New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 190728811 (0.050)237 (1.010) 119/180 NT 95.6% intergenic (+315/‑114) yobD/yebN inner membrane protein/inner membrane protein
?NC_007779 2411458 = NA (NA)intergenic (‑147/+15) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein

Only 100 of 525 total aligned reads displayed.

GTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATACCCCGG  >  NC_007779/1907188‑1907388
                                                                                                    |                                                                                                    
gTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGca                                                                                                      <  1:3715315/101‑1 (MQ=255)
gTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGca                                                                                                      >  1:4843830/1‑101 (MQ=255)
gTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGca                                                                                                      <  1:7534658/101‑1 (MQ=255)
    ccGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggta                                                                                                  <  1:5451812‑M1/101‑5 (MQ=255)
     caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCAcataa                                                                                                 <  1:8855091‑M1/14‑3 (MQ=255)
     caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCa                                                                                                 <  1:8971316‑M1/14‑1 (MQ=255)
      gATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaat                                                                                                <  1:9832100‑M1/101‑7 (MQ=255)
      gATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaat                                                                                                <  1:9472550‑M1/101‑7 (MQ=255)
         agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCg                                                                                             >  1:631308‑M1/84‑101 (MQ=255)
           ccAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactc                                                                                           <  1:11503300‑M1/101‑12 (MQ=255)
             acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTAt                                                                                         <  1:855125‑M1/22‑1 (MQ=255)
             aGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactcca                                                                                         >  1:4538823‑M1/1‑88 (MQ=255)
                ttCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaact                                                                                      >  1:9082226‑M1/1‑85 (MQ=255)
                 ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCt                                                                                     >  1:10708668‑M1/76‑101 (MQ=255)
                 ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCt                                                                                     >  1:3294267‑M1/76‑101 (MQ=255)
                  tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTg                                                                                    <  1:2259921‑M1/27‑1 (MQ=255)
                      agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATg                                                                                <  1:1119223‑M1/31‑1 (MQ=255)
                      aaaTGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattga                                                                                >  1:10018285‑M1/1‑79 (MQ=255)
                        aTGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgata                                                                              >  1:11023625‑M1/1‑77 (MQ=255)
                           tACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAAGCGAGACCATATGCAggtaatgactccaacttattgatagtg                                                                           >  1:190729‑M1/1‑74 (MQ=255)
                            agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAcgcg                                                                          <  1:7675991‑M1/37‑1 (MQ=255)
                            aCGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgt                                                                          <  1:5748949‑M1/101‑29 (MQ=255)
                               tgtCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgtttt                                                                       <  1:10527167‑M1/101‑32 (MQ=255)
                               agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGaaa                                                                       >  1:1617544‑M1/62‑101 (MQ=255)
                               agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGaaa                                                                       <  1:6806140‑M1/40‑1 (MQ=255)
                                 tCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttat                                                                     >  1:4705945‑M1/1‑68 (MQ=255)
                                  cAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatg                                                                    >  1:3799334‑M1/1‑67 (MQ=255)
                                  cAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatg                                                                    >  1:10286909‑M1/1‑67 (MQ=255)
                                     cATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttc                                                                 <  1:6917106‑M1/101‑38 (MQ=255)
                                        aCTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcaga                                                              <  1:3949499‑M1/101‑41 (MQ=255)
                                        aCTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcaga                                                              >  1:23229‑M1/1‑61 (MQ=255)
                                         cTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagat                                                             <  1:1538800‑M1/101‑42 (MQ=255)
                                         cTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagat                                                             <  1:1297056‑M1/101‑42 (MQ=255)
                                          tCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagata                                                            >  1:11771345‑M1/1‑59 (MQ=255)
                                              tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCttgt                                                        >  1:9451276‑M1/47‑101 (MQ=255)
                                              tGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                        >  1:1134845‑M1/1‑55 (MQ=255)
                                                 aaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTTCATGAACGCGAAAACCATCACGGCTtgttgt                                                     >  1:2801077‑M1/44‑101 (MQ=255)
                                                   aacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTc                                                   <  1:6578423‑M1/60‑1 (MQ=255)
                                                    acaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCa                                                  <  1:10387408‑M1/61‑1 (MQ=255)
                                                    acaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCa                                                  <  1:2093478‑M1/61‑1 (MQ=255)
                                                     cGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                                 <  1:4991879‑M1/101‑54 (MQ=255)
                                                     cGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                                 <  1:4193652‑M1/101‑54 (MQ=255)
                                                      gTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac                                                >  1:7913393‑M1/1‑47 (MQ=255)
                                                        catcatacactaaatcagtaagttggcagcatcaccCCATATGCACCTCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTa                                              >  1:8660510‑M1/37‑101 (MQ=255)
                                                         atcatacactaaatcagtaagttggcagcatcaccCGATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTAt                                             <  1:9655711‑M1/66‑1 (MQ=255)
                                                           aCGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                           >  1:6490759‑M1/1‑42 (MQ=255)
                                                            atacactaaatcagtaagttggcagcatcaccCCATATGCACAGCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCa                                          >  1:7782929‑M1/33‑101 (MQ=255)
                                                               aCGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                       >  1:4097176‑M1/1‑38 (MQ=255)
                                                                 ggACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                     <  1:5893064‑M1/101‑66 (MQ=255)
                                                                 ctaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGttt                                     >  1:5356055‑M1/28‑101 (MQ=255)
                                                                 ctaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGttt                                     <  1:1592402‑M1/74‑1 (MQ=255)
                                                                 ctaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGttt                                     <  1:8603747‑M1/74‑1 (MQ=255)
                                                                 ctaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGttt                                     >  1:9927722‑M1/28‑101 (MQ=255)
                                                                  taaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTg                                    <  1:3193096‑M1/75‑1 (MQ=255)
                                                                  gACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag                                    >  1:10147000‑M1/1‑35 (MQ=255)
                                                                   aCTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                   <  1:5568005‑M1/101‑68 (MQ=255)
                                                                   aCTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                   >  1:5193890‑M1/1‑34 (MQ=255)
                                                                    aatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCt                                  >  1:8385295‑M1/25‑101 (MQ=255)
                                                                     tGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                 >  1:739732‑M1/1‑32 (MQ=255)
                                                                      tcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCCCGGCTTGTTGTTCATGTATGCATGTTTGCTgg                                >  1:11400868‑M1/23‑101 (MQ=255)
                                                                      tcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTgg                                <  1:8761676‑M1/79‑1 (MQ=255)
                                                                      gAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                <  1:11693170‑M1/101‑71 (MQ=255)
                                                                       cagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTggg                               >  1:3105013‑M1/22‑101 (MQ=255)
                                                                       cagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTggg                               >  1:4585000‑M1/22‑101 (MQ=255)
                                                                        agtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTgggg                              >  1:9778958‑M1/21‑101 (MQ=255)
                                                                        agtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTgggg                              >  1:7741320‑M1/21‑101 (MQ=255)
                                                                        aTACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                              <  1:8088048‑M1/101‑73 (MQ=255)
                                                                        aTACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                              <  1:10755960‑M1/101‑73 (MQ=255)
                                                                         gtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTggggg                             <  1:3015317‑M1/82‑1 (MQ=255)
                                                                          taagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGc                            >  1:2578224‑M1/19‑101 (MQ=255)
                                                                           cTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga                           <  1:9185501‑M1/101‑76 (MQ=255)
                                                                           cTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccga                           >  1:3506852‑M1/1‑26 (MQ=255)
                                                                            tttCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                          >  1:1422113‑M1/1‑25 (MQ=255)
                                                                            agttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCga                          >  1:6694490‑M1/17‑101 (MQ=255)
                                                                            agtcggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCga                          <  1:29293‑M1/85‑1 (MQ=255)
                                                                              ttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCgatg                        <  1:2465448‑M1/87‑1 (MQ=255)
                                                                               tggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCgatga                       >  1:4425515‑M1/14‑101 (MQ=255)
                                                                               tggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCgatga                       >  1:11649006‑M1/14‑101 (MQ=255)
                                                                                  tcagGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag                    <  1:6032072‑M1/101‑83 (MQ=255)
                                                                                   cagGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga                   <  1:7222931‑M1/101‑84 (MQ=255)
                                                                                   cagGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga                   >  1:1833739‑M1/1‑18 (MQ=255)
                                                                                     catcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGtt                 >  1:9287527‑M1/8‑101 (MQ=255)
                                                                                      gCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacg                >  1:705873‑M1/1‑15 (MQ=255)
                                                                                      gCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacg                >  1:9512626‑M1/1‑15 (MQ=255)
                                                                                       cGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga               >  1:2183911‑M1/1‑14 (MQ=255)
                                                                                         agaCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca             >  1:7298119‑M1/1‑12 (MQ=255)
                                                                                         agaCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca             >  1:362676‑M1/1‑12 (MQ=255)
                                                                                          gaCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag            <  1:8312053‑M1/101‑91 (MQ=255)
                                                                                          gaCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag            >  1:2012871‑M1/1‑11 (MQ=255)
                                                                                          ccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATg            >  1:8207718‑M1/3‑101 (MQ=255)
                                                                                           cCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATgg           <  1:1736261‑M1/100‑1 (MQ=255)
                                                                                           cCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATgg           >  1:4648016‑M1/2‑101 (MQ=255)
                                                                                           aCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc           >  1:1223‑M1/1‑10 (MQ=255)
                                                                                           aCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc           <  1:2686535‑M1/101‑92 (MQ=255)
                                                                                             cATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGAt         >  1:3076592/1‑101 (MQ=255)
                                                                                              atatGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATa        <  1:6164393/101‑1 (MQ=255)
                                                                                                 tGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATAccc     <  1:6966658/101‑1 (MQ=255)
                                                                                                  gCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATAcccc    <  1:10656769/101‑1 (MQ=255)
                                                                                                  gCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATAcccc    <  1:4339736/101‑1 (MQ=255)
                                                                                                   cAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg   >  1:3355515‑M1/1‑2 (MQ=255)
                                                                                                    |                                                                                                    
GTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGATACCCCGG  >  NC_007779/1907188‑1907388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.