| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,576,400 | 1 | .→A | 1.1% | 7.7 ‑0.5 ‑0.3 | 261 | intergenic (‑166/+51) | yihL/bipA | DNA‑binding transcriptional regulator/GTP‑binding protein |
| Rejected: Polymorphism prediction not supported by minimum number of reads on both strands. | ||||||||||
| Rejected: Polymorphic indel expands or contracts a homopolymer stretch. | ||||||||||
| Reads supporting (aligned to +/- strand): new base (2/1): ref base (114/144): total (116/145) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.87e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.17e-01 | ||||||||||
Only 100 of 294 total aligned reads displayed.
AACGGCGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGTTTTCCGTCA > NC_007779/3576300‑3576500 aaCGGCGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGc > 1:6665509/1‑101 (MQ=255)aaCGGCGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGc < 1:1060420/101‑1 (MQ=255)aaCGGCGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGc > 1:1513803/1‑101 (MQ=255) aCGGCGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCa > 1:2124536/1‑101 (MQ=255) aCGGCGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCa > 1:6288332/1‑101 (MQ=255) aCGGCGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCa > 1:7479364/1‑101 (MQ=255) gCGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCaaaa < 1:938159/101‑1 (MQ=255) cGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCaaaaa < 1:10493567/101‑1 (MQ=255) cGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCaaaaa > 1:135192/1‑101 (MQ=255) aTGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCaaaaaaaa > 1:10038385/1‑101 (MQ=255) tGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCaaaaaaaaa > 1:1754430/1‑101 (MQ=255) gACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAAc < 1:6291535/101‑1 (MQ=255) cTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCt > 1:10180858/1‑101 (MQ=255) tGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGcc > 1:2527776/1‑101 (MQ=255) gCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCa > 1:8095982/1‑101 (MQ=255) cAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCAt > 1:2366875/1‑101 (MQ=255) cAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCAt < 1:6447522/101‑1 (MQ=255) tAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCt < 1:3617939/101‑1 (MQ=255) aaTTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTg > 1:9072581/1‑101 (MQ=255) aaTTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTg > 1:6583721/1‑101 (MQ=255) aaTTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTg < 1:4282639/101‑1 (MQ=255) tgtgACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCa < 1:1215414/101‑1 (MQ=255) tgtgACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCa < 1:1882058/101‑1 (MQ=255) gtgACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAg < 1:489628/101‑1 (MQ=255) tgACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAgg < 1:7685752/101‑1 (MQ=255) tgACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAgg > 1:2258585/1‑101 (MQ=255) gACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGt < 1:7343331/101‑1 (MQ=255) aCAAAGCTCTCTATTGGCGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGtt > 1:2868716/1‑101 (MQ=255) cAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGttt < 1:10762020/101‑1 (MQ=255) aaaGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGC‑AAAAAAAACCTGCCATCGCTGGCAGGttttt > 1:11043068/1‑101 (MQ=255) aaGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGttttt < 1:4479086/101‑1 (MQ=255) aGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGtttttt < 1:594619/101‑1 (MQ=255) aGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGtttttt > 1:3161137/1‑101 (MQ=255) ctctctATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGgttttttt > 1:2457817/1‑99 (MQ=255) ctctctATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTAt > 1:9509785/1‑101 (MQ=255) tctctATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATg < 1:5575572/101‑1 (MQ=255) ctctATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGa < 1:3722733/101‑1 (MQ=255) ctctATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGa < 1:6998143/101‑1 (MQ=255) tctATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGAc > 1:3507948/1‑101 (MQ=255) tctATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGAc > 1:8365006/1‑101 (MQ=255) ctATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACt < 1:7443663/101‑1 (MQ=255) ctATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGGGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACt > 1:11708340/1‑101 (MQ=255) tATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTa < 1:7076850/101‑1 (MQ=255) ttGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTaaa < 1:4376349/101‑1 (MQ=255) tGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGAAGGTTTTTTATGACTaaaa > 1:1179088/1‑101 (MQ=255) aCGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTaaaaaa > 1:4933775/1‑101 (MQ=255) cGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAAc > 1:6111410/1‑101 (MQ=255) cGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAAc > 1:11541963/1‑101 (MQ=255) gTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTCTTTTATGACTAAAAAACg > 1:9627347/1‑101 (MQ=255) ccACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAAt < 1:7813699/101‑1 (MQ=255) ccACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAAt > 1:5863286/1‑101 (MQ=255) aGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAAt > 1:9410013/1‑101 (MQ=255) aGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAAt < 1:4558632/101‑1 (MQ=255) cTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGt > 1:6751008/1‑101 (MQ=255) cTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGt < 1:6540733/101‑1 (MQ=255) ttATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTc > 1:2014787/1‑101 (MQ=255) ttATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTc < 1:1650921/101‑1 (MQ=255) ataAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTTtt > 1:66394/1‑101 (MQ=255) ataAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCtt > 1:6865664/1‑101 (MQ=255) taAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCttt < 1:7037053/101‑1 (MQ=255) taAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCttt < 1:6025418/101‑1 (MQ=255) taAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCttt > 1:7870596/1‑101 (MQ=255) taAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCttt < 1:4203111/101‑1 (MQ=255) taAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCttt < 1:10882318/101‑1 (MQ=255) gggAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCgg > 1:10347579/1‑101 (MQ=255) ggAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGt > 1:11627651/1‑101 (MQ=255) gagaTACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTg < 1:10218184/101‑1 (MQ=255) gagaTACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTg < 1:9920365/101‑1 (MQ=255) gagaTACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTg < 1:2961595/101‑1 (MQ=255) gagaTACTCGCAGTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTg < 1:3813390/101‑1 (MQ=255) aCTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCgg > 1:11498211/1‑101 (MQ=255) cTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGt > 1:11165827/1‑101 (MQ=255) tCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGtt < 1:542545/101‑1 (MQ=255) tCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGtt < 1:499617/101‑1 (MQ=255) gCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCTGTGCGCGGTTgg < 1:2574370/101‑1 (MQ=255) gCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTgg < 1:4042843/101‑1 (MQ=255) aTTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGgcg < 1:8502012/101‑1 (MQ=255) aTTGGTGTGCCCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGgcg < 1:4694196/101‑1 (MQ=255) ttGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGgcgc > 1:5770141/1‑101 (MQ=255) ttGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGgcgc < 1:3245327/101‑1 (MQ=255) tGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTCTGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGcgcg < 1:9244444/101‑1 (MQ=255) tGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGcgcg < 1:3303198/101‑1 (MQ=255) tGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCAGCGCTGGCAGGTTTTTTATGAATAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGcgcg < 1:11323812/101‑1 (MQ=255) gcgcTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGcgacg > 1:2803537/1‑101 (MQ=255) gcgcTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGcgacg < 1:3436491/101‑1 (MQ=255) cgcTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGcgacga < 1:1784259/101‑1 (MQ=255) cTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGGCTTTCGGTGCGCGGTTGGCGCGGcgacggtg > 1:10005434/1‑98 (MQ=255) cTCACGACAGGAAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATc < 1:8188097/101‑1 (MQ=255) tCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCg > 1:2616548/1‑101 (MQ=255) tCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCg < 1:1141977/101‑1 (MQ=255) cACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGt < 1:8969187/101‑1 (MQ=255) cACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGt < 1:5033557/101‑1 (MQ=255) gACAGGC‑AAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGTTTTc > 1:5154538/1‑101 (MQ=255) cAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGTTTTcc > 1:915967/1‑101 (MQ=255) cAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGGTGGCGCGGCGACGATCGTTTTcc > 1:5982143/1‑101 (MQ=255) aGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGTTTTCCg < 1:5341949/101‑1 (MQ=255) aGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGTTTTCCg > 1:6500387/1‑101 (MQ=255) gCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGTTTTCCGTc > 1:4765834/1‑101 (MQ=255) gCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGTTTTCCGTc < 1:8757800/101‑1 (MQ=255) cAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGTTTTCCGTCa < 1:8631140/101‑1 (MQ=255) AACGGCGTATGACTTTGCAGATAATTGTGACAAAGCTCTCTATTGACGTAACCACAGACTTATAAGGGAGATACTCGCATTGGTGTGCGCTCACGACAGGCAAAAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTAAAAAACGAAATTAATCGTCTTTCGGTGCGCGGTTGGCGCGGCGACGATCGTTTTCCGTCA > NC_007779/3576300‑3576500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |