| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,689,613 | 1 | .→A | 1.1% | 7.4 ‑0.5 ‑0.1 | 276 | intergenic (+60/+36) | hdfR/trpT | DNA‑binding transcriptional regulator/tRNA‑Trp |
| Rejected: Polymorphism prediction not supported by minimum number of reads on both strands. | ||||||||||
| Rejected: Polymorphic indel expands or contracts a homopolymer stretch. | ||||||||||
| Reads supporting (aligned to +/- strand): new base (1/2): ref base (141/132): total (142/134) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.13e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.36e-01 | ||||||||||
Only 100 of 303 total aligned reads displayed.
GCGATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAATTGA > NC_007779/3689513‑3689713 | gcgATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAt < 1:5902302/101‑1 (MQ=255)gcgATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAt < 1:7395875/101‑1 (MQ=255) cgATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑a < 1:5414636/101‑1 (MQ=255) cgATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑a < 1:6046871/101‑1 (MQ=255) cgATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑a < 1:8112039/101‑1 (MQ=255) gATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑aa > 1:3446342/1‑101 (MQ=255) gATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑aa > 1:8752725/1‑101 (MQ=255) gATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATACGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑aa > 1:5851389/1‑101 (MQ=255) aTCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑aaa > 1:8851811/1‑101 (MQ=255) cTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑aaaaa > 1:549178/1‑101 (MQ=255) tGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAAt < 1:9668258/101‑1 (MQ=255) aaaaTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATcc < 1:6283578/101‑1 (MQ=255) aaaaTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATcc < 1:9838520/101‑1 (MQ=255) aaaaTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATcc > 1:11145258/1‑101 (MQ=255) aaaTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCt < 1:10448575/101‑1 (MQ=255) aTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTa < 1:10653097/101‑1 (MQ=255) ttAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAg < 1:3749539/101‑1 (MQ=255) ttAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAg < 1:4804728/101‑1 (MQ=255) ttAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAg < 1:955236/101‑1 (MQ=255) tAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGc > 1:657430/1‑101 (MQ=255) tAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGc > 1:7199693/1‑101 (MQ=255) aaCGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCt < 1:6752259/101‑1 (MQ=255) aaCGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCt > 1:4065782/1‑101 (MQ=255) aaCGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCt > 1:9291480/1‑101 (MQ=255) cGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCttt < 1:5571454/101‑1 (MQ=255) cGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCttt > 1:10842304/1‑101 (MQ=255) tGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCg > 1:8585991/1‑101 (MQ=255) cTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCt > 1:4376419/1‑101 (MQ=255) tGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTa > 1:3488783/1‑101 (MQ=255) ggATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTaa > 1:10530506/1‑101 (MQ=255) ggATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTaa > 1:5963395/1‑101 (MQ=255) gATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAg < 1:5819708/101‑1 (MQ=255) aTGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAgg < 1:5777398/101‑1 (MQ=255) aTGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAgg < 1:6693867/101‑1 (MQ=255) aTGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAgg > 1:7959928/1‑101 (MQ=255) tGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGTGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGga > 1:8718997/1‑101 (MQ=255) tGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGga > 1:3219555/1‑101 (MQ=255) tGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGga > 1:399701/1‑101 (MQ=255) gAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGgat > 1:2078814/1‑101 (MQ=255) gAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGgat < 1:8025561/101‑1 (MQ=255) gtgtATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGgatgat < 1:28035/101‑1 (MQ=255) tgtATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGAtt < 1:10867647/101‑1 (MQ=255) tgtATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGAtt < 1:6353682/101‑1 (MQ=255) tATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTc < 1:9141850/101‑1 (MQ=255) aTTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCt < 1:10807721/101‑1 (MQ=255) aTTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCt < 1:1843925/101‑1 (MQ=255) ttAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTg < 1:1300624/101‑1 (MQ=255) ttAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTg > 1:5273021/1‑101 (MQ=255) ttAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAAACCTTAGCTTTCGCTAAGGATGATTTCTg < 1:6522906/101‑1 (MQ=255) tAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTgg > 1:2964637/1‑101 (MQ=255) aaTATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGc > 1:5044221/1‑101 (MQ=255) aaTATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGc > 1:9185003/1‑101 (MQ=255) atatGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCa > 1:2716515/1‑101 (MQ=255) atatGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATACTTAGCTTTCGCTAAGGATGATTTCTGGCa < 1:5335203/101‑1 (MQ=255) atGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAgg < 1:5106799/101‑1 (MQ=255) gAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAgggg < 1:1923033/101‑1 (MQ=255) tggctggcAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCgg < 1:10112388/101‑1 (MQ=255) ggctggcAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGga > 1:1027785/1‑101 (MQ=255) gctggcAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGgag > 1:9480373/1‑101 (MQ=255) ctggcAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGgaga < 1:1773087/101‑1 (MQ=255) tggcAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGgagag < 1:8342699/101‑1 (MQ=255) tggcAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGgagag > 1:8237382/1‑101 (MQ=255) gcAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATACTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGAc > 1:7809564/1‑101 (MQ=255) cAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTTTGGCAGGGGCGGAGAGACt > 1:11366862/1‑101 (MQ=255) cAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGCCt > 1:3896068/1‑101 (MQ=255) aaGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTc > 1:11633660/1‑101 (MQ=255) ggATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGa < 1:4624678/101‑1 (MQ=255) aTGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAAc > 1:11104927/1‑101 (MQ=255) aTGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAAc > 1:9433242/1‑101 (MQ=255) tGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACt > 1:10957156/1‑101 (MQ=255) tGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACt < 1:11257114/101‑1 (MQ=255) gTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCaa > 1:4155135/1‑101 (MQ=255) tAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAac < 1:4042159/101‑1 (MQ=255) tAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAac > 1:848676/1‑101 (MQ=255) aGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAaca > 1:1994619/1‑101 (MQ=255) gAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAacac > 1:9266912/1‑101 (MQ=255) aaGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACAcc > 1:7668367/1‑101 (MQ=255) aGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACAccc > 1:329842/1‑101 (MQ=255) gATTTACTTCGGAGAGGGTTATTTAAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGAAGGGGCGGAGAGACTCGAACTCCCAACACCCgg > 1:8662852/1‑101 (MQ=255) aTTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGt > 1:5662428/1‑101 (MQ=255) tttACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGtt > 1:2377164/1‑101 (MQ=255) ttACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGttt > 1:1465107/1‑101 (MQ=255) tACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGtttt < 1:9030090/101‑1 (MQ=255) ttCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGga < 1:2680084/101‑1 (MQ=255) cGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGgaga > 1:316010/1‑101 (MQ=255) ggAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGAc > 1:11833925/1‑101 (MQ=255) gagaGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGAcc < 1:7579070/101‑1 (MQ=255) agagGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCg > 1:2338544/1‑101 (MQ=255) gTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGct > 1:7474405/1‑101 (MQ=255) ttATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGctc < 1:1604382/101‑1 (MQ=255) tATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGctct > 1:21155/1‑101 (MQ=255) aTTTCAGATAAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGctct < 1:9076080/101‑1 (MQ=255) aTTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTa > 1:1202581/1‑101 (MQ=255) tttCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTAc > 1:7335486/1‑101 (MQ=255) tttCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTAc > 1:4493722/1‑101 (MQ=255) ttCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTAcc > 1:11508528/1‑101 (MQ=255) tCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCa < 1:1726550/101‑1 (MQ=255) tCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGAAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCa < 1:8073740/101‑1 (MQ=255) aGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAAt > 1:6881178/1‑101 (MQ=255) gAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAAtt < 1:2260342/101‑1 (MQ=255) | GCGATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAT‑AAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAATTGA > NC_007779/3689513‑3689713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |