New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3186081NA (NA)258 (1.110) 140/178 NT 98.1% coding (26/2466 nt) yqiG outer membrane usher protein
?NC_007779 3512753 = 5 (0.020)coding (529/1026 nt) cytR DNA‑binding transcriptional dual regulator

Only 100 of 702 total aligned reads displayed.

GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853
                                                                                                    |                                                                                                    
gcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatatagggcaaatcca                                                                                                      <  1:10731591‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:404744‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:10269694‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:9597219‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:9504243‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:2319212‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:9036925‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:8983870‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:11179013‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:1859897‑M2/101‑101 (MQ=255)
 cGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTaaa                                                                                                     <  1:2204857/101‑1 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                     >  1:7227020‑M2/100‑101 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                     >  1:5996191‑M2/100‑101 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                     >  1:5704202‑M2/100‑101 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    >  1:8481078‑M2/99‑101 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    <  1:1447041‑M2/3‑1 (MQ=255)
    gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatta                                                                                                  <  1:10785986‑M2/5‑1 (MQ=255)
     tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattat                                                                                                 <  1:11891012‑M2/6‑1 (MQ=255)
     tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattat                                                                                                 <  1:9650090‑M2/6‑1 (MQ=255)
     aTCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAattat                                                                                                 <  1:11555573/101‑1 (MQ=255)
       cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatca                                                                                               <  1:3224929‑M2/8‑3 (MQ=255)
       cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattt                                                                                               <  1:6402469‑M2/8‑1 (MQ=255)
       cTGCCGCGGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTa                                                                                               >  1:11794740‑M1/1‑100 (MQ=255)
        tGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTag                                                                                              >  1:3335330‑M1/1‑99 (MQ=255)
        gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgctat                                                                                              >  1:8759606‑M2/93‑95 (MQ=255)
        gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattta                                                                                              >  1:5386868‑M2/93‑101 (MQ=255)
        gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattta                                                                                              >  1:5165371‑M2/93‑101 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTtata                                                                                            <  1:8647723‑M2/11‑1 (MQ=255)
           cgccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagact                                                                                           <  1:11295411‑M1/101‑6 (MQ=255)
            ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgctatcgct                                                                                          <  1:5813067‑M2/13‑11 (MQ=255)
            ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATg                                                                                          <  1:1525192‑M2/13‑1 (MQ=255)
            ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATg                                                                                          <  1:1301949‑M2/13‑1 (MQ=255)
            gccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg                                                                                          <  1:8169849‑M1/101‑7 (MQ=255)
             gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatcaggaaat                                                                                         <  1:7483233‑M2/14‑9 (MQ=255)
               tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGc                                                                                       <  1:7857891‑M2/16‑1 (MQ=255)
               tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGc                                                                                       <  1:6623124‑M2/16‑1 (MQ=255)
                aTGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccc                                                                                      >  1:6350550‑M1/1‑91 (MQ=255)
                 tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCaa                                                                                     >  1:2950736‑M2/84‑101 (MQ=255)
                 tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCaa                                                                                     >  1:627972‑M2/84‑101 (MQ=255)
                   gTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccct                                                                                   <  1:6797971‑M1/101‑14 (MQ=255)
                   gTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccct                                                                                   <  1:6075271‑M1/101‑14 (MQ=255)
                      cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCa                                                                                <  1:8557014‑M2/23‑1 (MQ=255)
                      aTGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaa                                                                                >  1:7365168‑M1/1‑85 (MQ=255)
                       tGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagaatggccccctgaat                                                                               >  1:9866843‑M1/1‑84 (MQ=255)
                         cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaa                                                                             >  1:4810377‑M2/76‑101 (MQ=255)
                          acgggaatatctgccggagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaaa                                                                            <  1:4700328‑M2/27‑1 (MQ=255)
                           gaacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctcc                                                                           >  1:6492074‑M1/1‑80 (MQ=255)
                           cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAAc                                                                           <  1:5635034‑M2/28‑1 (MQ=255)
                               gaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagac                                                                       <  1:6674964‑M1/101‑26 (MQ=255)
                                atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGAGCATAAACGGAtt                                                                      >  1:7765305‑M2/69‑101 (MQ=255)
                                   tctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGc                                                                   >  1:5531783‑M2/66‑101 (MQ=255)
                                    tGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacca                                                                  <  1:3590262‑M1/101‑31 (MQ=255)
                                      gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGt                                                                <  1:9414158‑M2/39‑1 (MQ=255)
                                       aCCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaata                                                               <  1:3938032‑M1/101‑34 (MQ=255)
                                         cGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatc                                                             <  1:190956‑M1/101‑36 (MQ=255)
                                          ggagctggagctGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatca                                                            <  1:7947816‑M1/101‑37 (MQ=255)
                                             gctggagctgCATACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatacaacta                                                         >  1:4927092‑M1/1‑62 (MQ=255)
                                               tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa                                                       <  1:2747218‑M1/101‑42 (MQ=255)
                                               ggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGt                                                       <  1:686087‑M2/48‑1 (MQ=255)
                                                 gagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaat                                                     <  1:8323623‑M1/101‑44 (MQ=255)
                                                  ttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTccc                                                    >  1:11055728‑M2/51‑101 (MQ=255)
                                                     tgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagt                                                 <  1:3671853‑M1/101‑48 (MQ=255)
                                                      gCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                <  1:4499007‑M1/101‑49 (MQ=255)
                                                      gCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                <  1:7295649‑M1/101‑49 (MQ=255)
                                                      gCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                >  1:3811838‑M1/1‑53 (MQ=255)
                                                      aatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAag                                                >  1:7597063‑M2/47‑101 (MQ=255)
                                                         tACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgata                                             <  1:5301858‑M1/101‑52 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            >  1:5576410‑M2/43‑101 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            <  1:4099128‑M2/59‑1 (MQ=255)
                                                           cAGTTCATATCGAAAATCTGGCCGCCGTATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt                                           <  1:2008621‑M1/101‑54 (MQ=255)
                                                            ttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGc                                          >  1:10420474‑M2/41‑101 (MQ=255)
                                                             taagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGcc                                         <  1:883116‑M2/62‑1 (MQ=255)
                                                              ttCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt                                        <  1:4382285‑M1/101‑57 (MQ=255)
                                                                  tatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata                                    <  1:8922559‑M1/101‑61 (MQ=255)
                                                                  gataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgt                                    <  1:3457147‑M2/67‑1 (MQ=255)
                                                                     cGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacta                                 <  1:1683182‑M1/101‑64 (MQ=255)
                                                                     aacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTc                                 >  1:2539558‑M2/32‑101 (MQ=255)
                                                                       aCAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt                               >  1:10602743‑M1/1‑36 (MQ=255)
                                                                         gatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTa                             <  1:8071899‑M2/74‑1 (MQ=255)
                                                                          atgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAc                            <  1:5860376‑M2/75‑1 (MQ=255)
                                                                              gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                        <  1:6966339‑M1/101‑73 (MQ=255)
                                                                              ctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCAGCTGTGTAACTACCGcc                        >  1:2403116‑M2/23‑101 (MQ=255)
                                                                                 cgccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta                     >  1:914857‑M1/1‑26 (MQ=255)
                                                                                  aaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCa                    <  1:4287767‑M2/83‑1 (MQ=255)
                                                                                   aatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCaa                   >  1:11367836‑M2/18‑101 (MQ=255)
                                                                                    cgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc                  >  1:10010114‑M1/1‑23 (MQ=255)
                                                                                    atataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAg                  >  1:2700577‑M2/17‑101 (MQ=255)
                                                                                     tataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAgg                 <  1:5021287‑M2/86‑1 (MQ=255)
                                                                                      cATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat                >  1:10146718‑M1/1‑21 (MQ=255)
                                                                                       aTTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcatt               >  1:2089679‑M1/1‑20 (MQ=255)
                                                                                         ttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg             <  1:7090966‑M1/101‑84 (MQ=255)
                                                                                          tGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga            <  1:9749238‑M1/101‑85 (MQ=255)
                                                                                           ggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGt           >  1:11688317‑M2/10‑101 (MQ=255)
                                                                                               aatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAg       >  1:308123‑M2/6‑101 (MQ=255)
                                                                                                atccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAgg      <  1:9362182‑M2/97‑1 (MQ=255)
                                                                                                atccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAgg      >  1:11464783‑M2/5‑101 (MQ=255)
                                                                                                atccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAgg      >  1:1959988‑M2/5‑101 (MQ=255)
                                                                                                atccAATTATTTATATGAGCAAGGGCATAAACGGATTAGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAgg      >  1:363004‑M2/5‑101 (MQ=255)
                                                                                                  ccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAGGGCTATGTTCAGgcg    >  1:10964073‑M2/3‑101 (MQ=255)
                                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGTGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt  <  1:10503160‑M2/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.