| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,750,122 | Δ1 bp | 95.9% | coding (365/1416 nt) | tnaA ← | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,750,122 | 0 | C→. | 95.9% | 67.1 ‑0.8 ‑2.6 | 370 | coding (365/1416 nt) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): new base (165/190): ref base (5/10): total (170/200) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.30e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.49e-03 | ||||||||||
Only 100 of 378 total aligned reads displayed.
GATATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGA > NC_007779/3750022‑3750218 | gATATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGc > 1:14191779/1‑101 (MQ=255) tataGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGctt < 1:10353731/101‑3 (MQ=255) tataGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGctt < 1:8959774/101‑3 (MQ=255) taGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttt < 1:8125573/101‑1 (MQ=255) aGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtttt > 1:6230184/1‑101 (MQ=255) aCGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTcc > 1:3037681/1‑101 (MQ=255) aCGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTcc < 1:4165670/101‑1 (MQ=255) gTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTg < 1:619189/101‑1 (MQ=255) ttACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGc > 1:8314501/1‑101 (MQ=255) ttACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGc > 1:13433016/1‑101 (MQ=255) tACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCt < 1:254614/101‑1 (MQ=255) aCGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTc < 1:5066421/101‑1 (MQ=255) aCGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTc < 1:3756204/101‑1 (MQ=255) aCGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTc > 1:15638110/1‑101 (MQ=255) cGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcg > 1:277165/1‑101 (MQ=255) cGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcg < 1:7553816/101‑1 (MQ=255) gCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcgc > 1:5875479/1‑101 (MQ=255) gCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcgc < 1:10708153/101‑1 (MQ=255) cACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcgcg < 1:11233540/101‑1 (MQ=255) cACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcgcg > 1:9253180/1‑101 (MQ=255) cGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtt < 1:10111045/101‑1 (MQ=255) ggTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGttt > 1:6440610/1‑101 (MQ=255) gTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtttt < 1:6916918/101‑1 (MQ=255) gTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtttt < 1:7240425/101‑1 (MQ=255) tACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGttttt < 1:5990470/101‑1 (MQ=255) tACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGttttt < 1:1156033/101‑1 (MQ=255) aCAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtttttt > 1:13362569/1‑101 (MQ=255) cAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTa > 1:6816611/1‑101 (MQ=255) cAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTa < 1:14719557/101‑1 (MQ=255) cAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTa < 1:17820669/101‑1 (MQ=255) aGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTaa > 1:11885489/1‑101 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAg < 1:4334938/101‑1 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAg > 1:7622694/1‑101 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAg < 1:867550/101‑1 (MQ=255) ttGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGt < 1:14568417/101‑1 (MQ=255) gATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTAc < 1:1107259/101‑1 (MQ=255) tCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCg < 1:2177431/101‑1 (MQ=255) cTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCgg < 1:1644726/101‑1 (MQ=255) tGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGa < 1:12317247/101‑1 (MQ=255) gCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAat < 1:5147763/101‑1 (MQ=255) cTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAata > 1:11311308/1‑101 (MQ=255) cTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAata < 1:4833127/101‑1 (MQ=255) tATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAatat < 1:11464865/101‑1 (MQ=255) tATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAatat > 1:7309516/1‑101 (MQ=255) aTGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAAtata > 1:5375991/1‑101 (MQ=255) tGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAg < 1:17177048/101‑1 (MQ=255) ggCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGa < 1:16898712/101‑1 (MQ=255) ggCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGa < 1:3467675/101‑1 (MQ=255) ggCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGa < 1:7831120/101‑1 (MQ=255) gCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGAt < 1:12890109/101‑1 (MQ=255) ccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGAttt < 1:16702120/101‑1 (MQ=255) cTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTg < 1:8480528/101‑1 (MQ=255) cTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCGCGCGTTTTTTAATCAGTACCGGAATATAGATTTg < 1:8848199/101‑1 (MQ=255) tGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGc < 1:465951/101‑1 (MQ=255) tGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGc < 1:7140209/101‑1 (MQ=255) tGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGc < 1:10539483/101‑1 (MQ=255) gCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGct < 1:16277254/101‑1 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct < 1:17781158/101‑1 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct > 1:10810351/1‑101 (MQ=255) tGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTg > 1:16100616/1‑101 (MQ=255) ggTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgc > 1:12433792/1‑101 (MQ=255) tATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgcgc > 1:2046802/1‑101 (MQ=255) tATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgcgc < 1:3162245/101‑1 (MQ=255) tATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgcgc > 1:14852245/1‑101 (MQ=255) aTCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGcc < 1:1435599/101‑1 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc > 1:9149630/1‑101 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc < 1:1926278/101‑1 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc > 1:12708973/1‑101 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc < 1:15938269/101‑1 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg < 1:5255476/101‑1 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg < 1:13766047/101‑1 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAAGATAGATTTGCTCTGCGCCACg > 1:15218726/1‑101 (MQ=255) tAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTgg > 1:2612666/1‑101 (MQ=255) aGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGt < 1:2387359/101‑1 (MQ=255) gTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTg < 1:14599922/101‑1 (MQ=255) ttAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGa < 1:1742223/101‑1 (MQ=255) tAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAg < 1:10003508/101‑1 (MQ=255) gaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCgg < 1:6613469/101‑1 (MQ=255) gCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATg > 1:15013270/1‑101 (MQ=255) ccaccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATgg < 1:15416097/101‑1 (MQ=255) caccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgt > 1:5696230/1‑101 (MQ=255) caccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgt < 1:17547826/101‑1 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt > 1:15551938/1‑101 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt < 1:7459668/101‑1 (MQ=255) caTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTa > 1:11815118/1‑101 (MQ=255) caTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTa > 1:5452857/1‑101 (MQ=255) caTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTa < 1:13652100/101‑1 (MQ=255) aTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAt > 1:14015369/1‑101 (MQ=255) ttttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAtt > 1:12068631/1‑101 (MQ=255) tttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTg < 1:9428663/101‑1 (MQ=255) ttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGa < 1:5779988/101‑1 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa < 1:4251182/101‑1 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa < 1:11765460/101‑1 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc < 1:14489296/101‑1 (MQ=255) gcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAcc > 1:17605757/1‑101 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa > 1:8362328/1‑101 (MQ=255) aTCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaaa > 1:14979957/1‑101 (MQ=255) aTCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaaa < 1:3983338/101‑1 (MQ=255) tCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAg > 1:10875811/1‑101 (MQ=255) tCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAg < 1:9549420/101‑1 (MQ=255) | GATATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGA > NC_007779/3750022‑3750218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |