| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,730,081 | 1 | .→G | 0.8% | 2.7 ‑0.7 ‑0.4 | 265 | intergenic (+253/‑33) | phoU/bglG | DNA‑binding transcriptional regulator/transcriptional antiterminator of the bgl operon |
| Rejected: Polymorphism prediction not supported by minimum number of reads on both strands. | ||||||||||
| Rejected: Polymorphic indel expands or contracts a homopolymer stretch. | ||||||||||
| Reads supporting (aligned to +/- strand): new base (2/0): ref base (144/119): total (146/119) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.03e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.68e-01 | ||||||||||
Only 100 of 287 total aligned reads displayed.
TCCGAACCTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCAACAGCGGGA > NC_007779/3729981‑3730181 tCCGAACCTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTc < 1:10728453/101‑1 (MQ=255) ccGAACCTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCg > 1:2276166/1‑101 (MQ=255) cGAACCTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCgg > 1:8243280/1‑101 (MQ=255) cGAACCTGGATGTTCGTTATAAAAACCATTAAAAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCgg < 1:8888221/101‑1 (MQ=255) gAACCTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCggg > 1:7981718/1‑101 (MQ=255) gAACCTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCggg < 1:3652849/101‑1 (MQ=255) aaCCTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGt > 1:5209674/1‑101 (MQ=255) aCCTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGtt < 1:1675419/101‑1 (MQ=255) ccTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGttt > 1:8086935/1‑101 (MQ=255) tGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGttttt > 1:5493659/1‑101 (MQ=255) tGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGttttt > 1:2478741/1‑101 (MQ=255) tGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGttttt < 1:3438635/101‑1 (MQ=255) gATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGttttttt < 1:9602777/101‑1 (MQ=255) aTGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTg > 1:10223775/1‑101 (MQ=255) aTGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTg > 1:4997685/1‑101 (MQ=255) tCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTta < 1:1466691/101‑1 (MQ=255) cGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTtat < 1:3726733/101‑1 (MQ=255) cGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTtat > 1:8344696/1‑101 (MQ=255) ttATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATaa > 1:3757410/1‑101 (MQ=255) ataAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATaaaa > 1:7165106/1‑101 (MQ=255) taAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATaaaaa < 1:116671/101‑1 (MQ=255) aaaaaCCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATaaaaaa > 1:7482944/1‑101 (MQ=255) aaaaCCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAg > 1:1762039/1‑101 (MQ=255) aaaaCCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAg > 1:10137540/1‑101 (MQ=255) aaaaCCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAg > 1:1210251/1‑101 (MQ=255) aaaaCCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAg > 1:6900399/1‑101 (MQ=255) aCCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCCAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTc < 1:8715327/101‑1 (MQ=255) ccATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTcc > 1:6128148/1‑101 (MQ=255) ccATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTcc > 1:5786377/1‑101 (MQ=255) aTTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCtt < 1:4793633/101‑1 (MQ=255) aTTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCtt < 1:1923615/101‑1 (MQ=255) ttAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTg > 1:7724263/1‑101 (MQ=255) ttAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTg < 1:7792807/101‑1 (MQ=255) ttAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTg > 1:3047426/1‑101 (MQ=255) taataaATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGc < 1:5309239/101‑1 (MQ=255) aataaATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCt > 1:7360845/1‑101 (MQ=255) aataaATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCt > 1:9425856/1‑101 (MQ=255) aataaATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCt > 1:153294/1‑101 (MQ=255) ataaATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTa < 1:8825397/101‑1 (MQ=255) taaATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTAt < 1:11854945/101‑1 (MQ=255) taaATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTAt < 1:6616109/101‑1 (MQ=255) tGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAAc < 1:356286/101‑1 (MQ=255) aCTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACAt < 1:2010109/101‑1 (MQ=255) aCTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTAAAAAAAAGGTCCTTGCTATGAACAt < 1:10103589/101‑1 (MQ=255) tGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGc < 1:9321723/101‑1 (MQ=255) tGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGc > 1:9758144/1‑101 (MQ=255) ggATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCa > 1:4041608/1‑101 (MQ=255) ggATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCa < 1:10266338/101‑1 (MQ=255) gATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCaa < 1:7099796/101‑1 (MQ=255) aTTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCaaa > 1:7511457/1‑101 (MQ=255) ttGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAAt > 1:5394119/1‑101 (MQ=255) tACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTTTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCAcc < 1:10490092/101‑1 (MQ=255) tGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCaaa < 1:11383892/101‑1 (MQ=255) tGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCaaa > 1:2919033/1‑101 (MQ=255) gCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCaaaa < 1:11507565/101‑1 (MQ=255) gCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCaaaa > 1:6778239/1‑101 (MQ=255) cATTCGCAGGCAAAACCTGACATAACGAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAAt < 1:8163380/101‑1 (MQ=255) ttCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATtc < 1:6948848/101‑1 (MQ=255) ttCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATtc > 1:5684712/1‑101 (MQ=255) aGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTcaac > 1:7620585/1‑101 (MQ=255) ggCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTcaaca > 1:1811939/1‑101 (MQ=255) gCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTcaacaa > 1:750435/1‑101 (MQ=255) cAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACaat < 1:5424400/101‑1 (MQ=255) cAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACaat > 1:44808/1‑101 (MQ=255) aaaaCCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACaata > 1:2063828/1‑101 (MQ=255) aaaCCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACaataa > 1:5565280/1‑101 (MQ=255) aaCCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACaataat > 1:1326087/1‑101 (MQ=255) aCCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAAtg < 1:9897781/101‑1 (MQ=255) aCCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAAtg > 1:7204643/1‑101 (MQ=255) aCCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAAtg > 1:10885997/1‑101 (MQ=255) cTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAAtgtt > 1:6427550/1‑101 (MQ=255) tGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAAtgttg < 1:4116173/101‑1 (MQ=255) gACATAACCGGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAAtgttgt > 1:1730476/1‑101 (MQ=255) gACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAAtgttgt < 1:8510301/101‑1 (MQ=255) aCATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTtgtg > 1:9493717/1‑101 (MQ=255) cATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTgtgg < 1:4672229/101‑1 (MQ=255) cATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAACAATGTTgtgg < 1:6390612/101‑1 (MQ=255) aTAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTgtggt > 1:4607282/1‑101 (MQ=255) aaCCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGtggtgg > 1:10598418/1‑101 (MQ=255) aaCCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGtggtgg > 1:5092070/1‑101 (MQ=255) aaCCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGtggtgg < 1:4208909/101‑1 (MQ=255) aCCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACGATAATGTTGTggtggt < 1:11813746/101‑1 (MQ=255) cAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTa < 1:9090160/101‑1 (MQ=255) agaATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATtg < 1:21390/101‑1 (MQ=255) aaTACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATtgat > 1:11347538/1‑101 (MQ=255) aTACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATtgatg > 1:9836901/1‑101 (MQ=255) aTACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATtgatg > 1:1035956/1‑101 (MQ=255) aTACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATtgatg < 1:3187024/101‑1 (MQ=255) aTACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATtgatg < 1:6276135/101‑1 (MQ=255) tACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATtgatga < 1:9304774/101‑1 (MQ=255) tACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATtgatga > 1:785682/1‑101 (MQ=255) aCTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTgatgat < 1:59073/101‑1 (MQ=255) aCTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTgatgat > 1:622798/1‑101 (MQ=255) cTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATc < 1:11211017/101‑1 (MQ=255) ggTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCaa > 1:3262102/1‑101 (MQ=255) tGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCAACa > 1:10638622/1‑101 (MQ=255) aGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCAACAGCg < 1:10044351/101‑1 (MQ=255) tCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCAACAGCggg > 1:5573474/1‑101 (MQ=255) tCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCAACAGCggg > 1:1174582/1‑101 (MQ=255) cGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCAACAGCGGGa < 1:6002003/101‑1 (MQ=255) TCCGAACCTGGATGTTCGTTATAAAAACCATTAATAAATGACTGGATTGTTACTGCATTCGCAGGCAAAACCTGACATAACCAGAGAATACTGGTGAAGTCGGGTTTTTTTGTTTATAAAAAAGGTCCTTGCTATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCAACAGCGGGA > NC_007779/3729981‑3730181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |