| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 1907280 = | 11 (0.030) | 344 (0.970) | 148/180 | NT | 96.9% | intergenic (+307/‑122) | yobD/yebN | inner membrane protein/inner membrane protein |
| ? | NC_007779 | = 2412225 | NA (NA) | intergenic (‑55/‑782) | insA/yfbQ | IS1 element protein/aminotransferase | |||||
Only 100 of 881 total aligned reads displayed.
TTTGGGGAGTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGA > NC_007779/1907180‑1907380 | tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccc < 1:11389871‑M1/2‑1 (MQ=255) cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccccc < 1:17610968‑M1/3‑2 (MQ=255) cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccaa < 1:16645285‑M1/3‑3 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccaat < 1:9657318‑M1/4‑4 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccaat > 1:9267730‑M1/98‑98 (MQ=255) gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccccag > 1:1577289‑M1/97‑98 (MQ=255) gggAGTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCata < 1:3917293/101‑1 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatagactaaatcagtaagttggcagcatcaccCCatat > 1:4014116‑M1/96‑101 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccccagg > 1:13621492‑M1/96‑97 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCaatag < 1:10848818‑M1/6‑2 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCatat > 1:14968525‑M1/96‑101 (MQ=255) ggAGTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCatat < 1:7756013/101‑1 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcttacactaaatcagtaagttggcagcatcacccaatagc < 1:7425841‑M1/7‑3 (MQ=255) agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccccaggt < 1:17225847‑M1/7‑6 (MQ=255) gTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGca < 1:12324989/101‑1 (MQ=255) ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccccaggtag < 1:9738919‑M1/9‑8 (MQ=255) ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccaatagcgt < 1:15063916‑M1/9‑5 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccccaggtaga > 1:14715168‑M1/92‑93 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccccaggtaga > 1:791100‑M1/92‑93 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccaatagcgtg < 1:13056251‑M1/10‑6 (MQ=255) tAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAg > 1:16279840‑M1/1‑100 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacgccatcatacactaaatcagtaagttggcagcatcaccCCATATGcaca > 1:17790855‑M1/91‑101 (MQ=255) gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacccccaggtagag < 1:14217518‑M1/11‑10 (MQ=255) gCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggt < 1:7139396‑M1/101‑4 (MQ=255) cGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaa > 1:13219174‑M1/1‑96 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAAt > 1:11579091‑M1/86‑101 (MQ=255) tttCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatga > 1:1871183‑M1/1‑93 (MQ=255) agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCg > 1:15398304‑M1/84‑101 (MQ=255) gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGc > 1:8558049‑M1/83‑101 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTa > 1:6155381‑M1/81‑101 (MQ=255) gATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaa < 1:3400327‑M1/101‑15 (MQ=255) gATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaa < 1:9554831‑M1/101‑15 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGc > 1:15594182‑M1/78‑101 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTg < 1:14573434‑M1/27‑1 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTg > 1:17379049‑M1/75‑101 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTg > 1:8408780‑M1/75‑101 (MQ=255) gAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattg < 1:17022205‑M1/101‑22 (MQ=255) aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAAc < 1:5337242‑M1/34‑1 (MQ=255) gTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagt > 1:10001694‑M1/1‑75 (MQ=255) cGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgtt < 1:14367738‑M1/101‑30 (MQ=255) gtgtCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttt > 1:9832109‑M1/1‑71 (MQ=255) gtgtCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttt > 1:10140032‑M1/1‑71 (MQ=255) gtgtCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttt < 1:11743817‑M1/101‑31 (MQ=255) gtCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgtttta > 1:16899118‑M1/1‑69 (MQ=255) ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAAc < 1:3198289‑M1/42‑1 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagaaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCa > 1:2243075‑M1/58‑101 (MQ=255) aaCATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgt > 1:10637591‑M1/1‑66 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCAt > 1:11870885‑M1/57‑101 (MQ=255) ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCa > 1:14841668‑M1/55‑101 (MQ=255) aTACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttca < 1:16050814‑M1/101‑39 (MQ=255) tACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcag < 1:2456508‑M1/101‑40 (MQ=255) tACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcag > 1:16516134‑M1/1‑62 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCAc > 1:1048883‑M1/54‑101 (MQ=255) tCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagata > 1:2553576‑M1/1‑59 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGc > 1:12672585‑M1/51‑101 (MQ=255) cGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataa > 1:4458580‑M1/1‑58 (MQ=255) cGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataa < 1:4993155‑M1/101‑44 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCtt < 1:6775100‑M1/53‑1 (MQ=255) tGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgc < 1:13706943‑M1/101‑47 (MQ=255) tGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgc < 1:648124‑M1/101‑47 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCttgtt < 1:8219565‑M1/56‑1 (MQ=255) cAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgccc < 1:15925455‑M1/101‑49 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCttgttg > 1:7256978‑M1/45‑101 (MQ=255) aaCGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat < 1:9135492‑M1/101‑52 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCAt > 1:11152340‑M1/40‑101 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCAt < 1:5139257‑M1/62‑1 (MQ=255) gTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAagtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac < 1:7580262‑M1/101‑55 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGt > 1:1750638‑M1/38‑101 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATg > 1:6616645‑M1/35‑101 (MQ=255) aCGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 1:10993642‑M1/1‑42 (MQ=255) cGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc > 1:6428718‑M1/1‑41 (MQ=255) tacactaaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCAt > 1:12911352‑M1/32‑101 (MQ=255) aCGGACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg > 1:7048607‑M1/1‑38 (MQ=255) ctaaatcagtaagttggcagcatcgccCCATATGCACAGCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGttt > 1:8096981‑M1/28‑101 (MQ=255) taaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTg > 1:4196950‑M1/27‑101 (MQ=255) gACTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag > 1:14127865‑M1/1‑35 (MQ=255) aaatcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGc < 1:9386050‑M1/76‑1 (MQ=255) cTGAATACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct > 1:4726217‑M1/1‑33 (MQ=255) tcagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTgg > 1:483406‑M1/23‑101 (MQ=255) cagtaagttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTggg > 1:2887266‑M1/22‑101 (MQ=255) aaTACTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca > 1:13949402‑M1/1‑30 (MQ=255) aCTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg > 1:15177634‑M1/1‑27 (MQ=255) aCTTTCAGTCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg > 1:13356450‑M1/1‑27 (MQ=255) ttCAATCAGGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt > 1:5807738‑M1/1‑24 (MQ=255) ttggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCgatg < 1:12152249‑M1/87‑1 (MQ=255) ggcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCgatgat > 1:2054568‑M1/13‑101 (MQ=255) agtcagGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg < 1:8925927‑M1/101‑81 (MQ=255) gcagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGatgatg > 1:267636‑M1/12‑101 (MQ=255) cagcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGAtgt < 1:10299019‑M1/91‑1 (MQ=255) cagGCGAGACCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga > 1:3556083‑M1/1‑18 (MQ=255) gcatcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATgtgt < 1:5479583‑M1/93‑1 (MQ=255) catcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGtt < 1:8652164‑M1/94‑1 (MQ=255) atcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGttt < 1:7685303‑M1/95‑1 (MQ=255) atcaccCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGttt < 1:3684345‑M1/95‑1 (MQ=255) gagaCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac > 1:12007827‑M1/1‑13 (MQ=255) gagaCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac < 1:6334696‑M1/101‑89 (MQ=255) agaCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca > 1:13535419‑M1/1‑12 (MQ=255) accCCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTAt < 1:4566950‑M1/98‑1 (MQ=255) gaCCATATGCAggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag > 1:5643720‑M1/1‑11 (MQ=255) aCCATATGCAggtaatgcctccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc < 1:12543082‑M1/101‑92 (MQ=255) | TTTGGGGAGTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAATCGCTATGCCTGCATGAACGCGAAAACCATCACGGCTTGTTGTTCATGTATGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGA > NC_007779/1907180‑1907380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |