Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077791,772,1831.→T 0.8% 2.5 ‑0.7 ‑0.1254intergenic (+283/‑146)ydiK/ydiLinner membrane protein/hypothetical protein
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands.
Rejected: Polymorphic indel expands or contracts a homopolymer stretch.
Reads supporting (aligned to +/- strand):  new base (0/2):  ref base (120/132):  total (120/134)
Fisher's exact test strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.39e-01

Only 100 of 296 total aligned reads displayed.

CTCACGGTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTCAGCAGGCTGAT  >  NC_007779/1772083‑1772283
                                                                                                     |                                                                                                    
cTCACGGTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGc                                                                                                       >  1:9868085/1‑101 (MQ=255)
cTCACGGTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGc                                                                                                       >  1:2017572/1‑101 (MQ=255)
cTCACGGTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGc                                                                                                       >  1:1176216/1‑101 (MQ=255)
 tCACGGTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑t                                                                                                     <  1:4539759/101‑1 (MQ=255)
  cACGGTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑tt                                                                                                    >  1:5977294/1‑101 (MQ=255)
  cACGGTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑tt                                                                                                    >  1:1353706/1‑101 (MQ=255)
    cGGTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑tttt                                                                                                  <  1:6955303/101‑1 (MQ=255)
     ggTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑ttttt                                                                                                 <  1:7832471/101‑1 (MQ=255)
     ggTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑ttttt                                                                                                 >  1:6043031/1‑101 (MQ=255)
      gTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑tttttt                                                                                                >  1:10734936/1‑101 (MQ=255)
       ttATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGCATTGCGGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑ttttttt                                                                                               >  1:8651363/1‑101 (MQ=255)
       ttATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑ttttttt                                                                                               >  1:3006111/1‑101 (MQ=255)
        tataAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑tttttttt                                                                                              <  1:4399258/101‑1 (MQ=255)
            aaTCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACa                                                                                          <  1:11437024/101‑1 (MQ=255)
             aTCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACAt                                                                                         >  1:10103583/1‑101 (MQ=255)
              tCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACAtt                                                                                        <  1:9550370/101‑1 (MQ=255)
               cAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACAttt                                                                                       >  1:9486822/1‑101 (MQ=255)
                 aCATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACAttttt                                                                                     <  1:8824130/101‑1 (MQ=255)
                 aCATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACAttttt                                                                                     <  1:363950/101‑1 (MQ=255)
                  cATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTc                                                                                    <  1:1067480/101‑1 (MQ=255)
                   atatTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTcc                                                                                   >  1:2064508/1‑101 (MQ=255)
                   atatTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTcc                                                                                   >  1:1031126/1‑101 (MQ=255)
                    tatTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCg                                                                                  <  1:3440286/101‑1 (MQ=255)
                     atTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGc                                                                                 >  1:403718/1‑101 (MQ=255)
                      ttGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCt                                                                                <  1:6216092/101‑1 (MQ=255)
                       tGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCtt                                                                               >  1:2919508/1‑101 (MQ=255)
                       tGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCtt                                                                               <  1:4218959/101‑1 (MQ=255)
                          tttATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGc                                                                            <  1:2358854/101‑1 (MQ=255)
                          tttATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGc                                                                            >  1:11605910/1‑101 (MQ=255)
                            tataAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTCGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTa                                                                          >  1:9213412/1‑101 (MQ=255)
                            tataAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTa                                                                          >  1:5649668/1‑101 (MQ=255)
                            tataAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTa                                                                          <  1:3077224/101‑1 (MQ=255)
                            tataAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTa                                                                          >  1:5334360/1‑101 (MQ=255)
                              taAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTAcc                                                                        >  1:1855243/1‑101 (MQ=255)
                               aaGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCt                                                                       >  1:4108522/1‑101 (MQ=255)
                                aGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTc                                                                      <  1:5365977/101‑1 (MQ=255)
                                aGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTc                                                                      <  1:6761534/101‑1 (MQ=255)
                                aGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTc                                                                      >  1:1529708/1‑101 (MQ=255)
                                 gCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCg                                                                     >  1:11804571/1‑101 (MQ=255)
                                 gCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCg                                                                     >  1:8609650/1‑101 (MQ=255)
                                   aTGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGcc                                                                   >  1:5226705/1‑101 (MQ=255)
                                     ggAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGcccc                                                                 >  1:1627810/1‑101 (MQ=255)
                                     ggAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGcccc                                                                 >  1:3975189/1‑101 (MQ=255)
                                      gAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGcccca                                                                <  1:5855933/101‑2 (MQ=255)
                                         aTCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCAc                                                             <  1:6647311/101‑1 (MQ=255)
                                          tCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCAct                                                            <  1:4655590/101‑1 (MQ=255)
                                            cccTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCActct                                                          <  1:5501914/101‑1 (MQ=255)
                                            cccTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCActct                                                          >  1:1279501/1‑101 (MQ=255)
                                             ccTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCtt                                                         >  1:5010721/1‑101 (MQ=255)
                                              cTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCttt                                                        >  1:5613591/1‑101 (MQ=255)
