Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_007779	228,001	0	T→A	100.0%	‑0.5	1	noncoding (2243/2904 nt)	rrlH	23S ribosomal RNA
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (0/0):  ref base (1/0):  total (1/0)

CCTTGAAATACCACCCTTTAATGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAG‑GTTGGCTAATCCTGGTCGGACATCAGGAGGTTA  >  NC_007779/227922‑228080                                                                                |                                                                                 ccTTGAAATACCACCCTTTAATGTTTGATGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGAGGTTTGATTGGGGGggcttcccct                                                             >  1:6662667/1‑93 (MQ=14)                                                          gCGGACAGTGTCTGGTGGGTAGTTTGACTGGGG‑GGGCCCCTCCTTAAGAGGAAAGGGGGGGCACGGAGAGTTGG‑TAATTCTTGGCGGGCAttcagagggtt  >  1:6400749/1‑91 (MQ=0)                                                                                |                                                                                 CCTTGAAATACCACCCTTTAATGTTTGATGTTCTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAG‑GTTGGCTAATCCTGGTCGGACATCAGGAGGTTA  >  NC_007779/227922‑228080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.