255)

                                               tGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAAt                                                       <  1:4474852/101‑1 (MQ=255)

                                               tGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAAt                                                       >  1:1885258/1‑101 (MQ=255)

                                               tGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAAt                                                       >  1:3678781/1‑101 (MQ=255)

                                                gCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAAtt                                                      <  1:11069033/101‑1 (MQ=255)

                                                 cGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATta                                                     <  1:9746436/101‑1 (MQ=255)

                                                 cGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATta                                                     <  1:7791616/101‑1 (MQ=255)

                                                 cGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATta                                                     >  1:3221206/1‑101 (MQ=255)

                                                 cGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATta                                                     >  1:6953448/1‑101 (MQ=255)

                                                  gTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATtat                                                    >  1:10912302/1‑101 (MQ=255)

                                                   ttATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATtata                                                   <  1:2867596/101‑1 (MQ=255)

                                                     aTCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAg                                                 <  1:2229213/101‑1 (MQ=255)

                                                      tctcAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGt                                                >  1:2775077/1‑101 (MQ=255)

                                                       ctcAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGtt                                               >  1:9865921/1‑101 (MQ=255)

                                                       ctcAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGtt                                               <  1:6613032/101‑1 (MQ=255)

                                                       ctcAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGtt                                               >  1:11722662/1‑101 (MQ=255)

                                                       ctcAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGtt                                               >  1:3646877/1‑101 (MQ=255)

                                                       ctcAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGtt                                               <  1:2506763/101‑1 (MQ=255)

                                                         cAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTaa                                             <  1:8531379/101‑1 (MQ=255)

                                                           aaGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACg                                           <  1:4951273/101‑1 (MQ=255)

                                                            aGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGa                                          <  1:9661463/101‑1 (MQ=255)

                                                            aGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGACCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGa                                          >  1:5408642/1‑101 (MQ=255)

                                                             gATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGaa                                         <  1:4850004/101‑1 (MQ=255)

                                                              aTGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAag                                        <  1:1427563/101‑1 (MQ=255)

                                                               tgtgCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAaga                                       <  1:1339590/101‑1 (MQ=255)

                                                                 cgcgcAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAgaga                                     <  1:8040343/100‑1 (MQ=255)

                                                                  gcgcAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGaa                                    <  1:5270304/101‑1 (MQ=255)

                                                                   cgcAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAat                                   <  1:5642643/101‑1 (MQ=255)

                                                                     cAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAatat                                 <  1:9731218/101‑1 (MQ=255)

                                                                     cAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAatat                                 <  1:9371519/101‑1 (MQ=255)

                                                                       aGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAatatat                               <  1:3052447/101‑1 (MQ=255)

                                                                        gATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATAtt                              <  1:9198572/101‑1 (MQ=255)

                                                                         aTCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATAttt                             <  1:6737777/101‑1 (MQ=255)

                                                                          tCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTc                            <  1:4294154/101‑1 (MQ=255)

                                                                          tCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTc                            <  1:8317473/101‑1 (MQ=255)

                                                                            acaAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCAt                          <  1:5202625/101‑1 (MQ=255)

                                                                             caAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATa                         <  1:4689169/101‑1 (MQ=255)

                                                                              aaaaaTGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATaa                        <  1:9591894/101‑1 (MQ=255)

                                                                                aaaTGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACt                      >  1:11281913/1‑101 (MQ=255)

                                                                                 aaTGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACtt                     <  1:10113988/101‑1 (MQ=255)

                                                                                  atgatgAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACttt                    <  1:10029594/101‑1 (MQ=255)

                                                                                  atgatgAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACttt                    <  1:7560834/101‑1 (MQ=255)

                                                                                   tgatgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTTATAAAtttt                   >  1:11301192/1‑101 (MQ=255)

                                                                                   tgatgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACtttt                   >  1:5844936/1‑101 (MQ=255)

                                                                                   tgatgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACtttt                   <  1:6844064/101‑1 (MQ=255)

                                                                                   tgatgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACtttt                   <  1:4363269/101‑1 (MQ=255)

                                                                                    gatgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTttta                  <  1:8644103/101‑1 (MQ=255)

                                                                                    gatgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTttta                  <  1:8711784/101‑1 (MQ=255)

                                                                                     atgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTtttat                 <  1:355024/101‑1 (MQ=255)

                                                                                     atgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTtttat                 <  1:1538091/101‑1 (MQ=255)

                                                                                      tgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTtttatt                <  1:9266363/101‑1 (MQ=255)

                                                                                      tgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTtttatt                <  1:812920/101‑1 (MQ=255)

                                                                                      tgaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTtttatt                >  1:3373664/1‑101 (MQ=255)

                                                                                       gaACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTtttattt               >  1:5650283/1‑101 (MQ=255)

                                                                                        aaCGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTtttattta              <  1:10166184/101‑1 (MQ=255)

                                                                                        aaCGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGCTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTtttattta              >  1:7426473/1‑101 (MQ=255)

                                                                                         aCGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTttatttat             >  1:10858174/1‑101 (MQ=255)

                                                                                          cGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTtata            <  1:8850659/101‑1 (MQ=255)

                                                                                           gggAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTataa           >  1:7388126/1‑101 (MQ=255)

                                                                                           gggAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTataa           >  1:5587251/1‑101 (MQ=255)

                                                                                            ggAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTataat          <  1:11773712/101‑1 (MQ=255)

                                                                                              aaGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTAtaataa        <  1:899917/101‑1 (MQ=255)

                                                                                                gCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTATAATAAAg      <  1:7727521/101‑1 (MQ=255)

                                                                                                 cTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTATAATAAAgg     <  1:5107386/101‑1 (MQ=255)

                                                                                                   aaTTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTATAATAAAGGtt   >  1:11681224/1‑101 (MQ=255)

                                                                                                   aaTTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTATAATAAAGGtt   <  1:10618230/101‑1 (MQ=255)

                                                                                                   aaTTGATTCCTAGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTATAATAAAGGtt   >  1:11041408/1‑101 (MQ=255)

GTTGCAATCTTCTGCTGACAAAGCGTGCAACGTACTGGTGAAGAAAGTGCGTTATCTCAAAGATGTGCGCAAGATCACAAAAATGATGAACGGGAAGCTAATTTATTCCTGGCTTAAATGGCCATGCGGTGAGTTTTTTTCTCTTAATTATAAGTTAACGAAGAGAATATATTTCATAACTTTTATTTATAATAAAGGTTG  >  NC_007779/400227‑400427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.