                                                   tGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCaat                                                   >  1:11098754/1‑101 (MQ=255)
                                                   tGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCaat                                                   <  1:4615119/101‑1 (MQ=255)
                                                    gAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCaata                                                  <  1:7149356/101‑1 (MQ=255)
                                                    gAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCaata                                                  <  1:9621423/101‑1 (MQ=255)
                                                    gAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCaata                                                  >  1:1730736/1‑101 (MQ=255)
                                                       acaacGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATg                                               >  1:939657/1‑101 (MQ=255)
                                                           cGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGc                                           <  1:2307777/101‑1 (MQ=255)
                                                            gAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGca                                          >  1:10146767/1‑101 (MQ=255)
                                                              aTTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTGCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGcaca                                        >  1:7666277/1‑101 (MQ=255)
                                                              aTTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGcaca                                        >  1:7202880/1‑101 (MQ=255)
                                                                tGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAg                                      <  1:2569070/101‑1 (MQ=255)
                                                                  cTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATCTTGCACAAGAt                                    <  1:10252662/101‑1 (MQ=255)
                                                                  cTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGATACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGAt                                    >  1:8684162/1‑101 (MQ=255)
                                                                   tgtgtgTAGTCTTTGCCCATCTCCCATGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATa                                   <  1:10266933/101‑1 (MQ=255)
                                                                   tgtgtgTAGTCTTTGCCCATCTCCCACGATGGGCTTTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGAt                                    <  1:5790055/101‑1 (MQ=255)
                                                                   tgtgtgTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACTTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATa                                   >  1:10073785/1‑101 (MQ=255)
                                                                   tgtgtgTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATa                                   <  1:2458495/101‑1 (MQ=255)
                                                                   tgtgtgTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATa                                   <  1:10369720/101‑1 (MQ=255)
                                                                      gtgtAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACtg                                >  1:1434458/1‑101 (MQ=255)
                                                                       tgtAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACtgt                               >  1:3296495/1‑101 (MQ=255)
                                                                         tAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGa                             >  1:8337955/1‑101 (MQ=255)
                                                                           gTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGAct                           <  1:8201851/101‑1 (MQ=255)
                                                                             cTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTACGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGActct                         >  1:11268714/1‑101 (MQ=255)
                                                                               ttGCCCATCTCCCACGATGGGC‑TTTTTTTTAACCTTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGActctct                       >  1:8943201/1‑101 (MQ=255)
                                                                               ttGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGActctct                       <  1:9134394/101‑1 (MQ=255)
                                                                                tGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCtt                      <  1:3826466/101‑1 (MQ=255)
                                                                                   ccATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCaa                   >  1:8058545/1‑101 (MQ=255)
                                                                                   ccATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCaa                   >  1:11036953/1‑101 (MQ=255)
                                                                                    cATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAg                  >  1:10015228/1‑101 (MQ=255)
                                                                                    cATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAg                  <  1:1080426/101‑1 (MQ=255)
                                                                                     aTCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGc                 >  1:10218461/1‑101 (MQ=255)
                                                                                     aTCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGc                 <  1:4760090/101‑1 (MQ=255)
                                                                                       ctcCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCg               <  1:8451812/101‑1 (MQ=255)
                                                                                       ctcCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCg               >  1:7452426/1‑101 (MQ=255)
                                                                                         cccACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTc             <  1:7276905/101‑1 (MQ=255)
                                                                                          ccACGATGGGC‑TTTTTTTTTACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTca            <  1:9003944/101‑1 (MQ=255)
                                                                                           cACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTcag           <  1:3176930/101‑1 (MQ=255)
                                                                                           cACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTcag           <  1:467341/101‑1 (MQ=255)
                                                                                           cACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTcag           <  1:6481814/101‑1 (MQ=255)
                                                                                            aCGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTcagc          >  1:8756938/1‑101 (MQ=255)
                                                                                            aCGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTcagc          >  1:5292447/1‑101 (MQ=255)
                                                                                            aCGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTcagc          >  1:5904695/1‑101 (MQ=255)
                                                                                            aCGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTcagc          >  1:3496416/1‑101 (MQ=255)
                                                                                             cGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTcagca         <  1:7904975/101‑1 (MQ=255)
                                                                                              gATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTcagcag        <  1:1582341/101‑1 (MQ=255)
                                                                                               aTGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTCAGCAgg       >  1:11162255/1‑101 (MQ=255)
                                                                                               aTGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTCAGCAgg       <  1:6141668/101‑1 (MQ=255)
                                                                                                 gggC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTCAGCAGGCt     <  1:434987/101‑1 (MQ=255)
                                                                                                  ggC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCCCTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTCAGCAGGCTg    <  1:6556965/101‑1 (MQ=255)
                                                                                                  ggC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTCAGCAGGCTg    <  1:1212570/101‑1 (MQ=255)
                                                                                                     |                                                                                                    
CTCACGGTTATAAATCAACATATTGATTTATAAGCATGGAAATCCCCTGAGTGAAACAACGAATTGCTGTGTGTAGTCTTTGCCCATCTCCCACGATGGGC‑TTTTTTTTAACATTTTTCCGCTTCGCTACCTCGCCCCTCACTCTTTCCAATAATGTTGCACAAGATACTGTGACTCTCTTCAAGCCGTCAGCAGGCTGAT  >  NC_007779/1772083‑1772283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.